RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 PCK1P35558 622 aa11.15□□□□□ -0.62
CACNA1A-242ENST00000637485 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
CACNA1A-242ENST00000637485 WDR62O43379 1518 aa11.15□□□□□ -0.63
CACNA1A-242ENST00000637485 RFC1P35251 1148 aaPredicted RBP11.15□□□□□ -0.63
CACNA1A-242ENST00000637485 ATP11AP98196 1134 aa11.15□□□□□ -0.63
CACNA1A-242ENST00000637485 KRT32Q14532 448 aa11.15□□□□□ -0.63
CACNA1A-242ENST00000637485 IFT74Q96LB3 600 aa11.15□□□□□ -0.63
CACNA1A-242ENST00000637485 SHANK2Q9UPX8 1470 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 ANKRD36BQ8N2N9 1353 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 BTBD11A6QL63 1104 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 SSFA2P28290 1259 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 STK3Q13188 491 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 WASLO00401 505 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 ARHGAP25P42331 645 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC129Q6ZRS4 1044 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 BUB1BO60566 1050 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 POTEJP0CG39 1038 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 TSNAXIP1Q2TAA8 658 aa11.14□□□□□ -0.63
CACNA1A-242ENST00000637485 MXRA7P84157 204 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 HDXQ7Z353 690 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 SPATS2LQ9NUQ6 558 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 FERP16591 822 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 IDI1Q13907 227 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 PAF1Q8N7H5 531 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 WASF1Q92558 559 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 SAMD15Q9P1V8 674 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 IL16Q14005 1332 aa11.13□□□□□ -0.63
CACNA1A-242ENST00000637485 SKILP12757 684 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 CACNA2D4Q7Z3S7 1137 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 ANAPC4Q9UJX5 808 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 GBP1P32455 592 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 ZNF165P49910 485 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 SETDB1Q15047 1291 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 LARP1Q6PKG0 1096 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 ZNF365Q70YC5 407 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 ZSWIM4Q9H7M6 989 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 JADE2Q9NQC1 790 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 SYCP2Q9BX26 1530 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 PRAG1Q86YV5 1406 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 ZSCAN25Q6NSZ9 544 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 TOM1L2Q6ZVM7 507 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 RPUSD2Q8IZ73 545 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC110Q8TBZ0 833 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 TMX1Q9H3N1 280 aa11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 SH2B1Q9NRF2 756 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-242ENST00000637485 SRGAP3O43295 1099 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 ANAPC15P60006 121 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 DUSP27Q5VZP5 1158 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 CEP128Q6ZU80 1094 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 VCX3BQ9H321 246 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 FAM114A2Q9NRY5 505 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 GNL3LQ9NVN8 582 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 SLC3A2P08195 630 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 STMN2Q93045 179 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 ERO1AQ96HE7 468 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 TRIM7Q9C029 511 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 USH1CQ9Y6N9 552 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 CASQ2O14958 399 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 DBN1Q16643 649 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 KDM4AO75164 1064 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 CNNM1Q9NRU3 951 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 ARHGEF12Q9NZN5 1544 aa11.11□□□□□ -0.63
CACNA1A-242ENST00000637485 UBE2HP62256 183 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC38Q502W7 563 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 JAKMIP1Q96N16 626 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 CWC25Q9NXE8 425 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 GBP7Q8N8V2 638 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 IFI16Q16666 785 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 ZMAT2Q96NC0 199 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 MAP7Q14244 749 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 NME9Q86XW9 330 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 CKAP2LQ8IYA6 745 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms