RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	ATRIP	Q8WXE1	791 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	AMOTL2	Q9Y2J4	779 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	NDC80	O14777	642 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	PPP1R12A	O14974	1030 aa	Predicted RBP	3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	VIM	P08670	466 aa	Known RBP	3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	ERCC3	P19447	782 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	HOXD10	P28358	340 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	HNRNPU	Q00839	825 aa	Known RBP eCLIP	3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	RALBP1	Q15311	655 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	LRRC45	Q96CN5	670 aa		3.22	□□□□□ -1.89
CACNB4-238	ENST00000636901	SENP3-EIF4A1	A0A087X0R7	540 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TCERG1	O14776	1098 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TRAK2	O60296	914 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	RFC4	P35249	363 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	C16orf72	Q14CZ0	275 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	HOOK3	Q86VS8	718 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	POTED	Q86YR6	584 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	NLGN1	Q8N2Q7	840 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	WDR48	Q8TAF3	677 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ERMN	Q8TAM6	284 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	GSDMB	Q8TAX9	411 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	NYX	Q9GZU5	481 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	PHF3	Q92576	2039 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	PALM3	A6NDB9	673 aa	Predicted RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	IFIT2	P09913	472 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	DSG3	P32926	999 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SNX16	P57768	344 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	FKBP15	Q5T1M5	1219 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CCT6B	Q92526	530 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	FERMT2	Q96AC1	680 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	C16orf45	Q96MC5	204 aa	Predicted RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TMEM106C	Q9BVX2	250 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	RBM28	Q9NW13	759 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	HOOK1	Q9UJC3	728 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SERPINA10	Q9UK55	444 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CEP83	Q9Y592	693 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ARAP1	Q96P48	1450 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	WIZ	O95785	1651 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	HMGB1P1	B2RPK0	211 aa	Predicted RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	STXBP3	O00186	592 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TNNI2	P48788	182 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TAX1BP1	Q86VP1	789 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CUL5	Q93034	780 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SYAP1	Q96A49	352 aa	Predicted RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	NACA2	Q9H009	215 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SYNDIG1	Q9H7V2	258 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	NKTR	P30414	1462 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	KDM5D	Q9BY66	1539 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CA12	O43570	354 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ZNF165	P49910	485 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CCDC150	Q8NCX0	1101 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TMOD3	Q9NYL9	352 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	MRVI1	Q9Y6F6	885 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	FAM208B	Q5VWN6	2430 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CEP170	Q5SW79	1584 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SCN2A	Q99250	2005 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	BIVM-ERCC5	R4GMW8	1640 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ZNF462	Q96JM2	2506 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ERLIN2	O94905	339 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ZNF76	P36508	570 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	EIF5	P55010	431 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	B4GALNT3	Q6L9W6	998 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SLC4A10	Q6U841	1118 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ZNF408	Q9H9D4	720 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TTC21A	Q8NDW8	1320 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	GOLGA6B	A6NDN3	693 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SPECC1L-ADORA2A	F8WAN1	911 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	PABPC4	Q13310	644 aa	Known RBP eCLIP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	INF2	Q27J81	1249 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CFAP58	Q5T655	872 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	C1orf228	Q6PIY5	440 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	TMC4	Q7Z404	712 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CCDC91	Q7Z6B0	441 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	OGFOD1	Q8N543	542 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	SCG3	Q8WXD2	468 aa	Known RBP	3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	ALS2CR12	Q96Q35	445 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	CCDC61	Q9Y6R9	512 aa		3.21	□□□□□ -1.9
CACNB4-238	ENST00000636901	EIF3CL	B5ME19	914 aa	Known RBP	3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	OCM2	P0CE71	109 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	OCM	P0CE72	109 aa	Predicted RBP	3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	POTEJ	P0CG39	1038 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	BRDT	Q58F21	947 aa	Predicted RBP	3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	INCENP	Q9NQS7	918 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	NINL	Q9Y2I6	1382 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	ANKRD18B	A2A2Z9	1011 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	WHAMM	Q8TF30	809 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	RPGR	Q92834	1020 aa	Known RBP	3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	CNKSR1	Q969H4	720 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	NR2E3	Q9Y5X4	410 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	RIMS2	Q9UQ26	1411 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	EHBP1L1	Q8N3D4	1523 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	SMARCA5	O60264	1052 aa	Predicted RBP	3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	PDE6A	P16499	860 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	ARID4A	P29374	1257 aa	Predicted RBP	3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	CSPP1	Q1MSJ5	1256 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	ANKRD13D	Q6ZTN6	518 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	FAM167B	Q9BTA0	163 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	NCKAP5L	Q9HCH0	1330 aa		3.2	□□□□□ -1.9
CACNB4-238	ENST00000636901	TCOF1	Q13428	1488 aa	Known RBP	3.2	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms