RNA–Protein interactions for RNA: ENST00000637649.1

CHRNA7-230, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-230ENST00000637649 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
CHRNA7-230ENST00000637649 NUTM1Q86Y26 1132 aa17.43■□□□□ 0.38
CHRNA7-230ENST00000637649 LARGE2Q8N3Y3 721 aa17.43■□□□□ 0.38
CHRNA7-230ENST00000637649 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
CHRNA7-230ENST00000637649 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
CHRNA7-230ENST00000637649 PSMD1Q99460 953 aa17.43■□□□□ 0.38
CHRNA7-230ENST00000637649 RGS19P49795 217 aa17.42■□□□□ 0.38
CHRNA7-230ENST00000637649 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
CHRNA7-230ENST00000637649 THSD7BQ9C0I4 1608 aa17.42■□□□□ 0.38
CHRNA7-230ENST00000637649 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
CHRNA7-230ENST00000637649 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
CHRNA7-230ENST00000637649 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
CHRNA7-230ENST00000637649 MCOLN1Q9GZU1 580 aa17.41■□□□□ 0.38
CHRNA7-230ENST00000637649 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
CHRNA7-230ENST00000637649 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
CHRNA7-230ENST00000637649 MCM10Q7L590 875 aa17.4■□□□□ 0.38
CHRNA7-230ENST00000637649 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
CHRNA7-230ENST00000637649 RPGRQ92834 1020 aaKnown RBP17.39■□□□□ 0.37
CHRNA7-230ENST00000637649 KIF7Q2M1P5 1343 aa17.39■□□□□ 0.37
CHRNA7-230ENST00000637649 CELF2O95319 508 aaKnown RBP17.38■□□□□ 0.37
CHRNA7-230ENST00000637649 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
CHRNA7-230ENST00000637649 USP50Q70EL3 339 aaPredicted RBP17.38■□□□□ 0.37
CHRNA7-230ENST00000637649 NIM1KQ8IY84 436 aa17.38■□□□□ 0.37
CHRNA7-230ENST00000637649 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
CHRNA7-230ENST00000637649 MAP2K2P36507 400 aa17.37■□□□□ 0.37
CHRNA7-230ENST00000637649 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
CHRNA7-230ENST00000637649 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
CHRNA7-230ENST00000637649 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
CHRNA7-230ENST00000637649 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
CHRNA7-230ENST00000637649 NUP98P52948 1817 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 GPTP24298 496 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 DGKZQ13574 1117 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 PCDH10Q9P2E7 1040 aa17.36■□□□□ 0.37
CHRNA7-230ENST00000637649 PPEF1O14829 653 aaPredicted RBP17.35■□□□□ 0.37
CHRNA7-230ENST00000637649 AOC3Q16853 763 aa17.35■□□□□ 0.37
CHRNA7-230ENST00000637649 ADARB2Q9NS39 739 aaKnown RBP17.35■□□□□ 0.37
CHRNA7-230ENST00000637649 RGL2O15211 777 aa17.34■□□□□ 0.37
CHRNA7-230ENST00000637649 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
CHRNA7-230ENST00000637649 RBM17Q96I25 401 aaKnown RBP17.34■□□□□ 0.37
CHRNA7-230ENST00000637649 GPRC5DQ9NZD1 345 aa17.34■□□□□ 0.37
CHRNA7-230ENST00000637649 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
CHRNA7-230ENST00000637649 CA12O43570 354 aa17.33■□□□□ 0.36
CHRNA7-230ENST00000637649 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
CHRNA7-230ENST00000637649 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
CHRNA7-230ENST00000637649 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
CHRNA7-230ENST00000637649 GMPSP49915 693 aaPredicted RBP17.32■□□□□ 0.36
CHRNA7-230ENST00000637649 CXCL9Q07325 125 aa17.32■□□□□ 0.36
CHRNA7-230ENST00000637649 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
CHRNA7-230ENST00000637649 ZIC5Q96T25 663 aa17.32■□□□□ 0.36
CHRNA7-230ENST00000637649 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
CHRNA7-230ENST00000637649 NPC1L1Q9UHC9 1359 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 UBN2Q6ZU65 1347 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 SUSD4Q5VX71 490 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
CHRNA7-230ENST00000637649 MYL6BP14649 208 aa17.3■□□□□ 0.36
CHRNA7-230ENST00000637649 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-230ENST00000637649 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 RAD17O75943 681 aa17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 DLK2Q6UY11 383 aa17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 ZNRF3Q9ULT6 936 aa17.29■□□□□ 0.36
CHRNA7-230ENST00000637649 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 SOX10P56693 466 aa17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 TRPM4Q8TD43 1214 aa17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-230ENST00000637649 HHIPL1Q96JK4 782 aa17.27■□□□□ 0.36
CHRNA7-230ENST00000637649 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.36
CHRNA7-230ENST00000637649 NTSR2O95665 410 aa17.26■□□□□ 0.35
CHRNA7-230ENST00000637649 HUNKP57058 714 aa17.26■□□□□ 0.35
CHRNA7-230ENST00000637649 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
CHRNA7-230ENST00000637649 NOGQ13253 232 aa17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 CDC37L1Q7L3B6 337 aa17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 PGAP2Q9UHJ9 254 aa17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-230ENST00000637649 ABCC4O15439 1325 aa17.24■□□□□ 0.35
CHRNA7-230ENST00000637649 SUPT20HQ8NEM7 779 aa17.24■□□□□ 0.35
CHRNA7-230ENST00000637649 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-230ENST00000637649 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
CHRNA7-230ENST00000637649 TNIP1Q15025 636 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms