RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 MYD88Q99836 296 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 AOX1Q06278 1338 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
CACNA1A-228ENST00000636610 ZNF500O60304 480 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-228ENST00000636610 UBE2HP62256 183 aa16.77■□□□□ 0.28
CACNA1A-228ENST00000636610 AP5Z1O43299 807 aa16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 CABLES1Q8TDN4 633 aa16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 PXDNQ92626 1479 aa16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-228ENST00000636610 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 HS1BP3Q53T59 392 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 SLC27A2O14975 620 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 LIG1P18858 919 aa16.75■□□□□ 0.27
CACNA1A-228ENST00000636610 JAK2O60674 1132 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 FBXW7Q969H0 707 aa16.74■□□□□ 0.27
CACNA1A-228ENST00000636610 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 LARP1Q6PKG0 1096 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 FGD1P98174 961 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
CACNA1A-228ENST00000636610 A0A087WWV3 80 aa16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 LUZP1Q86V48 1076 aa16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 ZMYND15Q9H091 742 aa16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 TFCP2Q12800 502 aa16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-228ENST00000636610 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
CACNA1A-228ENST00000636610 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
CACNA1A-228ENST00000636610 DDX58O95786 925 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-228ENST00000636610 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
CACNA1A-228ENST00000636610 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
CACNA1A-228ENST00000636610 ALDH1L1O75891 902 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 PDIA6Q15084 440 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 ARHGEF25Q86VW2 580 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 ANKLE2Q86XL3 938 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 MAP4K1Q92918 833 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 DACT1Q9NYF0 836 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 KDM4AO75164 1064 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 ZNF790Q6PG37 636 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 DBNDD2Q9BQY9 259 aa16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1A-228ENST00000636610 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 HOXB7P09629 217 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 DRC7Q8IY82 874 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 DBNLQ9UJU6 430 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 KRT85P78386 507 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 MTX1Q13505 466 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 BICD2Q8TD16 824 aa16.69■□□□□ 0.26
CACNA1A-228ENST00000636610 NEURL1BA8MQ27 555 aa16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 PYCARDQ9ULZ3 195 aa16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 SPATA32Q96LK8 384 aa16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 SH2B1Q9NRF2 756 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-228ENST00000636610 GCKRQ14397 625 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 TMEM87AQ8NBN3 555 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 A0A087WZG4 1122 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 SASS6Q6UVJ0 657 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms