RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
SPIN3-220ENST00000639257 CNKSR1Q969H4 720 aa23.05■■□□□ 1.28
SPIN3-220ENST00000639257 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
SPIN3-220ENST00000639257 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
SPIN3-220ENST00000639257 UTP14AQ9BVJ6 771 aaKnown RBP23.04■■□□□ 1.28
SPIN3-220ENST00000639257 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
SPIN3-220ENST00000639257 SBF1O95248 1867 aa23.04■■□□□ 1.28
SPIN3-220ENST00000639257 FER1L6Q2WGJ9 1857 aa23.03■■□□□ 1.28
SPIN3-220ENST00000639257 EXOSC9Q06265 439 aaKnown RBP23.03■■□□□ 1.28
SPIN3-220ENST00000639257 ARHGAP27Q6ZUM4 889 aa23.03■■□□□ 1.28
SPIN3-220ENST00000639257 ZNF622Q969S3 477 aaKnown RBP eCLIP23.03■■□□□ 1.28
SPIN3-220ENST00000639257 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
SPIN3-220ENST00000639257 HOXA10P31260 410 aaPredicted RBP23.02■■□□□ 1.28
SPIN3-220ENST00000639257 PRPF40BQ6NWY9 871 aaKnown RBP23.01■■□□□ 1.27
SPIN3-220ENST00000639257 MIER1Q8N108 512 aa23.01■■□□□ 1.27
SPIN3-220ENST00000639257 SNED1Q8TER0 1413 aa23■■□□□ 1.27
SPIN3-220ENST00000639257 NFKBIEO00221 500 aa23■■□□□ 1.27
SPIN3-220ENST00000639257 C3orf67Q6ZVT6 689 aa23■■□□□ 1.27
SPIN3-220ENST00000639257 CACNA1SQ13698 1873 aa23■■□□□ 1.27
SPIN3-220ENST00000639257 LAMB2P55268 1798 aa22.99■■□□□ 1.27
SPIN3-220ENST00000639257 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
SPIN3-220ENST00000639257 DDX60Q8IY21 1712 aaKnown RBP22.99■■□□□ 1.27
SPIN3-220ENST00000639257 PRELPP51888 382 aa22.98■■□□□ 1.27
SPIN3-220ENST00000639257 RIC3Q7Z5B4 369 aa22.98■■□□□ 1.27
SPIN3-220ENST00000639257 METTL22Q9BUU2 404 aaPredicted RBP22.98■■□□□ 1.27
SPIN3-220ENST00000639257 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
SPIN3-220ENST00000639257 LTBP3Q9NS15 1303 aa22.98■■□□□ 1.27
SPIN3-220ENST00000639257 C21orf2O43822 256 aa22.97■■□□□ 1.27
SPIN3-220ENST00000639257 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
SPIN3-220ENST00000639257 SLC4A2P04920 1241 aa22.97■■□□□ 1.27
SPIN3-220ENST00000639257 ALDH1B1P30837 517 aa22.97■■□□□ 1.27
SPIN3-220ENST00000639257 KSR2Q6VAB6 950 aa22.97■■□□□ 1.27
SPIN3-220ENST00000639257 G2E3Q7L622 706 aa22.97■■□□□ 1.27
SPIN3-220ENST00000639257 TRMT2AQ8IZ69 625 aaKnown RBP22.97■■□□□ 1.27
SPIN3-220ENST00000639257 SYNE4Q8N205 404 aa22.97■■□□□ 1.27
SPIN3-220ENST00000639257 TRMT112Q9UI30 125 aaKnown RBP22.97■■□□□ 1.27
SPIN3-220ENST00000639257 E9PSI1 815 aa22.96■■□□□ 1.27
SPIN3-220ENST00000639257 ATP5J2-PTCD1G3V325 749 aa22.96■■□□□ 1.27
SPIN3-220ENST00000639257 SLFN5Q08AF3 891 aa22.96■■□□□ 1.27
SPIN3-220ENST00000639257 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
SPIN3-220ENST00000639257 CRAMP1Q96RY5 1269 aa22.96■■□□□ 1.27
SPIN3-220ENST00000639257 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
SPIN3-220ENST00000639257 RASSF7Q02833 373 aa22.95■■□□□ 1.26
SPIN3-220ENST00000639257 C9orf131Q5VYM1 1079 aa22.95■■□□□ 1.26
SPIN3-220ENST00000639257 CCDC191Q8NCU4 936 aa22.95■■□□□ 1.26
SPIN3-220ENST00000639257 NLRP3Q96P20 1036 aa22.95■■□□□ 1.26
SPIN3-220ENST00000639257 ZC3H4Q9UPT8 1303 aaKnown RBP22.94■■□□□ 1.26
SPIN3-220ENST00000639257 PI4KAP2A4QPH2 592 aa22.94■■□□□ 1.26
SPIN3-220ENST00000639257 FLIIQ13045 1269 aa22.94■■□□□ 1.26
SPIN3-220ENST00000639257 PI4KAP1Q8N8J0 262 aa22.94■■□□□ 1.26
SPIN3-220ENST00000639257 MAP3K2Q9Y2U5 619 aa22.94■■□□□ 1.26
SPIN3-220ENST00000639257 LMNB1P20700 586 aa22.93■■□□□ 1.26
SPIN3-220ENST00000639257 MYD88Q99836 296 aa22.93■■□□□ 1.26
SPIN3-220ENST00000639257 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
SPIN3-220ENST00000639257 HCLS1P14317 486 aaPredicted RBP22.92■■□□□ 1.26
SPIN3-220ENST00000639257 ZBTB38Q8NAP3 1195 aaPredicted RBP22.92■■□□□ 1.26
SPIN3-220ENST00000639257 RPGRQ92834 1020 aaKnown RBP22.92■■□□□ 1.26
SPIN3-220ENST00000639257 DICER1Q9UPY3 1922 aaKnown RBP22.92■■□□□ 1.26
SPIN3-220ENST00000639257 SF3B3Q15393 1217 aaKnown RBP22.91■■□□□ 1.26
SPIN3-220ENST00000639257 FAM89AQ96GI7 184 aa22.91■■□□□ 1.26
SPIN3-220ENST00000639257 RBM17Q96I25 401 aaKnown RBP22.91■■□□□ 1.26
SPIN3-220ENST00000639257 CCDC88AQ3V6T2 1871 aa22.91■■□□□ 1.26
SPIN3-220ENST00000639257 PCCAP05165 728 aaPredicted RBP22.9■■□□□ 1.26
SPIN3-220ENST00000639257 CCDC93Q567U6 631 aa22.9■■□□□ 1.26
SPIN3-220ENST00000639257 CDCA7LQ96GN5 454 aa22.9■■□□□ 1.26
SPIN3-220ENST00000639257 RNF181Q9P0P0 153 aa22.9■■□□□ 1.26
SPIN3-220ENST00000639257 CC2D2BQ6DHV5 1058 aa22.89■■□□□ 1.25
SPIN3-220ENST00000639257 TAOK3Q9H2K8 898 aa22.89■■□□□ 1.25
SPIN3-220ENST00000639257 CWC25Q9NXE8 425 aaPredicted RBP22.89■■□□□ 1.25
SPIN3-220ENST00000639257 TIAM2Q8IVF5 1701 aa22.88■■□□□ 1.25
SPIN3-220ENST00000639257 ABCC4O15439 1325 aa22.88■■□□□ 1.25
SPIN3-220ENST00000639257 OLFM4Q6UX06 510 aa22.88■■□□□ 1.25
SPIN3-220ENST00000639257 ZNF219Q9P2Y4 722 aaPredicted RBP22.88■■□□□ 1.25
SPIN3-220ENST00000639257 CDHR2Q9BYE9 1310 aa22.87■■□□□ 1.25
SPIN3-220ENST00000639257 NEURL1BA8MQ27 555 aa22.87■■□□□ 1.25
SPIN3-220ENST00000639257 IRS4O14654 1257 aaPredicted RBP22.87■■□□□ 1.25
SPIN3-220ENST00000639257 RTKN2Q8IZC4 609 aa22.87■■□□□ 1.25
SPIN3-220ENST00000639257 ZNF428Q96B54 188 aa22.87■■□□□ 1.25
SPIN3-220ENST00000639257 LRRC37AA6NMS7 1700 aa22.86■■□□□ 1.25
SPIN3-220ENST00000639257 FKBP4Q02790 459 aaKnown RBP eCLIP22.86■■□□□ 1.25
SPIN3-220ENST00000639257 FKBP5Q13451 457 aaPredicted RBP22.86■■□□□ 1.25
SPIN3-220ENST00000639257 GRIPAP1Q4V328 841 aa22.86■■□□□ 1.25
SPIN3-220ENST00000639257 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
SPIN3-220ENST00000639257 PSMD1Q99460 953 aa22.86■■□□□ 1.25
SPIN3-220ENST00000639257 COL4A1P02462 1669 aa22.85■■□□□ 1.25
SPIN3-220ENST00000639257 PPEF1O14829 653 aaPredicted RBP22.85■■□□□ 1.25
SPIN3-220ENST00000639257 NEXNQ0ZGT2 675 aa22.85■■□□□ 1.25
SPIN3-220ENST00000639257 BBOX1O75936 387 aa22.84■■□□□ 1.25
SPIN3-220ENST00000639257 CWF19L2Q2TBE0 894 aaKnown RBP22.84■■□□□ 1.25
SPIN3-220ENST00000639257 LINS1Q8NG48 757 aa22.84■■□□□ 1.25
SPIN3-220ENST00000639257 GPBP1L1Q9HC44 474 aaPredicted RBP22.84■■□□□ 1.25
SPIN3-220ENST00000639257 ATP6V0A2Q9Y487 856 aa22.84■■□□□ 1.25
SPIN3-220ENST00000639257 CT47B1P0C2W7 299 aaPredicted RBP22.83■■□□□ 1.25
SPIN3-220ENST00000639257 HSP90B1P14625 803 aaKnown RBP22.83■■□□□ 1.25
SPIN3-220ENST00000639257 GRAPQ13588 217 aa22.83■■□□□ 1.25
SPIN3-220ENST00000639257 SLC51AQ86UW1 340 aa22.83■■□□□ 1.25
SPIN3-220ENST00000639257 GRAPLQ8TC17 118 aaPredicted RBP22.83■■□□□ 1.25
SPIN3-220ENST00000639257 TAF1P21675 1872 aa22.83■■□□□ 1.24
SPIN3-220ENST00000639257 H7C1W4 665 aa22.82■■□□□ 1.24
SPIN3-220ENST00000639257 CASP7P55210 303 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms