RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 COL24A1Q17RW2 1714 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 CHRNA5P30532 468 aa10.84□□□□□ -0.67
CDKL5-209ENST00000635828 NLGN1Q8N2Q7 840 aa10.84□□□□□ -0.67
CDKL5-209ENST00000635828 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
CDKL5-209ENST00000635828 EPHA10Q5JZY3 1008 aa10.84□□□□□ -0.67
CDKL5-209ENST00000635828 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
CDKL5-209ENST00000635828 NBPF5PQ86XG9 351 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-209ENST00000635828 MEIS3Q99687 375 aa10.84□□□□□ -0.67
CDKL5-209ENST00000635828 BRPF1P55201 1214 aaPredicted RBP10.83□□□□□ -0.68
CDKL5-209ENST00000635828 CLEC4GQ6UXB4 293 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 TRMT112Q9UI30 125 aaKnown RBP10.83□□□□□ -0.68
CDKL5-209ENST00000635828 DDX60Q8IY21 1712 aaKnown RBP10.83□□□□□ -0.68
CDKL5-209ENST00000635828 ATP10DQ9P241 1426 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 ZKSCAN2Q63HK3 967 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 KAZALD1Q96I82 304 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 FHDC1Q9C0D6 1143 aaPredicted RBP10.83□□□□□ -0.68
CDKL5-209ENST00000635828 SPON1Q9HCB6 807 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 ABCC4O15439 1325 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 A0A0G2JLW4 131 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 DDX58O95786 925 aaKnown RBP10.83□□□□□ -0.68
CDKL5-209ENST00000635828 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
CDKL5-209ENST00000635828 GCKRQ14397 625 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 USP44Q9H0E7 712 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 PTPRCP08575 1304 aa10.83□□□□□ -0.68
CDKL5-209ENST00000635828 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
CDKL5-209ENST00000635828 NRXN2Q9P2S2 1712 aa10.82□□□□□ -0.68
CDKL5-209ENST00000635828 COL11A2P13942 1736 aaPredicted RBP10.82□□□□□ -0.68
CDKL5-209ENST00000635828 LAMB2P55268 1798 aa10.82□□□□□ -0.68
CDKL5-209ENST00000635828 PARP3Q9Y6F1 533 aa10.82□□□□□ -0.68
CDKL5-209ENST00000635828 KIF16BQ96L93 1317 aa10.82□□□□□ -0.68
CDKL5-209ENST00000635828 ZNF652Q9Y2D9 606 aa10.82□□□□□ -0.68
CDKL5-209ENST00000635828 NPHP1O15259 732 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 CASP7P55210 303 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 ITPRIPQ8IWB1 547 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 CNBD1Q8NA66 436 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 SLC16A10Q8TF71 515 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 DZIP1LQ8IYY4 767 aaKnown RBP10.81□□□□□ -0.68
CDKL5-209ENST00000635828 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 SRCIN1Q9C0H9 1055 aa10.81□□□□□ -0.68
CDKL5-209ENST00000635828 CWC25Q9NXE8 425 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-209ENST00000635828 PCNTO95613 3336 aa10.8□□□□□ -0.68
CDKL5-209ENST00000635828 KIAA1551Q9HCM1 1747 aa10.8□□□□□ -0.68
CDKL5-209ENST00000635828 SUCLG2Q96I99 432 aa10.8□□□□□ -0.68
CDKL5-209ENST00000635828 UTP14AQ9BVJ6 771 aaKnown RBP10.8□□□□□ -0.68
CDKL5-209ENST00000635828 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
CDKL5-209ENST00000635828 FTSJ3Q8IY81 847 aaKnown RBP10.8□□□□□ -0.68
CDKL5-209ENST00000635828 KCNA3P22001 575 aa10.8□□□□□ -0.68
CDKL5-209ENST00000635828 NEXNQ0ZGT2 675 aa10.8□□□□□ -0.68
CDKL5-209ENST00000635828 KLHDC4Q8TBB5 520 aa10.8□□□□□ -0.68
CDKL5-209ENST00000635828 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-209ENST00000635828 CRBNQ96SW2 442 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 SEC31BQ9NQW1 1179 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-209ENST00000635828 IRS4O14654 1257 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-209ENST00000635828 ZBTB38Q8NAP3 1195 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-209ENST00000635828 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 GRM8O00222 908 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 POLD1P28340 1107 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 ARHGAP45Q92619 1136 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 SYT17Q9BSW7 474 aa10.79□□□□□ -0.68
CDKL5-209ENST00000635828 H7C1W4 665 aa10.78□□□□□ -0.68
CDKL5-209ENST00000635828 DPEP1P16444 411 aa10.78□□□□□ -0.68
CDKL5-209ENST00000635828 INTS3Q68E01 1043 aaKnown RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 TPTE2Q6XPS3 522 aa10.78□□□□□ -0.68
CDKL5-209ENST00000635828 API5Q9BZZ5 524 aaKnown RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 C9orf78Q9NZ63 289 aaPredicted RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
CDKL5-209ENST00000635828 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 TRIM28Q13263 835 aaKnown RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 BICC1Q9H694 974 aaKnown RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 LRRFIP2Q9Y608 721 aaKnown RBP10.78□□□□□ -0.68
CDKL5-209ENST00000635828 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
CDKL5-209ENST00000635828 FOXO4P98177 505 aa10.77□□□□□ -0.68
CDKL5-209ENST00000635828 PPP1R42Q7Z4L9 355 aa10.77□□□□□ -0.68
CDKL5-209ENST00000635828 EXOC6Q8TAG9 804 aa10.77□□□□□ -0.68
CDKL5-209ENST00000635828 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.68
CDKL5-209ENST00000635828 RNF123Q5XPI4 1314 aa10.77□□□□□ -0.69
CDKL5-209ENST00000635828 KIF13BQ9NQT8 1826 aa10.77□□□□□ -0.69
CDKL5-209ENST00000635828 IPO8O15397 1037 aaKnown RBP10.77□□□□□ -0.69
CDKL5-209ENST00000635828 HSP90AB3PQ58FF7 597 aa10.77□□□□□ -0.69
CDKL5-209ENST00000635828 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
CDKL5-209ENST00000635828 GREM2Q9H772 168 aa10.77□□□□□ -0.69
CDKL5-209ENST00000635828 PXDNLA1KZ92 1463 aa10.77□□□□□ -0.69
CDKL5-209ENST00000635828 SLX4Q8IY92 1834 aa10.76□□□□□ -0.69
CDKL5-209ENST00000635828 PCCAP05165 728 aaPredicted RBP10.76□□□□□ -0.69
CDKL5-209ENST00000635828 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
CDKL5-209ENST00000635828 PARP10Q53GL7 1025 aa10.76□□□□□ -0.69
CDKL5-209ENST00000635828 MYH3P11055 1940 aa10.76□□□□□ -0.69
CDKL5-209ENST00000635828 MVPQ14764 893 aaKnown RBP10.76□□□□□ -0.69
CDKL5-209ENST00000635828 CHMP4AQ9BY43 222 aa10.76□□□□□ -0.69
CDKL5-209ENST00000635828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.76□□□□□ -0.69
CDKL5-209ENST00000635828 CELF1Q92879 486 aaKnown RBP10.76□□□□□ -0.69
CDKL5-209ENST00000635828 PNMA6EA0A0J9YXQ4 647 aa10.75□□□□□ -0.69
CDKL5-209ENST00000635828 LMBR1LQ6UX01 489 aa10.75□□□□□ -0.69
CDKL5-209ENST00000635828 ANKRD44Q8N8A2 993 aa10.75□□□□□ -0.69
CDKL5-209ENST00000635828 TTLL11Q8NHH1 800 aa10.75□□□□□ -0.69
CDKL5-209ENST00000635828 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDKL5-209ENST00000635828 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
CDKL5-209ENST00000635828 SNAP23O00161 211 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms