RNA–Protein interactions for RNA: ENST00000638578.1

STRADA-228, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-228ENST00000638578 MAP1SQ66K74 1059 aaPredicted RBP10.17□□□□□ -0.78
STRADA-228ENST00000638578 JDP2Q8WYK2 163 aa10.17□□□□□ -0.78
STRADA-228ENST00000638578 DDX21Q9NR30 783 aaKnown RBP eCLIP10.17□□□□□ -0.78
STRADA-228ENST00000638578 ZNF277Q9NRM2 450 aaPredicted RBP10.17□□□□□ -0.78
STRADA-228ENST00000638578 SNED1Q8TER0 1413 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 CCDC85CA6NKD9 419 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 CA12O43570 354 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 DIAPH1O60610 1272 aaKnown RBP10.16□□□□□ -0.78
STRADA-228ENST00000638578 ALDH1B1P30837 517 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 TPTE2Q6XPS3 522 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 CAPNS2Q96L46 248 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 PSMD1Q99460 953 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 COL3A1P02461 1466 aaPredicted RBP10.16□□□□□ -0.78
STRADA-228ENST00000638578 RIC1Q4ADV7 1423 aa10.16□□□□□ -0.78
STRADA-228ENST00000638578 DLG5Q8TDM6 1919 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 CEMIPQ8WUJ3 1361 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 PDE4DIPQ5VU43 2346 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 A1BGP04217 495 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 MAP2K2P36507 400 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 EIF6P56537 245 aaKnown RBP10.15□□□□□ -0.78
STRADA-228ENST00000638578 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
STRADA-228ENST00000638578 GPR101Q96P66 508 aaPredicted RBP10.15□□□□□ -0.78
STRADA-228ENST00000638578 LAMB2P55268 1798 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 ANKRD36CQ5JPF3 1778 aa10.15□□□□□ -0.78
STRADA-228ENST00000638578 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
STRADA-228ENST00000638578 DDX60Q8IY21 1712 aaKnown RBP10.14□□□□□ -0.79
STRADA-228ENST00000638578 USP50Q70EL3 339 aaPredicted RBP10.14□□□□□ -0.79
STRADA-228ENST00000638578 SYNE4Q8N205 404 aa10.14□□□□□ -0.79
STRADA-228ENST00000638578 COL4A5P29400 1685 aa10.14□□□□□ -0.79
STRADA-228ENST00000638578 TNRC18O15417 2968 aaPredicted RBP10.14□□□□□ -0.79
STRADA-228ENST00000638578 AMER1Q5JTC6 1135 aaPredicted RBP10.13□□□□□ -0.79
STRADA-228ENST00000638578 IL17REQ8NFR9 667 aa10.13□□□□□ -0.79
STRADA-228ENST00000638578 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
STRADA-228ENST00000638578 NIP7Q9Y221 180 aaKnown RBP eCLIP10.13□□□□□ -0.79
STRADA-228ENST00000638578 TLL2Q9Y6L7 1015 aa10.13□□□□□ -0.79
STRADA-228ENST00000638578 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
STRADA-228ENST00000638578 HSPA5P11021 654 aaKnown RBP10.12□□□□□ -0.79
STRADA-228ENST00000638578 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
STRADA-228ENST00000638578 CYP4F22Q6NT55 531 aa10.12□□□□□ -0.79
STRADA-228ENST00000638578 NYXQ9GZU5 481 aa10.12□□□□□ -0.79
STRADA-228ENST00000638578 GJA3Q9Y6H8 435 aa10.12□□□□□ -0.79
STRADA-228ENST00000638578 IBTKQ9P2D0 1353 aaPredicted RBP10.12□□□□□ -0.79
STRADA-228ENST00000638578 POLR2AP24928 1970 aaKnown RBP10.12□□□□□ -0.79
STRADA-228ENST00000638578 SCNN1DP51172 638 aa10.11□□□□□ -0.79
STRADA-228ENST00000638578 BRPF1P55201 1214 aaPredicted RBP10.11□□□□□ -0.79
STRADA-228ENST00000638578 GRM1Q13255 1194 aa10.11□□□□□ -0.79
STRADA-228ENST00000638578 CRY2Q49AN0 593 aa10.11□□□□□ -0.79
STRADA-228ENST00000638578 OLFM4Q6UX06 510 aa10.11□□□□□ -0.79
STRADA-228ENST00000638578 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
STRADA-228ENST00000638578 MIER1Q8N108 512 aa10.1□□□□□ -0.79
STRADA-228ENST00000638578 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
STRADA-228ENST00000638578 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
STRADA-228ENST00000638578 MCOLN1Q9GZU1 580 aa10.1□□□□□ -0.79
STRADA-228ENST00000638578 USP16Q9Y5T5 823 aa10.1□□□□□ -0.79
STRADA-228ENST00000638578 KIF7Q2M1P5 1343 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 CDHR2Q9BYE9 1310 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 U2SURPO15042 1029 aaKnown RBP10.09□□□□□ -0.79
STRADA-228ENST00000638578 EPS15P42566 896 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 CST9Q5W186 159 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 SAPCD2Q86UD0 394 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 NIM1KQ8IY84 436 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 RPGRQ92834 1020 aaKnown RBP10.09□□□□□ -0.79
STRADA-228ENST00000638578 VPS33BQ9H267 617 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 ADARB2Q9NS39 739 aaKnown RBP10.09□□□□□ -0.79
STRADA-228ENST00000638578 LRRC37AA6NMS7 1700 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 ABCC12Q96J65 1359 aa10.09□□□□□ -0.79
STRADA-228ENST00000638578 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
STRADA-228ENST00000638578 DGKZQ13574 1117 aa10.08□□□□□ -0.8
STRADA-228ENST00000638578 TMX4Q9H1E5 349 aaPredicted RBP10.08□□□□□ -0.8
STRADA-228ENST00000638578 GPRC5DQ9NZD1 345 aa10.08□□□□□ -0.8
STRADA-228ENST00000638578 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
STRADA-228ENST00000638578 NPC1L1Q9UHC9 1359 aa10.08□□□□□ -0.8
STRADA-228ENST00000638578 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 TRAF5O00463 557 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
STRADA-228ENST00000638578 KCNQ3O43525 872 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 AOC2O75106 756 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 CELF2O95319 508 aaKnown RBP10.07□□□□□ -0.8
STRADA-228ENST00000638578 HOXA10P31260 410 aaPredicted RBP10.07□□□□□ -0.8
STRADA-228ENST00000638578 FMR1Q06787 632 aaKnown RBP eCLIP10.07□□□□□ -0.8
STRADA-228ENST00000638578 NOGQ13253 232 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 RTF1Q92541 710 aaKnown RBP10.07□□□□□ -0.8
STRADA-228ENST00000638578 PSME4Q14997 1843 aa10.07□□□□□ -0.8
STRADA-228ENST00000638578 ERVV-1B6SEH8 477 aa10.06□□□□□ -0.8
STRADA-228ENST00000638578 PPIP5K2O43314 1243 aa10.06□□□□□ -0.8
STRADA-228ENST00000638578 SUPT20HQ8NEM7 779 aa10.06□□□□□ -0.8
STRADA-228ENST00000638578 ZC3H15Q8WU90 426 aaKnown RBP10.06□□□□□ -0.8
STRADA-228ENST00000638578 RBM17Q96I25 401 aaKnown RBP10.06□□□□□ -0.8
STRADA-228ENST00000638578 CRAMP1Q96RY5 1269 aa10.06□□□□□ -0.8
STRADA-228ENST00000638578 TAF1P21675 1872 aa10.06□□□□□ -0.8
STRADA-228ENST00000638578 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
STRADA-228ENST00000638578 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
STRADA-228ENST00000638578 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
STRADA-228ENST00000638578 HLFQ16534 295 aa10.05□□□□□ -0.8
STRADA-228ENST00000638578 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms