RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 CFHR5Q9BXR6 569 aa8.42□□□□□ -1.06
CLN8-210ENST00000636605 KDM5DQ9BY66 1539 aa8.42□□□□□ -1.06
CLN8-210ENST00000636605 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
CLN8-210ENST00000636605 GDF11O95390 407 aa8.41□□□□□ -1.06
CLN8-210ENST00000636605 INHAP05111 366 aa8.41□□□□□ -1.06
CLN8-210ENST00000636605 ITGAEP38570 1179 aa8.41□□□□□ -1.06
CLN8-210ENST00000636605 PHKA2P46019 1235 aa8.41□□□□□ -1.06
CLN8-210ENST00000636605 TMEM214Q6NUQ4 689 aaKnown RBP8.41□□□□□ -1.06
CLN8-210ENST00000636605 GPAMQ9HCL2 828 aa8.41□□□□□ -1.06
CLN8-210ENST00000636605 ZC3H13Q5T200 1668 aaKnown RBP8.4□□□□□ -1.06
CLN8-210ENST00000636605 UHRF1BP1Q6BDS2 1440 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 PIK3CDO00329 1044 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 MX2P20592 715 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 MSX1P28360 303 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 CEBPAP49715 358 aaPredicted RBP8.4□□□□□ -1.06
CLN8-210ENST00000636605 GDF10P55107 478 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 SEMA3FQ13275 785 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 CRISPLD1Q9H336 500 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 ALG2Q9H553 416 aa8.4□□□□□ -1.06
CLN8-210ENST00000636605 BCRP11274 1271 aa8.39□□□□□ -1.07
CLN8-210ENST00000636605 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
CLN8-210ENST00000636605 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
CLN8-210ENST00000636605 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
CLN8-210ENST00000636605 C3P01024 1663 aa8.39□□□□□ -1.07
CLN8-210ENST00000636605 CLTCQ00610 1675 aaKnown RBP8.39□□□□□ -1.07
CLN8-210ENST00000636605 PRDM15P57071 1507 aaPredicted RBP8.39□□□□□ -1.07
CLN8-210ENST00000636605 PZPP20742 1482 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 ARHGAP31Q2M1Z3 1444 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 PREX1Q8TCU6 1659 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 TMEM229AB2RXF0 380 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 ATP4AP20648 1035 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 GTF2E1P29083 439 aaPredicted RBP8.38□□□□□ -1.07
CLN8-210ENST00000636605 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
CLN8-210ENST00000636605 NFATC2IPQ8NCF5 419 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 ENAMQ9NRM1 1142 aa8.38□□□□□ -1.07
CLN8-210ENST00000636605 IQSEC3Q9UPP2 1182 aaPredicted RBP8.38□□□□□ -1.07
CLN8-210ENST00000636605 DNMT3AQ9Y6K1 912 aaPredicted RBP8.38□□□□□ -1.07
CLN8-210ENST00000636605 PTPRKQ15262 1439 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 DEPDC5O75140 1603 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 IRS1P35568 1242 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 MAP2K3P46734 347 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 MTFR1Q15390 333 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 RUBCNLQ9H714 662 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
CLN8-210ENST00000636605 NSFL1CQ9UNZ2 370 aaKnown RBP8.37□□□□□ -1.07
CLN8-210ENST00000636605 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
CLN8-210ENST00000636605 ABCC3O15438 1527 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 LMTK2Q8IWU2 1503 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 OIP5O43482 229 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 SMTNP53814 917 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 ATXN7L1Q9ULK2 861 aaPredicted RBP8.36□□□□□ -1.07
CLN8-210ENST00000636605 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 NLRP1Q9C000 1473 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
CLN8-210ENST00000636605 TNRQ92752 1358 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 RPRD2Q5VT52 1461 aaKnown RBP8.35□□□□□ -1.07
CLN8-210ENST00000636605 CSB-PGBD3P0DP91 1061 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 THEMISQ8N1K5 641 aaPredicted RBP8.35□□□□□ -1.07
CLN8-210ENST00000636605 PGBD3Q8N328 593 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 C1orf216Q8TAB5 229 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 OXCT2Q9BYC2 517 aaPredicted RBP8.35□□□□□ -1.07
CLN8-210ENST00000636605 SLC52A1Q9NWF4 448 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 PHF24Q9UPV7 400 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 NUP155O75694 1391 aa8.35□□□□□ -1.07
CLN8-210ENST00000636605 MROH1Q8NDA8 1641 aa8.34□□□□□ -1.07
CLN8-210ENST00000636605 EFHC2Q5JST6 749 aa8.34□□□□□ -1.07
CLN8-210ENST00000636605 TBC1D9Q6ZT07 1266 aa8.34□□□□□ -1.07
CLN8-210ENST00000636605 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
CLN8-210ENST00000636605 LZTS3O60299 673 aaPredicted RBP8.33□□□□□ -1.08
CLN8-210ENST00000636605 NAIPQ13075 1403 aa8.33□□□□□ -1.08
CLN8-210ENST00000636605 VWDEQ8N2E2 1590 aa8.33□□□□□ -1.08
CLN8-210ENST00000636605 ADAMTS19Q8TE59 1207 aa8.33□□□□□ -1.08
CLN8-210ENST00000636605 KLRG1Q96E93 195 aa8.33□□□□□ -1.08
CLN8-210ENST00000636605 NIFKQ9BYG3 293 aaKnown RBP8.33□□□□□ -1.08
CLN8-210ENST00000636605 CAMSAP1Q5T5Y3 1602 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 UNC13BO14795 1591 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 SPATA31D1Q6ZQQ2 1576 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 A6NJY4 79 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 CDK2AP1O14519 115 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 C2CD2LO14523 706 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 BNIP3LO60238 219 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 EML3Q32P44 896 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 C1orf229Q6ZS94 237 aaPredicted RBP8.32□□□□□ -1.08
CLN8-210ENST00000636605 ABHD17AQ96GS6 310 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 HCN2Q9UL51 889 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
CLN8-210ENST00000636605 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 SKIP12755 728 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 FGFR3P22607 806 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 HSPA2P54652 639 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 FLIIQ13045 1269 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 NCOA4Q13772 614 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 NLRP8Q86W28 1048 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 ZDHHC3Q9NYG2 299 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms