RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 PDCL2Q8N4E4 241 aa23.35■■□□□ 1.33
CACNA1A-241ENST00000637475 PDRG1Q9NUG6 133 aa23.35■■□□□ 1.33
CACNA1A-241ENST00000637475 RIOK3O14730 519 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-241ENST00000637475 ST3GAL1Q11201 340 aa23.34■■□□□ 1.33
CACNA1A-241ENST00000637475 CYP46A1Q9Y6A2 500 aa23.34■■□□□ 1.33
CACNA1A-241ENST00000637475 PDCP20941 246 aa23.34■■□□□ 1.33
CACNA1A-241ENST00000637475 MAP3K11Q16584 847 aa23.34■■□□□ 1.33
CACNA1A-241ENST00000637475 PPP4R3BQ5MIZ7 849 aa23.34■■□□□ 1.33
CACNA1A-241ENST00000637475 KRT85P78386 507 aa23.33■■□□□ 1.33
CACNA1A-241ENST00000637475 NECTIN1Q15223 517 aa23.33■■□□□ 1.33
CACNA1A-241ENST00000637475 MRVI1Q9Y6F6 885 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 CEMIPQ8WUJ3 1361 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 AFF2P51816 1311 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 CAVIN2O95810 425 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 CCDC83Q8IWF9 413 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 TSC1Q92574 1164 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 NUP62CLQ9H1M0 184 aa23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 DDX19AQ9NUU7 478 aaKnown RBP23.32■■□□□ 1.32
CACNA1A-241ENST00000637475 ATP2B3Q16720 1220 aa23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 TDRD7Q8NHU6 1098 aaKnown RBP23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 JARID2Q92833 1246 aaPredicted RBP23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 C8orf37Q96NL8 207 aa23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 SRGAP3O43295 1099 aa23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 TYRO3Q06418 890 aa23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 TTC6Q86TZ1 520 aa23.31■■□□□ 1.32
CACNA1A-241ENST00000637475 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 CDC25BP30305 580 aa23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 BEND3Q5T5X7 828 aa23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 CWC27Q6UX04 472 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 PLA2G4DQ86XP0 818 aa23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 MPNDQ8N594 471 aa23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 SCAND2PQ9GZW5 306 aaPredicted RBP23.3■■□□□ 1.32
CACNA1A-241ENST00000637475 SMTNL1A8MU46 457 aa23.29■■□□□ 1.32
CACNA1A-241ENST00000637475 HIP1O00291 1037 aa23.29■■□□□ 1.32
CACNA1A-241ENST00000637475 HDGFL1Q5TGJ6 251 aa23.29■■□□□ 1.32
CACNA1A-241ENST00000637475 JAKMIP1Q96N16 626 aaKnown RBP23.29■■□□□ 1.32
CACNA1A-241ENST00000637475 PXDNQ92626 1479 aa23.29■■□□□ 1.32
CACNA1A-241ENST00000637475 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
CACNA1A-241ENST00000637475 ANKRD1Q15327 319 aa23.28■■□□□ 1.32
CACNA1A-241ENST00000637475 ME3Q16798 604 aa23.28■■□□□ 1.32
CACNA1A-241ENST00000637475 ERC1Q8IUD2 1116 aa23.28■■□□□ 1.32
CACNA1A-241ENST00000637475 EVI5LQ96CN4 794 aa23.28■■□□□ 1.32
CACNA1A-241ENST00000637475 ECHDC1Q9NTX5 307 aa23.28■■□□□ 1.32
CACNA1A-241ENST00000637475 MAP4K4O95819 1239 aaPredicted RBP23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 PTH1RQ03431 593 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 GPATCH3Q96I76 525 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 ZKSCAN1P17029 563 aaPredicted RBP23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 PSMA5P28066 241 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 ADCK5Q3MIX3 580 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 MAP4K1Q92918 833 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 PRDM10Q9NQV6 1147 aa23.27■■□□□ 1.32
CACNA1A-241ENST00000637475 AMPHP49418 695 aa23.26■■□□□ 1.31
CACNA1A-241ENST00000637475 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
CACNA1A-241ENST00000637475 CLSTN2Q9H4D0 955 aa23.26■■□□□ 1.31
CACNA1A-241ENST00000637475 PAXBP1Q9Y5B6 917 aa23.26■■□□□ 1.31
CACNA1A-241ENST00000637475 ZNF75DP51815 510 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 CLASRPQ8N2M8 674 aaKnown RBP23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 HDAC5Q9UQL6 1122 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 RGPD8O14715 1765 aaPredicted RBP23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 LMO7Q8WWI1 1683 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 PTGS1P23219 599 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 CBX1P83916 185 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 TSGA10IPQ3SY00 556 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 OGFRQ9NZT2 677 aa23.25■■□□□ 1.31
CACNA1A-241ENST00000637475 ANKARQ7Z5J8 1434 aa23.24■■□□□ 1.31
CACNA1A-241ENST00000637475 NCBP1Q09161 790 aaKnown RBP23.24■■□□□ 1.31
CACNA1A-241ENST00000637475 LARP1BQ659C4 914 aaKnown RBP23.24■■□□□ 1.31
CACNA1A-241ENST00000637475 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
CACNA1A-241ENST00000637475 PHAXQ9H814 394 aaKnown RBP23.24■■□□□ 1.31
CACNA1A-241ENST00000637475 CBX8Q9HC52 389 aa23.24■■□□□ 1.31
CACNA1A-241ENST00000637475 COL22A1Q8NFW1 1626 aaPredicted RBP23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 VPS37CA5D8V6 355 aaPredicted RBP23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 NBPF7P0C2Y1 421 aaPredicted RBP23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 CPA1P15085 419 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 LIG1P18858 919 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 RXRBP28702 533 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 CREB3L3Q68CJ9 461 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 MRC1P22897 1456 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 ALDH1L1O75891 902 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 SARM1Q6SZW1 724 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 NGLY1Q96IV0 654 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 ARID3AQ99856 593 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 TNMDQ9H2S6 317 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 TPCN1Q9ULQ1 816 aa23.23■■□□□ 1.31
CACNA1A-241ENST00000637475 HOXC9P31274 260 aa23.22■■□□□ 1.31
CACNA1A-241ENST00000637475 SPC24Q8NBT2 197 aa23.22■■□□□ 1.31
CACNA1A-241ENST00000637475 RBM8AQ9Y5S9 174 aaKnown RBP23.22■■□□□ 1.31
CACNA1A-241ENST00000637475 NEMFO60524 1076 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 ZSCAN25Q6NSZ9 544 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 CDC37L1Q7L3B6 337 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 ADCY9O60503 1353 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 KIF1AQ12756 1690 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 PLCB2Q00722 1185 aa23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 LARP6Q9BRS8 491 aaKnown RBP23.21■■□□□ 1.31
CACNA1A-241ENST00000637475 CGNQ9P2M7 1197 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms