RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-210ENST00000635675 GPR162Q16538 588 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 SSH1Q8WYL5 1049 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
LINC00339-210ENST00000635675 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 SLC10A5Q5PT55 438 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
LINC00339-210ENST00000635675 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
LINC00339-210ENST00000635675 MYD88Q99836 296 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
LINC00339-210ENST00000635675 SRGNP10124 158 aa12.44□□□□□ -0.42
LINC00339-210ENST00000635675 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-210ENST00000635675 ALDH1L2Q3SY69 923 aa12.44□□□□□ -0.42
LINC00339-210ENST00000635675 TRMT112Q9UI30 125 aaKnown RBP12.44□□□□□ -0.42
LINC00339-210ENST00000635675 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
LINC00339-210ENST00000635675 RIC1Q4ADV7 1423 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
LINC00339-210ENST00000635675 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 CCDC191Q8NCU4 936 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 BCS1LQ9Y276 419 aa12.43□□□□□ -0.42
LINC00339-210ENST00000635675 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-210ENST00000635675 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
LINC00339-210ENST00000635675 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
LINC00339-210ENST00000635675 F6X3S4 739 aa12.41□□□□□ -0.42
LINC00339-210ENST00000635675 NPR1P16066 1061 aa12.41□□□□□ -0.42
LINC00339-210ENST00000635675 RARSP54136 660 aaKnown RBP12.41□□□□□ -0.42
LINC00339-210ENST00000635675 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-210ENST00000635675 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
LINC00339-210ENST00000635675 ZBTB38Q8NAP3 1195 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-210ENST00000635675 ZNF622Q969S3 477 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00339-210ENST00000635675 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
LINC00339-210ENST00000635675 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
LINC00339-210ENST00000635675 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-210ENST00000635675 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
LINC00339-210ENST00000635675 PCCAP05165 728 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-210ENST00000635675 HCLS1P14317 486 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-210ENST00000635675 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-210ENST00000635675 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
LINC00339-210ENST00000635675 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
LINC00339-210ENST00000635675 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
LINC00339-210ENST00000635675 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
LINC00339-210ENST00000635675 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.42
LINC00339-210ENST00000635675 ARFGEF1Q9Y6D6 1849 aa12.4□□□□□ -0.43
LINC00339-210ENST00000635675 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-210ENST00000635675 BEND3Q5T5X7 828 aa12.39□□□□□ -0.43
LINC00339-210ENST00000635675 PTPRCP08575 1304 aa12.39□□□□□ -0.43
LINC00339-210ENST00000635675 H7C1W4 665 aa12.38□□□□□ -0.43
LINC00339-210ENST00000635675 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
LINC00339-210ENST00000635675 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
LINC00339-210ENST00000635675 GCKRQ14397 625 aa12.38□□□□□ -0.43
LINC00339-210ENST00000635675 SLX4Q8IY92 1834 aa12.38□□□□□ -0.43
LINC00339-210ENST00000635675 DDX60Q8IY21 1712 aaKnown RBP12.38□□□□□ -0.43
LINC00339-210ENST00000635675 SF3B3Q15393 1217 aaKnown RBP12.37□□□□□ -0.43
LINC00339-210ENST00000635675 PRPF40BQ6NWY9 871 aaKnown RBP12.37□□□□□ -0.43
LINC00339-210ENST00000635675 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
LINC00339-210ENST00000635675 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-210ENST00000635675 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
LINC00339-210ENST00000635675 CRAMP1Q96RY5 1269 aa12.37□□□□□ -0.43
LINC00339-210ENST00000635675 LAMB2P55268 1798 aa12.37□□□□□ -0.43
LINC00339-210ENST00000635675 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
LINC00339-210ENST00000635675 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
LINC00339-210ENST00000635675 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 C21orf2O43822 256 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 BCAR3O75815 825 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
LINC00339-210ENST00000635675 CASP7P55210 303 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 UBE3BQ7Z3V4 1068 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
LINC00339-210ENST00000635675 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 CHD4Q14839 1912 aa12.36□□□□□ -0.43
LINC00339-210ENST00000635675 UTRNP46939 3433 aa12.35□□□□□ -0.43
LINC00339-210ENST00000635675 PDE8AO60658 829 aa12.35□□□□□ -0.43
LINC00339-210ENST00000635675 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
LINC00339-210ENST00000635675 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
LINC00339-210ENST00000635675 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
LINC00339-210ENST00000635675 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
LINC00339-210ENST00000635675 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
LINC00339-210ENST00000635675 ABCC4O15439 1325 aa12.34□□□□□ -0.43
LINC00339-210ENST00000635675 GRM8O00222 908 aa12.33□□□□□ -0.44
LINC00339-210ENST00000635675 BBOX1O75936 387 aa12.33□□□□□ -0.44
LINC00339-210ENST00000635675 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
LINC00339-210ENST00000635675 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
LINC00339-210ENST00000635675 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
LINC00339-210ENST00000635675 KIF16BQ96L93 1317 aa12.33□□□□□ -0.44
LINC00339-210ENST00000635675 NFKBIEO00221 500 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms