RNA–Protein interactions for RNA: ENST00000638075.1

EFHC1-238, Transcript of EF-hand domain containing 1, human

TSL 4

Gene EFHC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-238	ENST00000638075	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	POTEC	B2RU33	542 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	AIMP1	Q12904	312 aa	Known RBP	13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	TCIRG1	Q13488	830 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	DUSP27	Q5VZP5	1158 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	OLFM4	Q6UX06	510 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	RTKN2	Q8IZC4	609 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	UTP14A	Q9BVJ6	771 aa	Known RBP	13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	IFT57	Q9NWB7	429 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	CHPF2	Q9P2E5	772 aa		13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	DBF4	Q9UBU7	674 aa	Predicted RBP	13.23	□□□□□ -0.29
EFHC1-238	ENST00000638075	GNAI1	P63096	354 aa		13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	CALD1	Q05682	793 aa	Known RBP	13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	FSTL1	Q12841	308 aa		13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	HSP90AB3P	Q58FF7	597 aa		13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	HDGFL1	Q5TGJ6	251 aa		13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	CRAMP1	Q96RY5	1269 aa		13.22	□□□□□ -0.29
EFHC1-238	ENST00000638075	APLP1	P51693	650 aa		13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	ANKRD13D	Q6ZTN6	518 aa		13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	C3orf67	Q6ZVT6	689 aa		13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	NLRP10	Q86W26	655 aa		13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	PLBD2	Q8NHP8	589 aa		13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	RPGR	Q92834	1020 aa	Known RBP	13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	NLRP3	Q96P20	1036 aa		13.21	□□□□□ -0.29
EFHC1-238	ENST00000638075	SNED1	Q8TER0	1413 aa		13.21	□□□□□ -0.3
EFHC1-238	ENST00000638075	RNF123	Q5XPI4	1314 aa		13.2	□□□□□ -0.3
EFHC1-238	ENST00000638075	WDR90	Q96KV7	1748 aa		13.2	□□□□□ -0.3
EFHC1-238	ENST00000638075	CC2D2B	Q6DHV5	1058 aa		13.2	□□□□□ -0.3
EFHC1-238	ENST00000638075	RBM17	Q96I25	401 aa	Known RBP	13.2	□□□□□ -0.3
EFHC1-238	ENST00000638075	HYPK	Q9NX55	129 aa		13.2	□□□□□ -0.3
EFHC1-238	ENST00000638075	ANKRD36C	Q5JPF3	1778 aa		13.2	□□□□□ -0.3
EFHC1-238	ENST00000638075	DDN	O94850	711 aa	Predicted RBP	13.19	□□□□□ -0.3
EFHC1-238	ENST00000638075	GRIPAP1	Q4V328	841 aa		13.19	□□□□□ -0.3
EFHC1-238	ENST00000638075	SYNE4	Q8N205	404 aa		13.19	□□□□□ -0.3
EFHC1-238	ENST00000638075	DNAJC5G	Q8N7S2	189 aa		13.19	□□□□□ -0.3
EFHC1-238	ENST00000638075	PSMD1	Q99460	953 aa		13.19	□□□□□ -0.3
EFHC1-238	ENST00000638075	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.19	□□□□□ -0.3
EFHC1-238	ENST00000638075	ELL2	O00472	640 aa	Predicted RBP	13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	CCDC27	Q2M243	656 aa		13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	NCBP3	Q53F19	620 aa	Known RBP	13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	C8orf58	Q8NAV2	365 aa		13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	SMC1B	Q8NDV3	1235 aa		13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	ISCA1	Q9BUE6	129 aa		13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	TRMT112	Q9UI30	125 aa	Known RBP	13.18	□□□□□ -0.3
EFHC1-238	ENST00000638075	SH3TC1	Q8TE82	1336 aa		13.17	□□□□□ -0.3
EFHC1-238	ENST00000638075	FZD9	O00144	591 aa		13.17	□□□□□ -0.3
EFHC1-238	ENST00000638075	ANP32C	O43423	234 aa		13.17	□□□□□ -0.3
EFHC1-238	ENST00000638075	IARS	P41252	1262 aa	Known RBP	13.17	□□□□□ -0.3
EFHC1-238	ENST00000638075	TRIM28	Q13263	835 aa	Known RBP	13.17	□□□□□ -0.3
EFHC1-238	ENST00000638075	WWC1	Q8IX03	1113 aa		13.17	□□□□□ -0.3
EFHC1-238	ENST00000638075	PPEF1	O14829	653 aa	Predicted RBP	13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	BBOX1	O75936	387 aa		13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	HCLS1	P14317	486 aa	Predicted RBP	13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	PHAX	Q9H814	394 aa	Known RBP	13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	MRS2	Q9HD23	443 aa		13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	ATP6V0A2	Q9Y487	856 aa		13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	PCNT	O95613	3336 aa		13.16	□□□□□ -0.3
EFHC1-238	ENST00000638075	LAMB2	P55268	1798 aa		13.15	□□□□□ -0.3
EFHC1-238	ENST00000638075	ATP5J2-PTCD1	G3V325	749 aa		13.15	□□□□□ -0.3
EFHC1-238	ENST00000638075	SLC51A	Q86UW1	340 aa		13.15	□□□□□ -0.3
EFHC1-238	ENST00000638075	TSPYL6	Q8N831	410 aa		13.15	□□□□□ -0.3
EFHC1-238	ENST00000638075	CHMP4A	Q9BY43	222 aa		13.15	□□□□□ -0.3
EFHC1-238	ENST00000638075	ABCC4	O15439	1325 aa		13.14	□□□□□ -0.31
EFHC1-238	ENST00000638075	TCERG1	O14776	1098 aa	Known RBP	13.14	□□□□□ -0.31
EFHC1-238	ENST00000638075	CCDC30	Q5VVM6	783 aa		13.14	□□□□□ -0.31
EFHC1-238	ENST00000638075	SP8	Q8IXZ3	490 aa		13.14	□□□□□ -0.31
EFHC1-238	ENST00000638075	FAM89A	Q96GI7	184 aa		13.14	□□□□□ -0.31
EFHC1-238	ENST00000638075	ZNF541	Q9H0D2	1346 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	SCN4A	P35499	1836 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	IQCA1L	A6NCM1	817 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	SF3B3	Q15393	1217 aa	Known RBP	13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	RIC3	Q7Z5B4	369 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	JDP2	Q8WYK2	163 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	TSR2	Q969E8	191 aa	Known RBP	13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	ZNF428	Q96B54	188 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	VPS33B	Q9H267	617 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	IL16	Q14005	1332 aa		13.13	□□□□□ -0.31
EFHC1-238	ENST00000638075	TAF1	P21675	1872 aa		13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	COL4A5	P29400	1685 aa		13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	HTRA3	P83110	453 aa		13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	GOLGA2	Q08379	1002 aa		13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	GRAP	Q13588	217 aa		13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	DDX46	Q7L014	1031 aa	Known RBP	13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	GPC2	Q8N158	579 aa		13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	GRAPL	Q8TC17	118 aa	Predicted RBP	13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	TMX4	Q9H1E5	349 aa	Predicted RBP	13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	DDX60	Q8IY21	1712 aa	Known RBP	13.12	□□□□□ -0.31
EFHC1-238	ENST00000638075	POTEI	P0CG38	1075 aa		13.11	□□□□□ -0.31
EFHC1-238	ENST00000638075	POTEJ	P0CG39	1038 aa		13.11	□□□□□ -0.31
EFHC1-238	ENST00000638075	CHADL	Q6NUI6	762 aa		13.11	□□□□□ -0.31
EFHC1-238	ENST00000638075	LARGE2	Q8N3Y3	721 aa		13.11	□□□□□ -0.31
EFHC1-238	ENST00000638075	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.11	□□□□□ -0.31
EFHC1-238	ENST00000638075	IRS4	O14654	1257 aa	Predicted RBP	13.1	□□□□□ -0.31
EFHC1-238	ENST00000638075	TMC4	Q7Z404	712 aa		13.1	□□□□□ -0.31
EFHC1-238	ENST00000638075	WDR63	Q8IWG1	891 aa		13.1	□□□□□ -0.31

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