RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 NLRP3Q96P20 1036 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 TAOK3Q9H2K8 898 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 IL16Q14005 1332 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
PPFIA1-225ENST00000638133 RIC3Q7Z5B4 369 aa19.21■□□□□ 0.67
PPFIA1-225ENST00000638133 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
PPFIA1-225ENST00000638133 STK31Q9BXU1 1019 aa19.21■□□□□ 0.67
PPFIA1-225ENST00000638133 TRMT112Q9UI30 125 aaKnown RBP19.21■□□□□ 0.67
PPFIA1-225ENST00000638133 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 NFKBIEO00221 500 aa19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 NLRP10Q86W26 655 aa19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 ZC3H4Q9UPT8 1303 aaKnown RBP19.2■□□□□ 0.66
PPFIA1-225ENST00000638133 RIC1Q4ADV7 1423 aa19.19■□□□□ 0.66
PPFIA1-225ENST00000638133 DDX58O95786 925 aaKnown RBP19.19■□□□□ 0.66
PPFIA1-225ENST00000638133 CRY2Q49AN0 593 aa19.19■□□□□ 0.66
PPFIA1-225ENST00000638133 TMX4Q9H1E5 349 aaPredicted RBP19.19■□□□□ 0.66
PPFIA1-225ENST00000638133 FER1L6Q2WGJ9 1857 aa19.19■□□□□ 0.66
PPFIA1-225ENST00000638133 TWISTNBQ3B726 338 aaPredicted RBP19.18■□□□□ 0.66
PPFIA1-225ENST00000638133 RTKN2Q8IZC4 609 aa19.18■□□□□ 0.66
PPFIA1-225ENST00000638133 SH3TC1Q8TE82 1336 aa19.18■□□□□ 0.66
PPFIA1-225ENST00000638133 ATP5J2-PTCD1G3V325 749 aa19.17■□□□□ 0.66
PPFIA1-225ENST00000638133 C16orf71Q8IYS4 520 aaPredicted RBP19.17■□□□□ 0.66
PPFIA1-225ENST00000638133 TSPYL6Q8N831 410 aa19.17■□□□□ 0.66
PPFIA1-225ENST00000638133 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
PPFIA1-225ENST00000638133 LTBP3Q9NS15 1303 aa19.17■□□□□ 0.66
PPFIA1-225ENST00000638133 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
PPFIA1-225ENST00000638133 SLC10A5Q5PT55 438 aa19.16■□□□□ 0.66
PPFIA1-225ENST00000638133 DPY19L2Q6NUT2 758 aa19.16■□□□□ 0.66
PPFIA1-225ENST00000638133 HOXA10P31260 410 aaPredicted RBP19.15■□□□□ 0.66
PPFIA1-225ENST00000638133 ZNF428Q96B54 188 aa19.15■□□□□ 0.66
PPFIA1-225ENST00000638133 CRAMP1Q96RY5 1269 aa19.15■□□□□ 0.66
PPFIA1-225ENST00000638133 NMRK2Q9NPI5 230 aa19.15■□□□□ 0.66
PPFIA1-225ENST00000638133 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
PPFIA1-225ENST00000638133 TCERG1O14776 1098 aaKnown RBP19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 HCLS1P14317 486 aaPredicted RBP19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 PRELPP51888 382 aa19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 FKBP4Q02790 459 aaKnown RBP eCLIP19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 CC2D2BQ6DHV5 1058 aa19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 C7orf43Q8WVR3 580 aa19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
PPFIA1-225ENST00000638133 KIF3CO14782 793 aa19.13■□□□□ 0.65
PPFIA1-225ENST00000638133 PPEF1O14829 653 aaPredicted RBP19.13■□□□□ 0.65
PPFIA1-225ENST00000638133 DDX46Q7L014 1031 aaKnown RBP19.13■□□□□ 0.65
PPFIA1-225ENST00000638133 MYD88Q99836 296 aa19.13■□□□□ 0.65
PPFIA1-225ENST00000638133 DICER1Q9UPY3 1922 aaKnown RBP19.13■□□□□ 0.65
PPFIA1-225ENST00000638133 GLTPD2A6NH11 291 aa19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 HSP90B1P14625 803 aaKnown RBP19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 GRIPAP1Q4V328 841 aa19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 FAM89AQ96GI7 184 aa19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 RRAGCQ9HB90 399 aa19.12■□□□□ 0.65
PPFIA1-225ENST00000638133 TOMM70O94826 608 aa19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 NEXNQ0ZGT2 675 aa19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 TRIM28Q13263 835 aaKnown RBP19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 RTL5Q5HYW3 569 aaPredicted RBP19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 MAP3K2Q9Y2U5 619 aa19.11■□□□□ 0.65
PPFIA1-225ENST00000638133 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
PPFIA1-225ENST00000638133 ZNF277Q9NRM2 450 aaPredicted RBP19.1■□□□□ 0.65
PPFIA1-225ENST00000638133 LAMB2P55268 1798 aa19.1■□□□□ 0.65
PPFIA1-225ENST00000638133 ABCC4O15439 1325 aa19.09■□□□□ 0.65
PPFIA1-225ENST00000638133 BBOX1O75936 387 aa19.09■□□□□ 0.65
PPFIA1-225ENST00000638133 KSR2Q6VAB6 950 aa19.09■□□□□ 0.65
PPFIA1-225ENST00000638133 CCDC191Q8NCU4 936 aa19.09■□□□□ 0.65
PPFIA1-225ENST00000638133 METTL22Q9BUU2 404 aaPredicted RBP19.09■□□□□ 0.65
PPFIA1-225ENST00000638133 CWC25Q9NXE8 425 aaPredicted RBP19.09■□□□□ 0.65
PPFIA1-225ENST00000638133 PI4KAP2A4QPH2 592 aa19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 IRS4O14654 1257 aaPredicted RBP19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 IARSP41252 1262 aaKnown RBP19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 PI4KAP1Q8N8J0 262 aa19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 ZBTB38Q8NAP3 1195 aaPredicted RBP19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 JDP2Q8WYK2 163 aa19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 PSMD1Q99460 953 aa19.08■□□□□ 0.64
PPFIA1-225ENST00000638133 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
PPFIA1-225ENST00000638133 VEGFAP15692 232 aaPredicted RBP19.07■□□□□ 0.64
PPFIA1-225ENST00000638133 ATP6V0A2Q9Y487 856 aa19.07■□□□□ 0.64
PPFIA1-225ENST00000638133 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
PPFIA1-225ENST00000638133 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
PPFIA1-225ENST00000638133 GRAPQ13588 217 aa19.06■□□□□ 0.64
PPFIA1-225ENST00000638133 GRAPLQ8TC17 118 aaPredicted RBP19.06■□□□□ 0.64
PPFIA1-225ENST00000638133 CACNA1FO60840 1977 aa19.05■□□□□ 0.64
PPFIA1-225ENST00000638133 VAMP4O75379 141 aa19.05■□□□□ 0.64
PPFIA1-225ENST00000638133 FLIIQ13045 1269 aa19.05■□□□□ 0.64
PPFIA1-225ENST00000638133 TMC4Q7Z404 712 aa19.05■□□□□ 0.64
PPFIA1-225ENST00000638133 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
PPFIA1-225ENST00000638133 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
PPFIA1-225ENST00000638133 PCCAP05165 728 aaPredicted RBP19.04■□□□□ 0.64
PPFIA1-225ENST00000638133 SF3B3Q15393 1217 aaKnown RBP19.04■□□□□ 0.64
PPFIA1-225ENST00000638133 G2E3Q7L622 706 aa19.04■□□□□ 0.64
PPFIA1-225ENST00000638133 SP8Q8IXZ3 490 aa19.04■□□□□ 0.64
PPFIA1-225ENST00000638133 LARGE2Q8N3Y3 721 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms