RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 AGGF1Q8N302 714 aaeCLIP3.7□□□□□ -1.82
LMBR1-222ENST00000638959 CEP63Q96MT8 703 aa3.7□□□□□ -1.82
LMBR1-222ENST00000638959 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.7□□□□□ -1.82
LMBR1-222ENST00000638959 IQSEC3Q9UPP2 1182 aaPredicted RBP3.7□□□□□ -1.82
LMBR1-222ENST00000638959 DOLKQ9UPQ8 538 aa3.7□□□□□ -1.82
LMBR1-222ENST00000638959 KCNH4Q9UQ05 1017 aa3.7□□□□□ -1.82
LMBR1-222ENST00000638959 CDK2AP1O14519 115 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 CPB1P15086 417 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 PDE4DQ08499 809 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 OXLD1Q5BKU9 147 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 RNF43Q68DV7 783 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 Q6ZS46 218 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 FAM35AQ86V20 835 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 TRIM42Q8IWZ5 723 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 TMEM130Q8N3G9 435 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 PROCA1Q8NCQ7 364 aaPredicted RBP3.69□□□□□ -1.82
LMBR1-222ENST00000638959 C7orf69Q9H7B7 122 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 JAG2Q9Y219 1238 aa3.69□□□□□ -1.82
LMBR1-222ENST00000638959 HMX2A2RU54 273 aa3.68□□□□□ -1.82
LMBR1-222ENST00000638959 A6NJY4 79 aa3.68□□□□□ -1.82
LMBR1-222ENST00000638959 FARP2O94887 1054 aaPredicted RBP3.68□□□□□ -1.82
LMBR1-222ENST00000638959 HOXA10P31260 410 aaPredicted RBP3.68□□□□□ -1.82
LMBR1-222ENST00000638959 SKIV2LQ15477 1246 aaKnown RBP3.68□□□□□ -1.82
LMBR1-222ENST00000638959 GRIK5Q16478 980 aa3.68□□□□□ -1.82
LMBR1-222ENST00000638959 SHKBP1Q8TBC3 707 aa3.68□□□□□ -1.82
LMBR1-222ENST00000638959 UTP4Q969X6 686 aaKnown RBP3.68□□□□□ -1.82
LMBR1-222ENST00000638959 SIRT1Q96EB6 747 aa3.68□□□□□ -1.82
LMBR1-222ENST00000638959 AK7Q96M32 723 aa3.68□□□□□ -1.82
LMBR1-222ENST00000638959 EML1O00423 815 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 KCNQ4P56696 695 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 MTFR1Q15390 333 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 KSR1Q8IVT5 923 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 ARMC10Q8N2F6 343 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 RHPN1Q8TCX5 695 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 ZC3H15Q8WU90 426 aaKnown RBP3.67□□□□□ -1.82
LMBR1-222ENST00000638959 FBXL18Q96ME1 805 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 PNMA5Q96PV4 448 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 UBL7Q96S82 380 aaPredicted RBP3.67□□□□□ -1.82
LMBR1-222ENST00000638959 LPIN3Q9BQK8 851 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 CEP126Q9P2H0 1117 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 CCDC39Q9UFE4 941 aa3.67□□□□□ -1.82
LMBR1-222ENST00000638959 GPC6Q9Y625 555 aaPredicted RBP3.67□□□□□ -1.82
LMBR1-222ENST00000638959 BRPF1P55201 1214 aaPredicted RBP3.66□□□□□ -1.82
LMBR1-222ENST00000638959 PLAURQ03405 335 aa3.66□□□□□ -1.82
LMBR1-222ENST00000638959 L3MBTL2Q969R5 705 aa3.66□□□□□ -1.82
LMBR1-222ENST00000638959 HSH2DQ96JZ2 352 aa3.66□□□□□ -1.82
LMBR1-222ENST00000638959 FRRS1LQ9P0K9 344 aa3.66□□□□□ -1.82
LMBR1-222ENST00000638959 ZNF232Q9UNY5 417 aa3.66□□□□□ -1.82
LMBR1-222ENST00000638959 WDR64B1ANS9 1081 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 TYRO3Q06418 890 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 TSGA10IPQ3SY00 556 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 SH3D19Q5HYK7 790 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 AMER1Q5JTC6 1135 aaPredicted RBP3.65□□□□□ -1.83
LMBR1-222ENST00000638959 ELMSAN1Q6PJG2 1045 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 VSIG10LQ86VR7 867 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 ZDHHC1Q8WTX9 485 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 SLC38A3Q99624 504 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 CEP41Q9BYV8 373 aa3.65□□□□□ -1.83
LMBR1-222ENST00000638959 SFI1A8K8P3 1242 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 PAPLNO95428 1278 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 NFKB1P19838 968 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 RFC5P40937 340 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 UVSSAQ2YD98 709 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 PERM1Q5SV97 790 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.64□□□□□ -1.83
LMBR1-222ENST00000638959 SLC4A9Q96Q91 983 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 EFCC1Q9HA90 598 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 PIM2Q9P1W9 311 aa3.64□□□□□ -1.83
LMBR1-222ENST00000638959 TMEM229AB2RXF0 380 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 NOS2P35228 1153 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 COL19A1Q14993 1142 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 PCSK7Q16549 785 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 TMEM132AQ24JP5 1023 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 DCAF11Q8TEB1 546 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 GJD4Q96KN9 370 aaPredicted RBP3.63□□□□□ -1.83
LMBR1-222ENST00000638959 ANKIB1Q9P2G1 1089 aa3.63□□□□□ -1.83
LMBR1-222ENST00000638959 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.63□□□□□ -1.83
LMBR1-222ENST00000638959 TEAD4Q15561 434 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 MSMPQ1L6U9 139 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 SLFNL1Q499Z3 407 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 AGBL5Q8NDL9 886 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 TOX2Q96NM4 488 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 CSRNP1Q96S65 589 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 SMG9Q9H0W8 520 aaKnown RBP3.62□□□□□ -1.83
LMBR1-222ENST00000638959 KCNF1Q9H3M0 494 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 LEMD3Q9Y2U8 911 aa3.62□□□□□ -1.83
LMBR1-222ENST00000638959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.62□□□□□ -1.83
LMBR1-222ENST00000638959 BIN1O00499 593 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 PRNPP04156 253 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 MLLT1Q03111 559 aaPredicted RBP3.61□□□□□ -1.83
LMBR1-222ENST00000638959 NFXL1Q6ZNB6 911 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 ACAD11Q709F0 780 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 FLCNQ8NFG4 579 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 C7orf43Q8WVR3 580 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 MYRFLQ96LU7 910 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 SRA1Q9HD15 236 aaKnown RBP3.61□□□□□ -1.83
LMBR1-222ENST00000638959 ATG3Q9NT62 314 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 LMCD1Q9NZU5 365 aa3.61□□□□□ -1.83
LMBR1-222ENST00000638959 SCHIP1Q9P0W5 487 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms