RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 RPGRQ92834 1020 aaKnown RBP10.46□□□□□ -0.73
PNKP-226ENST00000636840 ISCA1Q9BUE6 129 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 CWC25Q9NXE8 425 aaPredicted RBP10.46□□□□□ -0.73
PNKP-226ENST00000636840 SH3TC1Q8TE82 1336 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 NUP98P52948 1817 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 IBTKQ9P2D0 1353 aaPredicted RBP10.45□□□□□ -0.74
PNKP-226ENST00000636840 ZBED9Q6R2W3 1325 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 UBN2Q6ZU65 1347 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 NTSR2O95665 410 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 SRGNP10124 158 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 KCNA3P22001 575 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 ARHGAP27Q6ZUM4 889 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 G2E3Q7L622 706 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 RBM17Q96I25 401 aaKnown RBP10.45□□□□□ -0.74
PNKP-226ENST00000636840 SMC4Q9NTJ3 1288 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 WWC3Q9ULE0 1092 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 CACNA1FO60840 1977 aa10.45□□□□□ -0.74
PNKP-226ENST00000636840 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
PNKP-226ENST00000636840 SOGA3Q5TF21 947 aa10.44□□□□□ -0.74
PNKP-226ENST00000636840 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
PNKP-226ENST00000636840 ZBTB38Q8NAP3 1195 aaPredicted RBP10.44□□□□□ -0.74
PNKP-226ENST00000636840 LINS1Q8NG48 757 aa10.44□□□□□ -0.74
PNKP-226ENST00000636840 FAM89AQ96GI7 184 aa10.44□□□□□ -0.74
PNKP-226ENST00000636840 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
PNKP-226ENST00000636840 PTPRCP08575 1304 aa10.43□□□□□ -0.74
PNKP-226ENST00000636840 IPO8O15397 1037 aaKnown RBP10.43□□□□□ -0.74
PNKP-226ENST00000636840 PCCAP05165 728 aaPredicted RBP10.43□□□□□ -0.74
PNKP-226ENST00000636840 SLC4A10Q6U841 1118 aa10.43□□□□□ -0.74
PNKP-226ENST00000636840 DDX46Q7L014 1031 aaKnown RBP10.43□□□□□ -0.74
PNKP-226ENST00000636840 SSH1Q8WYL5 1049 aa10.43□□□□□ -0.74
PNKP-226ENST00000636840 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
PNKP-226ENST00000636840 AFDNP55196 1824 aaKnown RBP10.42□□□□□ -0.74
PNKP-226ENST00000636840 BCORQ6W2J9 1755 aa10.42□□□□□ -0.74
PNKP-226ENST00000636840 IRS4O14654 1257 aaPredicted RBP10.42□□□□□ -0.74
PNKP-226ENST00000636840 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
PNKP-226ENST00000636840 YBX3P16989 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
PNKP-226ENST00000636840 RTL5Q5HYW3 569 aaPredicted RBP10.42□□□□□ -0.74
PNKP-226ENST00000636840 CC2D2BQ6DHV5 1058 aa10.42□□□□□ -0.74
PNKP-226ENST00000636840 SRCIN1Q9C0H9 1055 aa10.42□□□□□ -0.74
PNKP-226ENST00000636840 NEURL1BA8MQ27 555 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 PDE8AO60658 829 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 ALDH1L1O75891 902 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 BBOX1O75936 387 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 HOXA10P31260 410 aaPredicted RBP10.41□□□□□ -0.74
PNKP-226ENST00000636840 RARSP54136 660 aaKnown RBP10.41□□□□□ -0.74
PNKP-226ENST00000636840 GRIPAP1Q4V328 841 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
PNKP-226ENST00000636840 C9orf78Q9NZ63 289 aaPredicted RBP10.41□□□□□ -0.74
PNKP-226ENST00000636840 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
PNKP-226ENST00000636840 HDAC5Q9UQL6 1122 aa10.41□□□□□ -0.74
PNKP-226ENST00000636840 ADCY9O60503 1353 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 KIF13BQ9NQT8 1826 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 KIF16BQ96L93 1317 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 F6X3S4 739 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 C21orf2O43822 256 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 IGKV5-2P06315 115 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 YY1P25490 414 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
PNKP-226ENST00000636840 GCKRQ14397 625 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 SF3B3Q15393 1217 aaKnown RBP10.4□□□□□ -0.74
PNKP-226ENST00000636840 CWF19L2Q2TBE0 894 aaKnown RBP10.4□□□□□ -0.74
PNKP-226ENST00000636840 CRY2Q49AN0 593 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 CCDC152Q4G0S7 254 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 RTKN2Q8IZC4 609 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 NRXN2Q9P2S2 1712 aa10.4□□□□□ -0.74
PNKP-226ENST00000636840 RIC1Q4ADV7 1423 aa10.4□□□□□ -0.75
PNKP-226ENST00000636840 H7C1W4 665 aa10.39□□□□□ -0.75
PNKP-226ENST00000636840 CCDC93Q567U6 631 aa10.39□□□□□ -0.75
PNKP-226ENST00000636840 BEND3Q5T5X7 828 aa10.39□□□□□ -0.75
PNKP-226ENST00000636840 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
PNKP-226ENST00000636840 TMC4Q7Z404 712 aa10.39□□□□□ -0.75
PNKP-226ENST00000636840 SYNE4Q8N205 404 aa10.39□□□□□ -0.75
PNKP-226ENST00000636840 ARHGAP45Q92619 1136 aa10.39□□□□□ -0.75
PNKP-226ENST00000636840 NOB1Q9ULX3 412 aaKnown RBP10.39□□□□□ -0.75
PNKP-226ENST00000636840 CDHR2Q9BYE9 1310 aa10.38□□□□□ -0.75
PNKP-226ENST00000636840 CCT4P50991 539 aaKnown RBP10.38□□□□□ -0.75
PNKP-226ENST00000636840 UBE3BQ7Z3V4 1068 aa10.38□□□□□ -0.75
PNKP-226ENST00000636840 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
PNKP-226ENST00000636840 N4BP2Q86UW6 1770 aaPredicted RBP10.38□□□□□ -0.75
PNKP-226ENST00000636840 ABCC12Q96J65 1359 aa10.38□□□□□ -0.75
PNKP-226ENST00000636840 MS4A1P11836 297 aa10.37□□□□□ -0.75
PNKP-226ENST00000636840 RPS8P62241 208 aaKnown RBP10.37□□□□□ -0.75
PNKP-226ENST00000636840 GRAPQ13588 217 aa10.37□□□□□ -0.75
PNKP-226ENST00000636840 GRAPLQ8TC17 118 aaPredicted RBP10.37□□□□□ -0.75
PNKP-226ENST00000636840 JARID2Q92833 1246 aaPredicted RBP10.37□□□□□ -0.75
PNKP-226ENST00000636840 GRM8O00222 908 aa10.36□□□□□ -0.75
PNKP-226ENST00000636840 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
PNKP-226ENST00000636840 LMNB1P20700 586 aa10.36□□□□□ -0.75
PNKP-226ENST00000636840 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
PNKP-226ENST00000636840 SP8Q8IXZ3 490 aa10.36□□□□□ -0.75
PNKP-226ENST00000636840 SUPT20HQ8NEM7 779 aa10.36□□□□□ -0.75
PNKP-226ENST00000636840 CDC5LQ99459 802 aaKnown RBP10.36□□□□□ -0.75
PNKP-226ENST00000636840 TAOK3Q9H2K8 898 aa10.36□□□□□ -0.75
PNKP-226ENST00000636840 ANKRD36CQ5JPF3 1778 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 ARFGEF2Q9Y6D5 1785 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 BCAR3O75815 825 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms