RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 PIP4K2AP48426 406 aaPredicted RBP9.07□□□□□ -0.96
MECP2-225ENST00000638041 EIF6P56537 245 aaKnown RBP9.07□□□□□ -0.96
MECP2-225ENST00000638041 ERFEQ4G0M1 354 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 CCDC152Q4G0S7 254 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 PRPF40BQ6NWY9 871 aaKnown RBP9.07□□□□□ -0.96
MECP2-225ENST00000638041 ZNF34Q8IZ26 560 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 CCDC191Q8NCU4 936 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 CRAMP1Q96RY5 1269 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 EYA3Q99504 573 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
MECP2-225ENST00000638041 RIC1Q4ADV7 1423 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 NRXN2Q9P2S2 1712 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 E9PSI1 815 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 TOMM70O94826 608 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 ZNF853P0CG23 659 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
MECP2-225ENST00000638041 KCNA3P22001 575 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 LMOD1P29536 600 aaPredicted RBP9.06□□□□□ -0.96
MECP2-225ENST00000638041 C1QTNF8P60827 252 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
MECP2-225ENST00000638041 HLFQ16534 295 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 TTLL7Q6ZT98 887 aa9.06□□□□□ -0.96
MECP2-225ENST00000638041 ZNF526Q8TF50 670 aaPredicted RBP9.06□□□□□ -0.96
MECP2-225ENST00000638041 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
MECP2-225ENST00000638041 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 KLRG2A4D1S0 409 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 ELL2O00472 640 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 PPEF1O14829 653 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 CT47B1P0C2W7 299 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
MECP2-225ENST00000638041 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 SLC10A5Q5PT55 438 aa9.05□□□□□ -0.96
MECP2-225ENST00000638041 CDC5LQ99459 802 aaKnown RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
MECP2-225ENST00000638041 GLTPD2A6NH11 291 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 SLC4A2P04920 1241 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 HOXA10P31260 410 aaPredicted RBP9.04□□□□□ -0.96
MECP2-225ENST00000638041 FSTL1Q12841 308 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 KSR2Q6VAB6 950 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 POTEDQ86YR6 584 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 NIM1KQ8IY84 436 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 ZBTB38Q8NAP3 1195 aaPredicted RBP9.04□□□□□ -0.96
MECP2-225ENST00000638041 PSMD1Q99460 953 aa9.04□□□□□ -0.96
MECP2-225ENST00000638041 NUP98P52948 1817 aa9.03□□□□□ -0.96
MECP2-225ENST00000638041 PDE8AO60658 829 aa9.03□□□□□ -0.96
MECP2-225ENST00000638041 CRY2Q49AN0 593 aa9.03□□□□□ -0.96
MECP2-225ENST00000638041 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
MECP2-225ENST00000638041 PNMA8AQ86V59 439 aaPredicted RBP9.03□□□□□ -0.96
MECP2-225ENST00000638041 LARGE2Q8N3Y3 721 aa9.03□□□□□ -0.96
MECP2-225ENST00000638041 SMC1BQ8NDV3 1235 aa9.03□□□□□ -0.96
MECP2-225ENST00000638041 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
MECP2-225ENST00000638041 DLEC1Q9Y238 1755 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 IRS4O14654 1257 aaPredicted RBP9.02□□□□□ -0.97
MECP2-225ENST00000638041 NTSR2O95665 410 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 IGHMBP2P38935 993 aaKnown RBP9.02□□□□□ -0.97
MECP2-225ENST00000638041 IARSP41252 1262 aaKnown RBP9.02□□□□□ -0.97
MECP2-225ENST00000638041 APLP1P51693 650 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 GRAPQ13588 217 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 TNIP1Q15025 636 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 PDIA6Q15084 440 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 DIEXFQ68CQ4 756 aaKnown RBP9.02□□□□□ -0.97
MECP2-225ENST00000638041 SP8Q8IXZ3 490 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 MPNDQ8N594 471 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
MECP2-225ENST00000638041 GRAPLQ8TC17 118 aaPredicted RBP9.02□□□□□ -0.97
MECP2-225ENST00000638041 MYD88Q99836 296 aa9.02□□□□□ -0.97
MECP2-225ENST00000638041 ANXA1P04083 346 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 PCCAP05165 728 aaPredicted RBP9.01□□□□□ -0.97
MECP2-225ENST00000638041 TAF7LQ5H9L4 462 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 ANKRD18AQ8IVF6 992 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 CCDC24Q8N4L8 307 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 TSR2Q969E8 191 aaKnown RBP9.01□□□□□ -0.97
MECP2-225ENST00000638041 MPHOSPH8Q99549 860 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
MECP2-225ENST00000638041 ANKIB1Q9P2G1 1089 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 MAP3K2Q9Y2U5 619 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 ATP6V0A2Q9Y487 856 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 FANCIQ9NVI1 1328 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 CACNA1FO60840 1977 aa9.01□□□□□ -0.97
MECP2-225ENST00000638041 ADCY9O60503 1353 aa9□□□□□ -0.97
MECP2-225ENST00000638041 BRCA1P38398 1863 aaKnown RBP9□□□□□ -0.97
MECP2-225ENST00000638041 PI4KAP2A4QPH2 592 aa9□□□□□ -0.97
MECP2-225ENST00000638041 IPO8O15397 1037 aaKnown RBP9□□□□□ -0.97
MECP2-225ENST00000638041 PPIP5K2O43314 1243 aa9□□□□□ -0.97
MECP2-225ENST00000638041 FLIIQ13045 1269 aa9□□□□□ -0.97
MECP2-225ENST00000638041 SF3B3Q15393 1217 aaKnown RBP9□□□□□ -0.97
MECP2-225ENST00000638041 GPC2Q8N158 579 aa9□□□□□ -0.97
MECP2-225ENST00000638041 PI4KAP1Q8N8J0 262 aa9□□□□□ -0.97
MECP2-225ENST00000638041 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
MECP2-225ENST00000638041 LINS1Q8NG48 757 aa9□□□□□ -0.97
MECP2-225ENST00000638041 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
MECP2-225ENST00000638041 ISCA1Q9BUE6 129 aa9□□□□□ -0.97
MECP2-225ENST00000638041 ZC3H12CQ9C0D7 883 aaKnown RBP9□□□□□ -0.97
MECP2-225ENST00000638041 PTPRCP08575 1304 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms