RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TTC41PQ6P2S7 1318 aa23.96■■□□□ 1.43
CACNA1A-243ENST00000637616 SPATA31D1Q6ZQQ2 1576 aa23.96■■□□□ 1.43
CACNA1A-243ENST00000637616 TECPR2O15040 1411 aa23.96■■□□□ 1.43
CACNA1A-243ENST00000637616 A0A087WWV3 80 aa23.96■■□□□ 1.43
CACNA1A-243ENST00000637616 HOXC9P31274 260 aa23.96■■□□□ 1.43
CACNA1A-243ENST00000637616 SLC27A2O14975 620 aa23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 ARID5BQ14865 1188 aa23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 CWF19L2Q2TBE0 894 aaKnown RBP23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 CCDC144BQ3MJ40 725 aa23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 C14orf37Q86TY3 774 aa23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 CCDC144CPQ8IYA2 1237 aa23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 BICD2Q8TD16 824 aa23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 C9orf78Q9NZ63 289 aaPredicted RBP23.95■■□□□ 1.43
CACNA1A-243ENST00000637616 ZNF75DP51815 510 aa23.95■■□□□ 1.42
CACNA1A-243ENST00000637616 TM6SF1Q9BZW5 370 aa23.95■■□□□ 1.42
CACNA1A-243ENST00000637616 CACTINQ8WUQ7 758 aaKnown RBP23.95■■□□□ 1.42
CACNA1A-243ENST00000637616 BOLA2Q9H3K6 86 aa23.95■■□□□ 1.42
CACNA1A-243ENST00000637616 TLR7Q9NYK1 1049 aaKnown RBP23.95■■□□□ 1.42
CACNA1A-243ENST00000637616 A0A0D9SFI3 127 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 HDGFP51858 240 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 FOSBP53539 338 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 HSP90AB4PQ58FF6 505 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 JAK2O60674 1132 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 LTKP29376 864 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 ZNF165P49910 485 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 LEO1Q8WVC0 666 aaPredicted RBP23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 SIL1Q9H173 461 aa23.94■■□□□ 1.42
CACNA1A-243ENST00000637616 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
CACNA1A-243ENST00000637616 PGBD1Q96JS3 809 aa23.93■■□□□ 1.42
CACNA1A-243ENST00000637616 GTPBP4Q9BZE4 634 aaKnown RBP23.93■■□□□ 1.42
CACNA1A-243ENST00000637616 EIF4A1P60842 406 aaKnown RBP23.93■■□□□ 1.42
CACNA1A-243ENST00000637616 TPD52L1Q16890 204 aaPredicted RBP23.93■■□□□ 1.42
CACNA1A-243ENST00000637616 CLIP2Q9UDT6 1046 aa23.93■■□□□ 1.42
CACNA1A-243ENST00000637616 BLOC1S2Q6QNY1 142 aa23.92■■□□□ 1.42
CACNA1A-243ENST00000637616 EVI5LQ96CN4 794 aa23.92■■□□□ 1.42
CACNA1A-243ENST00000637616 EDC3Q96F86 508 aaKnown RBP23.92■■□□□ 1.42
CACNA1A-243ENST00000637616 MAP4K1Q92918 833 aa23.92■■□□□ 1.42
CACNA1A-243ENST00000637616 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.92■■□□□ 1.42
CACNA1A-243ENST00000637616 V9GYY5 206 aaPredicted RBP23.92■■□□□ 1.42
CACNA1A-243ENST00000637616 A0A0U1RQG5 324 aaPredicted RBP23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 PPFIA3O75145 1194 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 KLHDC4Q8TBB5 520 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 EAF2Q96CJ1 260 aaPredicted RBP23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 MAP3K2Q9Y2U5 619 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 TOB2Q14106 344 aaPredicted RBP23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 PLA2G4DQ86XP0 818 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 TTC21AQ8NDW8 1320 aa23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 USP42Q9H9J4 1324 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-243ENST00000637616 TSPOAP1O95153 1857 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 KCNB2Q92953 911 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 USP27XA6NNY8 438 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 FBXW7Q969H0 707 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 PXDNLA1KZ92 1463 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 ADCY9O60503 1353 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 CHGBP05060 677 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 ZNF589Q86UQ0 364 aaPredicted RBP23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 GPATCH3Q96I76 525 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 FSD1Q9BTV5 496 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 CLSTN2Q9H4D0 955 aa23.9■■□□□ 1.42
CACNA1A-243ENST00000637616 SCAND2PQ9GZW5 306 aaPredicted RBP23.89■■□□□ 1.42
CACNA1A-243ENST00000637616 NDUFB9Q9Y6M9 179 aa23.89■■□□□ 1.42
CACNA1A-243ENST00000637616 ELP1O95163 1332 aa23.89■■□□□ 1.41
CACNA1A-243ENST00000637616 PRAMEF22A3QJZ6 481 aa23.89■■□□□ 1.41
CACNA1A-243ENST00000637616 SASH1O94885 1247 aa23.88■■□□□ 1.41
CACNA1A-243ENST00000637616 PDCP20941 246 aa23.88■■□□□ 1.41
CACNA1A-243ENST00000637616 CCDC112Q8NEF3 446 aa23.88■■□□□ 1.41
CACNA1A-243ENST00000637616 SMTNL1A8MU46 457 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 PSMA5P28066 241 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 FTOQ9C0B1 505 aaKnown RBP eCLIP23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 NPHP3Q7Z494 1330 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 RPS6KB1P23443 525 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 ERCC4Q92889 916 aaPredicted RBP23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 LRRC2Q9BYS8 371 aa23.87■■□□□ 1.41
CACNA1A-243ENST00000637616 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 DDX19AQ9NUU7 478 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 CTNNA3Q9UI47 895 aa23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 ADAMTS13Q76LX8 1427 aa23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 AIMP1Q12904 312 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 C11orf57Q6ZUT1 292 aaPredicted RBP23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 TDRD7Q8NHU6 1098 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 TRMT1Q9NXH9 659 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-243ENST00000637616 BRF1Q92994 677 aa23.85■■□□□ 1.41
CACNA1A-243ENST00000637616 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
CACNA1A-243ENST00000637616 BTBD11A6QL63 1104 aa23.85■■□□□ 1.41
CACNA1A-243ENST00000637616 ZNF771Q7L3S4 317 aaPredicted RBP23.85■■□□□ 1.41
CACNA1A-243ENST00000637616 FILIP1Q7Z7B0 1213 aa23.85■■□□□ 1.41
CACNA1A-243ENST00000637616 USP16Q9Y5T5 823 aa23.84■■□□□ 1.41
CACNA1A-243ENST00000637616 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
CACNA1A-243ENST00000637616 CEP135Q66GS9 1140 aa23.84■■□□□ 1.41
CACNA1A-243ENST00000637616 SUCLG2Q96I99 432 aa23.84■■□□□ 1.41
CACNA1A-243ENST00000637616 NPHP1O15259 732 aa23.83■■□□□ 1.41
CACNA1A-243ENST00000637616 OGFRQ9NZT2 677 aa23.83■■□□□ 1.41
CACNA1A-243ENST00000637616 DIP2BQ9P265 1576 aa23.83■■□□□ 1.41
CACNA1A-243ENST00000637616 HSP90B1P14625 803 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 974.9 ms