RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	RGL2	O15211	777 aa		13.66	□□□□□ -0.22
UBE3A-223	ENST00000631247	LTBP3	Q9NS15	1303 aa		13.65	□□□□□ -0.22
UBE3A-223	ENST00000631247	NPR1	P16066	1061 aa		13.65	□□□□□ -0.22
UBE3A-223	ENST00000631247	CCDC93	Q567U6	631 aa		13.65	□□□□□ -0.22
UBE3A-223	ENST00000631247	THUMPD2	Q9BTF0	503 aa	Known RBP	13.65	□□□□□ -0.22
UBE3A-223	ENST00000631247	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.65	□□□□□ -0.22
UBE3A-223	ENST00000631247	MYL6B	P14649	208 aa		13.64	□□□□□ -0.23
UBE3A-223	ENST00000631247	MS4A3	Q96HJ5	214 aa		13.64	□□□□□ -0.23
UBE3A-223	ENST00000631247	PLEKHF1	Q96S99	279 aa		13.64	□□□□□ -0.23
UBE3A-223	ENST00000631247	NYX	Q9GZU5	481 aa		13.64	□□□□□ -0.23
UBE3A-223	ENST00000631247	RRP7A	Q9Y3A4	280 aa	Known RBP	13.64	□□□□□ -0.23
UBE3A-223	ENST00000631247	NUP98	P52948	1817 aa		13.64	□□□□□ -0.23
UBE3A-223	ENST00000631247	EIF4A1	P60842	406 aa	Known RBP	13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	HTRA3	P83110	453 aa		13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	RALBP1	Q15311	655 aa		13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	HLF	Q16534	295 aa		13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	IFFO2	Q5TF58	517 aa		13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	TSPYL4	Q9UJ04	414 aa		13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	MAP3K15	Q6ZN16	1313 aa		13.63	□□□□□ -0.23
UBE3A-223	ENST00000631247	LMOD3	Q0VAK6	560 aa		13.62	□□□□□ -0.23
UBE3A-223	ENST00000631247	RASEF	Q8IZ41	740 aa		13.62	□□□□□ -0.23
UBE3A-223	ENST00000631247	DNAJC5G	Q8N7S2	189 aa		13.62	□□□□□ -0.23
UBE3A-223	ENST00000631247	ERVV-1	B6SEH8	477 aa		13.61	□□□□□ -0.23
UBE3A-223	ENST00000631247	GPT	P24298	496 aa		13.61	□□□□□ -0.23
UBE3A-223	ENST00000631247	ALDH1B1	P30837	517 aa		13.61	□□□□□ -0.23
UBE3A-223	ENST00000631247	KLRG1	Q96E93	195 aa		13.61	□□□□□ -0.23
UBE3A-223	ENST00000631247	ZBTB3	Q9H5J0	574 aa		13.61	□□□□□ -0.23
UBE3A-223	ENST00000631247	ERBB4	Q15303	1308 aa		13.61	□□□□□ -0.23
UBE3A-223	ENST00000631247	ABCC12	Q96J65	1359 aa		13.6	□□□□□ -0.23
UBE3A-223	ENST00000631247	RIPK4	P57078	832 aa		13.6	□□□□□ -0.23
UBE3A-223	ENST00000631247	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
UBE3A-223	ENST00000631247	NUTM1	Q86Y26	1132 aa		13.6	□□□□□ -0.23
UBE3A-223	ENST00000631247	RTKN2	Q8IZC4	609 aa		13.6	□□□□□ -0.23
UBE3A-223	ENST00000631247	RPGR	Q92834	1020 aa	Known RBP	13.6	□□□□□ -0.23
UBE3A-223	ENST00000631247	KLRG2	A4D1S0	409 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	IQCA1L	A6NCM1	817 aa		13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	DDN	O94850	711 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	WDR43	Q15061	677 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	TTLL7	Q6ZT98	887 aa		13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	KIF12	Q96FN5	646 aa		13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.59	□□□□□ -0.23
UBE3A-223	ENST00000631247	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.58	□□□□□ -0.23
UBE3A-223	ENST00000631247	EIF2S2	P20042	333 aa	Known RBP	13.58	□□□□□ -0.24
UBE3A-223	ENST00000631247	DDX10	Q13206	875 aa	Known RBP	13.58	□□□□□ -0.24
UBE3A-223	ENST00000631247	C7orf43	Q8WVR3	580 aa		13.58	□□□□□ -0.24
UBE3A-223	ENST00000631247	SCN4A	P35499	1836 aa		13.57	□□□□□ -0.24
UBE3A-223	ENST00000631247	UBN2	Q6ZU65	1347 aa		13.57	□□□□□ -0.24
UBE3A-223	ENST00000631247	RIC1	Q4ADV7	1423 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	ANKRD36C	Q5JPF3	1778 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	POTEC	B2RU33	542 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	IARS	P41252	1262 aa	Known RBP	13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	TMPO	P42166	694 aa	Known RBP	13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	NEUROD2	Q15784	382 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	OLFM4	Q6UX06	510 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	PPP1R42	Q7Z4L9	355 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	CCDC146	Q8IYE0	955 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	TMX4	Q9H1E5	349 aa	Predicted RBP	13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	BABAM1	Q9NWV8	329 aa		13.56	□□□□□ -0.24
UBE3A-223	ENST00000631247	CRY2	Q49AN0	593 aa		13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	PARP10	Q53GL7	1025 aa		13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	SUSD4	Q5VX71	490 aa		13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	ASTL	Q6HA08	431 aa	Predicted RBP	13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	JMY	Q8N9B5	988 aa		13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	RBM17	Q96I25	401 aa	Known RBP	13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	LAS1L	Q9Y4W2	734 aa	Known RBP	13.55	□□□□□ -0.24
UBE3A-223	ENST00000631247	NTSR2	O95665	410 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	CC2D2B	Q6DHV5	1058 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	LDHD	Q86WU2	507 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	SYNE4	Q8N205	404 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	JDP2	Q8WYK2	163 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	NECTIN2	Q92692	538 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	ZNF541	Q9H0D2	1346 aa		13.54	□□□□□ -0.24
UBE3A-223	ENST00000631247	TCERG1	O14776	1098 aa	Known RBP	13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	PPEF1	O14829	653 aa	Predicted RBP	13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	ATMIN	O43313	823 aa	Predicted RBP	13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	NUBP1	P53384	320 aa		13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	EAPP	Q56P03	285 aa	Predicted RBP	13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	HSP90AB3P	Q58FF7	597 aa		13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	ZNF34	Q8IZ26	560 aa		13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	NLRP3	Q96P20	1036 aa		13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	PSMD1	Q99460	953 aa		13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	HACL1	Q9UJ83	578 aa		13.53	□□□□□ -0.24
UBE3A-223	ENST00000631247	MAP3K13	O43283	966 aa		13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	ANXA1	P04083	346 aa		13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	POTEJ	P0CG39	1038 aa		13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	HOXA10	P31260	410 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	VASP	P50552	380 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	EIF6	P56537	245 aa	Known RBP	13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	AIMP1	Q12904	312 aa	Known RBP	13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	GRIPAP1	Q4V328	841 aa		13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	RUNDC1	Q96C34	613 aa		13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	UTP14A	Q9BVJ6	771 aa	Known RBP	13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	RNF123	Q5XPI4	1314 aa		13.52	□□□□□ -0.25
UBE3A-223	ENST00000631247	PDIA6	Q15084	440 aa		13.51	□□□□□ -0.25
UBE3A-223	ENST00000631247	PROSER3	Q2NL68	480 aa		13.51	□□□□□ -0.25
UBE3A-223	ENST00000631247	GPC2	Q8N158	579 aa		13.51	□□□□□ -0.25

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