RNA–Protein interactions for RNA: ENST00000639358.1

KCNQ3-207, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-207ENST00000639358 RPGRQ92834 1020 aaKnown RBP17.72■□□□□ 0.43
KCNQ3-207ENST00000639358 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
KCNQ3-207ENST00000639358 BCORQ6W2J9 1755 aa17.71■□□□□ 0.43
KCNQ3-207ENST00000639358 TRAF5O00463 557 aa17.71■□□□□ 0.43
KCNQ3-207ENST00000639358 AOC2O75106 756 aa17.71■□□□□ 0.43
KCNQ3-207ENST00000639358 CRY2Q49AN0 593 aa17.71■□□□□ 0.43
KCNQ3-207ENST00000639358 MCOLN1Q9GZU1 580 aa17.71■□□□□ 0.43
KCNQ3-207ENST00000639358 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 HLFQ16534 295 aa17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
KCNQ3-207ENST00000639358 PER1O15534 1290 aaPredicted RBP17.69■□□□□ 0.42
KCNQ3-207ENST00000639358 SAPCD2Q86UD0 394 aa17.69■□□□□ 0.42
KCNQ3-207ENST00000639358 HHIPL1Q96JK4 782 aa17.69■□□□□ 0.42
KCNQ3-207ENST00000639358 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
KCNQ3-207ENST00000639358 CELF2O95319 508 aaKnown RBP17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 HOXA10P31260 410 aaPredicted RBP17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 PRKAR2BP31323 418 aa17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
KCNQ3-207ENST00000639358 SNED1Q8TER0 1413 aa17.67■□□□□ 0.42
KCNQ3-207ENST00000639358 VPS33BQ9H267 617 aa17.67■□□□□ 0.42
KCNQ3-207ENST00000639358 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
KCNQ3-207ENST00000639358 THSD7BQ9C0I4 1608 aa17.67■□□□□ 0.42
KCNQ3-207ENST00000639358 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
KCNQ3-207ENST00000639358 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
KCNQ3-207ENST00000639358 DGKZQ13574 1117 aa17.66■□□□□ 0.42
KCNQ3-207ENST00000639358 MCM10Q7L590 875 aa17.66■□□□□ 0.42
KCNQ3-207ENST00000639358 CRAMP1Q96RY5 1269 aa17.66■□□□□ 0.42
KCNQ3-207ENST00000639358 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
KCNQ3-207ENST00000639358 TCERG1O14776 1098 aaKnown RBP17.65■□□□□ 0.42
KCNQ3-207ENST00000639358 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
KCNQ3-207ENST00000639358 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
KCNQ3-207ENST00000639358 NGEFQ8N5V2 710 aa17.65■□□□□ 0.42
KCNQ3-207ENST00000639358 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
KCNQ3-207ENST00000639358 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
KCNQ3-207ENST00000639358 ZNF408Q9H9D4 720 aa17.64■□□□□ 0.41
KCNQ3-207ENST00000639358 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
KCNQ3-207ENST00000639358 ABCC12Q96J65 1359 aa17.64■□□□□ 0.41
KCNQ3-207ENST00000639358 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 NOGQ13253 232 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 CIAPIN1Q6FI81 312 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 ZC3H15Q8WU90 426 aaKnown RBP17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 ZNRF3Q9ULT6 936 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 COL4A5P29400 1685 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 LTBP1Q14766 1721 aa17.63■□□□□ 0.41
KCNQ3-207ENST00000639358 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 CXCL9Q07325 125 aa17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 AOC3Q16853 763 aa17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 CDC37L1Q7L3B6 337 aa17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 GLIS2Q9BZE0 524 aaPredicted RBP17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 PGAP2Q9UHJ9 254 aa17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 MAP3K15Q6ZN16 1313 aa17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 NPC1L1Q9UHC9 1359 aa17.62■□□□□ 0.41
KCNQ3-207ENST00000639358 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
KCNQ3-207ENST00000639358 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
KCNQ3-207ENST00000639358 GPTP24298 496 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 TNIP1Q15025 636 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
KCNQ3-207ENST00000639358 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
KCNQ3-207ENST00000639358 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
KCNQ3-207ENST00000639358 ZBTB3Q9H5J0 574 aa17.58■□□□□ 0.4
KCNQ3-207ENST00000639358 UBN2Q6ZU65 1347 aa17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 H7C1D1 291 aa17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 HUNKP57058 714 aa17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 DPP8Q6V1X1 898 aaPredicted RBP17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 TTLL7Q6ZT98 887 aa17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 RTFDC1Q9BY42 306 aaPredicted RBP17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
KCNQ3-207ENST00000639358 BBOX1O75936 387 aa17.56■□□□□ 0.4
KCNQ3-207ENST00000639358 MYL6BP14649 208 aa17.56■□□□□ 0.4
KCNQ3-207ENST00000639358 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
KCNQ3-207ENST00000639358 CNOT7Q9UIV1 285 aaKnown RBP17.56■□□□□ 0.4
KCNQ3-207ENST00000639358 CASP8AP2Q9UKL3 1982 aa17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 RAD17O75943 681 aa17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 NTSR2O95665 410 aa17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 HIRAP54198 1017 aaPredicted RBP17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
KCNQ3-207ENST00000639358 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms