RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 TULP2O00295 520 aa8.48□□□□□ -1.05
NECAP1-213ENST00000638883 LEKR1Q6ZMV7 388 aa8.48□□□□□ -1.05
NECAP1-213ENST00000638883 CCDC9Q9Y3X0 531 aaKnown RBP8.48□□□□□ -1.05
NECAP1-213ENST00000638883 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
NECAP1-213ENST00000638883 TNS1Q9HBL0 1735 aaKnown RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 PAXBP1Q9Y5B6 917 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 IRF6O14896 467 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 GYS2P54840 703 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 SART3Q15020 963 aaKnown RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 UVSSAQ2YD98 709 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 SYT10Q6XYQ8 523 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 MNS1Q8NEH6 495 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 ARAP2Q8WZ64 1704 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 MYO1CO00159 1063 aa8.47□□□□□ -1.05
NECAP1-213ENST00000638883 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 NAA30Q147X3 362 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 TRMT2AQ8IZ69 625 aaKnown RBP8.47□□□□□ -1.05
NECAP1-213ENST00000638883 NOL8Q76FK4 1167 aaKnown RBP8.46□□□□□ -1.05
NECAP1-213ENST00000638883 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
NECAP1-213ENST00000638883 SETQ01105 290 aaPredicted RBP8.46□□□□□ -1.06
NECAP1-213ENST00000638883 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.06
NECAP1-213ENST00000638883 CCDC102AQ96A19 550 aa8.46□□□□□ -1.06
NECAP1-213ENST00000638883 OS9Q13438 667 aaPredicted RBP8.46□□□□□ -1.06
NECAP1-213ENST00000638883 CASC1Q6TDU7 716 aa8.46□□□□□ -1.06
NECAP1-213ENST00000638883 GPT2Q8TD30 523 aa8.46□□□□□ -1.06
NECAP1-213ENST00000638883 TMEM2Q9UHN6 1383 aa8.46□□□□□ -1.06
NECAP1-213ENST00000638883 RABEP1Q15276 862 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 ZSCAN26Q16670 478 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 ANKRD20A12PQ8NF67 263 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 ANKRD45Q5TZF3 282 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-213ENST00000638883 TMEM132EQ6IEE7 984 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 ABCC11Q96J66 1382 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 ST7Q9NRC1 585 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 ARFGEF2Q9Y6D5 1785 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 BRWD3Q6RI45 1802 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 GUCY2CP25092 1073 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 LMAN1P49257 510 aa8.45□□□□□ -1.06
NECAP1-213ENST00000638883 C14orf93Q9H972 538 aaKnown RBP8.45□□□□□ -1.06
NECAP1-213ENST00000638883 LTBP1Q14766 1721 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 MAP2K2P36507 400 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 CT47A1Q5JQC4 288 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-213ENST00000638883 TMCO3Q6UWJ1 677 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 SSR1P43307 286 aaKnown RBP8.44□□□□□ -1.06
NECAP1-213ENST00000638883 MNAT1P51948 309 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 SATB1Q01826 763 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 LRCH2Q5VUJ6 765 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 PYCARDQ9ULZ3 195 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 TNNQ9UQP3 1299 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 C4AP0C0L4 1744 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 C4BP0C0L5 1744 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 CYP2C19P33261 490 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 CDCA8Q53HL2 280 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 CEP135Q66GS9 1140 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 KIAA1524Q8TCG1 905 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 MS4A3Q96HJ5 214 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 TRIM5Q9C035 493 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 SLC12A5Q9H2X9 1139 aa8.44□□□□□ -1.06
NECAP1-213ENST00000638883 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-213ENST00000638883 SKIDA1Q1XH10 827 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 DNAAF4Q8WXU2 420 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 SPTLC3Q9NUV7 552 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 LAMB1P07942 1786 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 CTIFO43310 598 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 REC8O95072 547 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 PTGDRQ13258 359 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 PTPN14Q15678 1187 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 ELF2Q15723 593 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 GDPD2Q9HCC8 539 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 TRAK1Q9UPV9 953 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 RRP7AQ9Y3A4 280 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 GNL2Q13823 731 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 ZRSR1Q15695 479 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 ZKSCAN2Q63HK3 967 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 MICALL2Q8IY33 904 aa8.43□□□□□ -1.06
NECAP1-213ENST00000638883 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 GOLGB1Q14789 3259 aaKnown RBP8.43□□□□□ -1.06
NECAP1-213ENST00000638883 PKP1Q13835 747 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 PPP2R5AQ15172 486 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 SYCP1Q15431 976 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 GORABQ5T7V8 394 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 GIMAP7Q8NHV1 300 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 CHAMP1Q96JM3 812 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 KDM4AO75164 1064 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 ZNF853P0CG23 659 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 CARD10Q9BWT7 1032 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 CXorf56Q9H5V9 222 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
NECAP1-213ENST00000638883 MINK1Q8N4C8 1332 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-213ENST00000638883 RIMS2Q9UQ26 1411 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms