RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZSCAN23Q3MJ62 389 aa22.8■■□□□ 1.24
CLN5-216ENST00000636780 ZNF589Q86UQ0 364 aaPredicted RBP22.8■■□□□ 1.24
CLN5-216ENST00000636780 SEC62Q99442 399 aaKnown RBP22.8■■□□□ 1.24
CLN5-216ENST00000636780 TTC41PQ6P2S7 1318 aa22.8■■□□□ 1.24
CLN5-216ENST00000636780 KCNJ4P48050 445 aa22.8■■□□□ 1.24
CLN5-216ENST00000636780 ZNF594Q96JF6 807 aaPredicted RBP22.8■■□□□ 1.24
CLN5-216ENST00000636780 FSD1Q9BTV5 496 aa22.8■■□□□ 1.24
CLN5-216ENST00000636780 TNS3Q68CZ2 1445 aa22.79■■□□□ 1.24
CLN5-216ENST00000636780 PTPN12Q05209 780 aaKnown RBP22.79■■□□□ 1.24
CLN5-216ENST00000636780 LMBR1LQ6UX01 489 aa22.79■■□□□ 1.24
CLN5-216ENST00000636780 CCDC129Q6ZRS4 1044 aa22.79■■□□□ 1.24
CLN5-216ENST00000636780 TMEM63CQ9P1W3 806 aa22.79■■□□□ 1.24
CLN5-216ENST00000636780 DNAJC2Q99543 621 aaKnown RBP22.79■■□□□ 1.24
CLN5-216ENST00000636780 DBNLQ9UJU6 430 aaKnown RBP22.79■■□□□ 1.24
CLN5-216ENST00000636780 BRD1O95696 1058 aa22.78■■□□□ 1.24
CLN5-216ENST00000636780 CCDC83Q8IWF9 413 aa22.78■■□□□ 1.24
CLN5-216ENST00000636780 ZCRB1Q8TBF4 217 aaKnown RBP22.78■■□□□ 1.24
CLN5-216ENST00000636780 TTC14Q96N46 770 aa22.78■■□□□ 1.24
CLN5-216ENST00000636780 UTYO14607 1347 aa22.78■■□□□ 1.24
CLN5-216ENST00000636780 PRIM1P49642 420 aaKnown RBP22.78■■□□□ 1.24
CLN5-216ENST00000636780 DBNDD2Q9BQY9 259 aa22.78■■□□□ 1.24
CLN5-216ENST00000636780 RBM8AQ9Y5S9 174 aaKnown RBP22.77■■□□□ 1.24
CLN5-216ENST00000636780 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
CLN5-216ENST00000636780 N4BP2Q86UW6 1770 aaPredicted RBP22.77■■□□□ 1.24
CLN5-216ENST00000636780 SYCE3A1L190 88 aa22.76■■□□□ 1.23
CLN5-216ENST00000636780 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
CLN5-216ENST00000636780 RFX5P48382 616 aaPredicted RBP22.76■■□□□ 1.23
CLN5-216ENST00000636780 TIMM10P62072 90 aa22.76■■□□□ 1.23
CLN5-216ENST00000636780 ERC1Q8IUD2 1116 aa22.76■■□□□ 1.23
CLN5-216ENST00000636780 EVI5LQ96CN4 794 aa22.76■■□□□ 1.23
CLN5-216ENST00000636780 GPATCH3Q96I76 525 aa22.76■■□□□ 1.23
CLN5-216ENST00000636780 ERBB4Q15303 1308 aa22.75■■□□□ 1.23
CLN5-216ENST00000636780 SIPA1L3O60292 1781 aaPredicted RBP22.75■■□□□ 1.23
CLN5-216ENST00000636780 DDX46Q7L014 1031 aaKnown RBP22.75■■□□□ 1.23
CLN5-216ENST00000636780 RBSNQ9H1K0 784 aa22.75■■□□□ 1.23
CLN5-216ENST00000636780 NEUROD6Q96NK8 337 aa22.75■■□□□ 1.23
CLN5-216ENST00000636780 RNF214Q8ND24 703 aa22.74■■□□□ 1.23
CLN5-216ENST00000636780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLN5-216ENST00000636780 EVA1CP58658 441 aa22.74■■□□□ 1.23
CLN5-216ENST00000636780 SYNE4Q8N205 404 aa22.74■■□□□ 1.23
CLN5-216ENST00000636780 MCM2P49736 904 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 COL18A1P39060 1754 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 CAMTA1Q9Y6Y1 1673 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 CCDC171Q6TFL3 1326 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 NECTIN1Q15223 517 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 CREB3L3Q68CJ9 461 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 FAM43AQ8N2R8 423 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 PDRG1Q9NUG6 133 aa22.73■■□□□ 1.23
CLN5-216ENST00000636780 PPFIA3O75145 1194 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 ST3GAL1Q11201 340 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 STK3Q13188 491 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 TNNI3KQ59H18 835 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 CNPY2Q9Y2B0 182 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 FPGT-TNNI3KV9GXZ4 949 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 NASPP49321 788 aaPredicted RBP22.72■■□□□ 1.23
CLN5-216ENST00000636780 LRRC24Q50LG9 513 aa22.72■■□□□ 1.23
CLN5-216ENST00000636780 ME3Q16798 604 aa22.71■■□□□ 1.23
CLN5-216ENST00000636780 PUS3Q9BZE2 481 aaKnown RBP22.71■■□□□ 1.23
CLN5-216ENST00000636780 LIMCH1Q9UPQ0 1083 aa22.71■■□□□ 1.23
CLN5-216ENST00000636780 RPAP1Q9BWH6 1393 aaPredicted RBP22.71■■□□□ 1.23
CLN5-216ENST00000636780 USP48Q86UV5 1035 aa22.71■■□□□ 1.23
CLN5-216ENST00000636780 ASAP1Q9ULH1 1129 aa22.71■■□□□ 1.23
CLN5-216ENST00000636780 KAT6BQ8WYB5 2073 aa22.71■■□□□ 1.23
CLN5-216ENST00000636780 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
CLN5-216ENST00000636780 KIF1AQ12756 1690 aa22.7■■□□□ 1.23
CLN5-216ENST00000636780 WDR17Q8IZU2 1322 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 A0A0G2JLW4 131 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 SYT1P21579 422 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 FAM173BQ6P4H8 233 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 RUFY2Q8WXA3 655 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 COL15A1P39059 1388 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 CASP7P55210 303 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 TPCN1Q9ULQ1 816 aa22.7■■□□□ 1.22
CLN5-216ENST00000636780 SLC27A2O14975 620 aa22.69■■□□□ 1.22
CLN5-216ENST00000636780 FOXO4P98177 505 aa22.69■■□□□ 1.22
CLN5-216ENST00000636780 PLBD2Q8NHP8 589 aa22.69■■□□□ 1.22
CLN5-216ENST00000636780 INTS4Q96HW7 963 aaKnown RBP22.69■■□□□ 1.22
CLN5-216ENST00000636780 A0A0G2JS52 829 aa22.68■■□□□ 1.22
CLN5-216ENST00000636780 GJB2P29033 226 aa22.68■■□□□ 1.22
CLN5-216ENST00000636780 FERMT3Q86UX7 667 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 MAP4K1Q92918 833 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 COPRSQ9NQ92 184 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 SMC3Q9UQE7 1217 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 IL2RBP14784 551 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 MPNDQ8N594 471 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 CYP46A1Q9Y6A2 500 aa22.67■■□□□ 1.22
CLN5-216ENST00000636780 HDAC5Q9UQL6 1122 aa22.66■■□□□ 1.22
CLN5-216ENST00000636780 FIBPO43427 364 aa22.66■■□□□ 1.22
CLN5-216ENST00000636780 ZSWIM6Q9HCJ5 1215 aa22.66■■□□□ 1.22
CLN5-216ENST00000636780 FAM89AQ96GI7 184 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 VPS37CA5D8V6 355 aaPredicted RBP22.65■■□□□ 1.22
CLN5-216ENST00000636780 SYTL4Q96C24 671 aaPredicted RBP22.65■■□□□ 1.22
CLN5-216ENST00000636780 SNRKQ9NRH2 765 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 ADAMTS7Q9UKP4 1686 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 GOLIM4O00461 696 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 PTMSP20962 102 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 VPS53Q5VIR6 699 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 ATG9AQ7Z3C6 839 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms