RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 KLHL34Q8N239 644 aa19.23■□□□□ 0.67
CLN8-209ENST00000635970 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
CLN8-209ENST00000635970 ATP10DQ9P241 1426 aa19.22■□□□□ 0.67
CLN8-209ENST00000635970 GPTP24298 496 aa19.22■□□□□ 0.67
CLN8-209ENST00000635970 ANKRD13DQ6ZTN6 518 aa19.22■□□□□ 0.67
CLN8-209ENST00000635970 PLBD2Q8NHP8 589 aa19.22■□□□□ 0.67
CLN8-209ENST00000635970 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
CLN8-209ENST00000635970 NIP7Q9Y221 180 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLN8-209ENST00000635970 CARMIL3Q8ND23 1372 aa19.22■□□□□ 0.67
CLN8-209ENST00000635970 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
CLN8-209ENST00000635970 FLIIQ13045 1269 aa19.21■□□□□ 0.67
CLN8-209ENST00000635970 ADCY9O60503 1353 aa19.21■□□□□ 0.67
CLN8-209ENST00000635970 ANKRD31Q8N7Z5 1873 aa19.21■□□□□ 0.67
CLN8-209ENST00000635970 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
CLN8-209ENST00000635970 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
CLN8-209ENST00000635970 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
CLN8-209ENST00000635970 RIC3Q7Z5B4 369 aa19.2■□□□□ 0.66
CLN8-209ENST00000635970 FHDC1Q9C0D6 1143 aaPredicted RBP19.2■□□□□ 0.66
CLN8-209ENST00000635970 KIAA1551Q9HCM1 1747 aa19.2■□□□□ 0.66
CLN8-209ENST00000635970 N4BP2Q86UW6 1770 aaPredicted RBP19.19■□□□□ 0.66
CLN8-209ENST00000635970 RGL2O15211 777 aa19.19■□□□□ 0.66
CLN8-209ENST00000635970 SERPINB2P05120 415 aa19.19■□□□□ 0.66
CLN8-209ENST00000635970 MRPL50Q8N5N7 158 aaKnown RBP19.19■□□□□ 0.66
CLN8-209ENST00000635970 PDZRN3Q9UPQ7 1066 aa19.19■□□□□ 0.66
CLN8-209ENST00000635970 C10orf71Q711Q0 1435 aa19.19■□□□□ 0.66
CLN8-209ENST00000635970 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
CLN8-209ENST00000635970 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
CLN8-209ENST00000635970 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
CLN8-209ENST00000635970 PI4KAP2A4QPH2 592 aa19.18■□□□□ 0.66
CLN8-209ENST00000635970 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
CLN8-209ENST00000635970 PI4KAP1Q8N8J0 262 aa19.18■□□□□ 0.66
CLN8-209ENST00000635970 SMC4Q9NTJ3 1288 aa19.18■□□□□ 0.66
CLN8-209ENST00000635970 MAP3K2Q9Y2U5 619 aa19.18■□□□□ 0.66
CLN8-209ENST00000635970 UTRNP46939 3433 aa19.18■□□□□ 0.66
CLN8-209ENST00000635970 DDX58O95786 925 aaKnown RBP19.17■□□□□ 0.66
CLN8-209ENST00000635970 ATP5J2-PTCD1G3V325 749 aa19.17■□□□□ 0.66
CLN8-209ENST00000635970 TCIRG1Q13488 830 aa19.17■□□□□ 0.66
CLN8-209ENST00000635970 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
CLN8-209ENST00000635970 ALDH1L2Q3SY69 923 aa19.17■□□□□ 0.66
CLN8-209ENST00000635970 TBC1D2Q9BYX2 928 aa19.17■□□□□ 0.66
CLN8-209ENST00000635970 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
CLN8-209ENST00000635970 PRR5LQ6MZQ0 368 aa19.16■□□□□ 0.66
CLN8-209ENST00000635970 KSR2Q6VAB6 950 aa19.16■□□□□ 0.66
CLN8-209ENST00000635970 COL11A2P13942 1736 aaPredicted RBP19.16■□□□□ 0.66
CLN8-209ENST00000635970 F6X3S4 739 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 NBPF5PQ86XG9 351 aaPredicted RBP19.15■□□□□ 0.66
CLN8-209ENST00000635970 MYD88Q99836 296 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 SLKQ9H2G2 1235 aaPredicted RBP19.15■□□□□ 0.66
CLN8-209ENST00000635970 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 CNBD1Q8NA66 436 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 NLGN2Q8NFZ4 835 aa19.15■□□□□ 0.66
CLN8-209ENST00000635970 NLRP10Q86W26 655 aa19.14■□□□□ 0.65
CLN8-209ENST00000635970 NUTM1Q86Y26 1132 aa19.14■□□□□ 0.65
CLN8-209ENST00000635970 SYT17Q9BSW7 474 aa19.14■□□□□ 0.65
CLN8-209ENST00000635970 METTL22Q9BUU2 404 aaPredicted RBP19.14■□□□□ 0.65
CLN8-209ENST00000635970 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.14■□□□□ 0.65
CLN8-209ENST00000635970 NPHP1O15259 732 aa19.13■□□□□ 0.65
CLN8-209ENST00000635970 ISCA1Q9BUE6 129 aa19.13■□□□□ 0.65
CLN8-209ENST00000635970 ABCC12Q96J65 1359 aa19.13■□□□□ 0.65
CLN8-209ENST00000635970 RLBP1P12271 317 aa19.13■□□□□ 0.65
CLN8-209ENST00000635970 HDAC1Q13547 482 aaPredicted RBP19.13■□□□□ 0.65
CLN8-209ENST00000635970 CHMP5Q9NZZ3 219 aa19.13■□□□□ 0.65
CLN8-209ENST00000635970 DDX60Q8IY21 1712 aaKnown RBP19.12■□□□□ 0.65
CLN8-209ENST00000635970 PXDNLA1KZ92 1463 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 DLEC1Q9Y238 1755 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 BRCA1P38398 1863 aaKnown RBP19.12■□□□□ 0.65
CLN8-209ENST00000635970 NTSR2O95665 410 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 DNAAF4Q8WXU2 420 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 ISY1Q9ULR0 285 aaKnown RBP19.12■□□□□ 0.65
CLN8-209ENST00000635970 LAMB2P55268 1798 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 CWF19L2Q2TBE0 894 aaKnown RBP19.12■□□□□ 0.65
CLN8-209ENST00000635970 PARP10Q53GL7 1025 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
CLN8-209ENST00000635970 CD2APQ9Y5K6 639 aa19.12■□□□□ 0.65
CLN8-209ENST00000635970 CACNA1SQ13698 1873 aa19.11■□□□□ 0.65
CLN8-209ENST00000635970 IGKV5-2P06315 115 aa19.11■□□□□ 0.65
CLN8-209ENST00000635970 IBTKQ9P2D0 1353 aaPredicted RBP19.11■□□□□ 0.65
CLN8-209ENST00000635970 FSD2A1L4K1 749 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 GOLGA6L3A6NEY3 463 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 MCM4P33991 863 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 ERFEQ4G0M1 354 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 TPTE2Q6XPS3 522 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 PPP1R42Q7Z4L9 355 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 NOB1Q9ULX3 412 aaKnown RBP19.1■□□□□ 0.65
CLN8-209ENST00000635970 PTPRCP08575 1304 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 ST5P78524 1137 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
CLN8-209ENST00000635970 NYXQ9GZU5 481 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 DDX19BQ9UMR2 479 aa19.1■□□□□ 0.65
CLN8-209ENST00000635970 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
CLN8-209ENST00000635970 NEXNQ0ZGT2 675 aa19.09■□□□□ 0.65
CLN8-209ENST00000635970 UTP14AQ9BVJ6 771 aaKnown RBP19.09■□□□□ 0.65
CLN8-209ENST00000635970 C22orf23Q9BZE7 217 aa19.09■□□□□ 0.65
CLN8-209ENST00000635970 TRMT112Q9UI30 125 aaKnown RBP19.09■□□□□ 0.65
CLN8-209ENST00000635970 CHRNA5P30532 468 aa19.08■□□□□ 0.65
CLN8-209ENST00000635970 BRPF1P55201 1214 aaPredicted RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms