RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
ATRIP-208ENST00000639561 GYS1P13807 737 aa17.14■□□□□ 0.33
ATRIP-208ENST00000639561 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
ATRIP-208ENST00000639561 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
ATRIP-208ENST00000639561 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
ATRIP-208ENST00000639561 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
ATRIP-208ENST00000639561 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
ATRIP-208ENST00000639561 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
ATRIP-208ENST00000639561 EXOC6BQ9Y2D4 811 aa17.13■□□□□ 0.33
ATRIP-208ENST00000639561 USP42Q9H9J4 1324 aaKnown RBP17.12■□□□□ 0.33
ATRIP-208ENST00000639561 RBM25P49756 843 aaKnown RBP17.12■□□□□ 0.33
ATRIP-208ENST00000639561 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
ATRIP-208ENST00000639561 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
ATRIP-208ENST00000639561 ADCY9O60503 1353 aa17.12■□□□□ 0.33
ATRIP-208ENST00000639561 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
ATRIP-208ENST00000639561 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
ATRIP-208ENST00000639561 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATRIP-208ENST00000639561 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
ATRIP-208ENST00000639561 BEND3Q5T5X7 828 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 ZNF790Q6PG37 636 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
ATRIP-208ENST00000639561 CDC45O75419 566 aa17.1■□□□□ 0.33
ATRIP-208ENST00000639561 STARD3NLO95772 234 aa17.1■□□□□ 0.33
ATRIP-208ENST00000639561 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
ATRIP-208ENST00000639561 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
ATRIP-208ENST00000639561 COL15A1P39059 1388 aa17.1■□□□□ 0.33
ATRIP-208ENST00000639561 ZPR1O75312 459 aa17.1■□□□□ 0.33
ATRIP-208ENST00000639561 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
ATRIP-208ENST00000639561 SRP68Q9UHB9 627 aaKnown RBP17.09■□□□□ 0.33
ATRIP-208ENST00000639561 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.33
ATRIP-208ENST00000639561 TGFB2P61812 414 aa17.08■□□□□ 0.33
ATRIP-208ENST00000639561 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.33
ATRIP-208ENST00000639561 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.33
ATRIP-208ENST00000639561 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
ATRIP-208ENST00000639561 NFKBIBQ15653 356 aa17.08■□□□□ 0.32
ATRIP-208ENST00000639561 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
ATRIP-208ENST00000639561 SDSP20132 328 aa17.07■□□□□ 0.32
ATRIP-208ENST00000639561 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
ATRIP-208ENST00000639561 KIF2CQ99661 725 aa17.07■□□□□ 0.32
ATRIP-208ENST00000639561 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
ATRIP-208ENST00000639561 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
ATRIP-208ENST00000639561 NARFQ9UHQ1 456 aa17.07■□□□□ 0.32
ATRIP-208ENST00000639561 A0A087WZG4 1122 aa17.06■□□□□ 0.32
ATRIP-208ENST00000639561 SSH3Q8TE77 659 aa17.06■□□□□ 0.32
ATRIP-208ENST00000639561 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
ATRIP-208ENST00000639561 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
ATRIP-208ENST00000639561 PDE1AP54750 535 aa17.06■□□□□ 0.32
ATRIP-208ENST00000639561 PDIA6Q15084 440 aa17.06■□□□□ 0.32
ATRIP-208ENST00000639561 USPL1Q5W0Q7 1092 aa17.05■□□□□ 0.32
ATRIP-208ENST00000639561 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
ATRIP-208ENST00000639561 SCN7AQ01118 1682 aa17.05■□□□□ 0.32
ATRIP-208ENST00000639561 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
ATRIP-208ENST00000639561 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
ATRIP-208ENST00000639561 POLA2Q14181 598 aa17.04■□□□□ 0.32
ATRIP-208ENST00000639561 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
ATRIP-208ENST00000639561 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
ATRIP-208ENST00000639561 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATRIP-208ENST00000639561 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
ATRIP-208ENST00000639561 AFDNP55196 1824 aaKnown RBP17.03■□□□□ 0.32
ATRIP-208ENST00000639561 NRXN2Q9P2S2 1712 aa17.03■□□□□ 0.32
ATRIP-208ENST00000639561 TM4SF1P30408 202 aa17.03■□□□□ 0.32
ATRIP-208ENST00000639561 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
ATRIP-208ENST00000639561 DDR1Q08345 913 aa17.03■□□□□ 0.32
ATRIP-208ENST00000639561 POLRMTO00411 1230 aaKnown RBP17.02■□□□□ 0.31
ATRIP-208ENST00000639561 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.31
ATRIP-208ENST00000639561 ARFGEF1Q9Y6D6 1849 aa17.02■□□□□ 0.31
ATRIP-208ENST00000639561 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
ATRIP-208ENST00000639561 SRGAP3O43295 1099 aa17.01■□□□□ 0.31
ATRIP-208ENST00000639561 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
ATRIP-208ENST00000639561 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
ATRIP-208ENST00000639561 MX1P20591 662 aa17.01■□□□□ 0.31
ATRIP-208ENST00000639561 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
ATRIP-208ENST00000639561 BCORQ6W2J9 1755 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 A0A0G2JLW4 131 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 ALDH1L1O75891 902 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
ATRIP-208ENST00000639561 DPEP1P16444 411 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 DEKP35659 375 aaKnown RBP17■□□□□ 0.31
ATRIP-208ENST00000639561 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
ATRIP-208ENST00000639561 NFIXQ14938 502 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
ATRIP-208ENST00000639561 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
ATRIP-208ENST00000639561 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
ATRIP-208ENST00000639561 SNX21Q969T3 373 aa16.99■□□□□ 0.31
ATRIP-208ENST00000639561 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
ATRIP-208ENST00000639561 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
ATRIP-208ENST00000639561 ZNF330Q9Y3S2 320 aaPredicted RBP16.99■□□□□ 0.31
ATRIP-208ENST00000639561 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
ATRIP-208ENST00000639561 MYL6BP14649 208 aa16.98■□□□□ 0.31
ATRIP-208ENST00000639561 LRP10Q7Z4F1 713 aa16.98■□□□□ 0.31
ATRIP-208ENST00000639561 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
ATRIP-208ENST00000639561 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
ATRIP-208ENST00000639561 MTX1Q13505 466 aa16.97■□□□□ 0.31
ATRIP-208ENST00000639561 LINS1Q8NG48 757 aa16.97■□□□□ 0.31
ATRIP-208ENST00000639561 USP26Q9BXU7 913 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms