RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 CCDC30Q5VVM6 783 aa27.61■■■□□ 2.01
RAB28-208ENST00000630951 NLRP10Q86W26 655 aa27.61■■■□□ 2.01
RAB28-208ENST00000630951 C7orf43Q8WVR3 580 aa27.61■■■□□ 2.01
RAB28-208ENST00000630951 ZC3H4Q9UPT8 1303 aaKnown RBP27.61■■■□□ 2.01
RAB28-208ENST00000630951 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
RAB28-208ENST00000630951 C1QTNF8P60827 252 aa27.6■■■□□ 2.01
RAB28-208ENST00000630951 SLC10A5Q5PT55 438 aa27.6■■■□□ 2.01
RAB28-208ENST00000630951 TSPYL6Q8N831 410 aa27.6■■■□□ 2.01
RAB28-208ENST00000630951 TNRC6CQ9HCJ0 1690 aaKnown RBP27.59■■■□□ 2.01
RAB28-208ENST00000630951 HOXA10P31260 410 aaPredicted RBP27.59■■■□□ 2.01
RAB28-208ENST00000630951 PRELPP51888 382 aa27.59■■■□□ 2.01
RAB28-208ENST00000630951 SALL2Q9Y467 1007 aaPredicted RBP27.59■■■□□ 2.01
RAB28-208ENST00000630951 LTBP3Q9NS15 1303 aa27.58■■■□□ 2.01
RAB28-208ENST00000630951 ANKRD36CQ5JPF3 1778 aa27.58■■■□□ 2.01
RAB28-208ENST00000630951 RPGRQ92834 1020 aaKnown RBP27.57■■■□□ 2
RAB28-208ENST00000630951 NLRP3Q96P20 1036 aa27.57■■■□□ 2
RAB28-208ENST00000630951 TAOK3Q9H2K8 898 aa27.57■■■□□ 2
RAB28-208ENST00000630951 FER1L6Q2WGJ9 1857 aa27.56■■■□□ 2
RAB28-208ENST00000630951 PHAXQ9H814 394 aaKnown RBP27.56■■■□□ 2
RAB28-208ENST00000630951 GOLGA2Q08379 1002 aa27.56■■■□□ 2
RAB28-208ENST00000630951 CCDC93Q567U6 631 aa27.56■■■□□ 2
RAB28-208ENST00000630951 ISCA1Q9BUE6 129 aa27.56■■■□□ 2
RAB28-208ENST00000630951 TRMT112Q9UI30 125 aaKnown RBP27.56■■■□□ 2
RAB28-208ENST00000630951 TWISTNBQ3B726 338 aaPredicted RBP27.55■■■□□ 2
RAB28-208ENST00000630951 CACNA1SQ13698 1873 aa27.55■■■□□ 2
RAB28-208ENST00000630951 SH3TC1Q8TE82 1336 aa27.54■■■□□ 2
RAB28-208ENST00000630951 TRIM28Q13263 835 aaKnown RBP27.54■■■□□ 2
RAB28-208ENST00000630951 RIC3Q7Z5B4 369 aa27.54■■■□□ 2
RAB28-208ENST00000630951 KDM2BQ8NHM5 1336 aa27.53■■■□□ 2
RAB28-208ENST00000630951 FANCIQ9NVI1 1328 aa27.53■■■□□ 2
RAB28-208ENST00000630951 RBM17Q96I25 401 aaKnown RBP27.53■■■□□ 2
RAB28-208ENST00000630951 CRAMP1Q96RY5 1269 aa27.53■■■□□ 2
RAB28-208ENST00000630951 KIF3CO14782 793 aa27.52■■■□□ 2
RAB28-208ENST00000630951 C3orf67Q6ZVT6 689 aa27.52■■■□□ 2
RAB28-208ENST00000630951 RTKN2Q8IZC4 609 aa27.52■■■□□ 2
RAB28-208ENST00000630951 STK31Q9BXU1 1019 aa27.52■■■□□ 2
RAB28-208ENST00000630951 ATP5J2-PTCD1G3V325 749 aa27.51■■□□□ 1.99
RAB28-208ENST00000630951 DDX58O95786 925 aaKnown RBP27.51■■□□□ 1.99
RAB28-208ENST00000630951 CC2D2BQ6DHV5 1058 aa27.5■■□□□ 1.99
RAB28-208ENST00000630951 SYNE4Q8N205 404 aa27.49■■□□□ 1.99
RAB28-208ENST00000630951 CCDC88AQ3V6T2 1871 aa27.49■■□□□ 1.99
RAB28-208ENST00000630951 HCLS1P14317 486 aaPredicted RBP27.49■■□□□ 1.99
RAB28-208ENST00000630951 FKBP4Q02790 459 aaKnown RBP eCLIP27.49■■□□□ 1.99
RAB28-208ENST00000630951 NMRK2Q9NPI5 230 aa27.49■■□□□ 1.99
RAB28-208ENST00000630951 OLFM4Q6UX06 510 aa27.48■■□□□ 1.99
RAB28-208ENST00000630951 GLTPD2A6NH11 291 aa27.47■■□□□ 1.99
RAB28-208ENST00000630951 GRIPAP1Q4V328 841 aa27.47■■□□□ 1.99
RAB28-208ENST00000630951 MYH16Q9H6N6 1097 aa27.47■■□□□ 1.99
RAB28-208ENST00000630951 FAM89AQ96GI7 184 aa27.46■■□□□ 1.99
RAB28-208ENST00000630951 SPINK5Q9NQ38 1064 aaPredicted RBP27.46■■□□□ 1.99
RAB28-208ENST00000630951 METTL22Q9BUU2 404 aaPredicted RBP27.46■■□□□ 1.99
RAB28-208ENST00000630951 CCER2I3L3R5 266 aa27.45■■□□□ 1.98
RAB28-208ENST00000630951 VAMP4O75379 141 aa27.45■■□□□ 1.98
RAB28-208ENST00000630951 SLC4A2P04920 1241 aa27.45■■□□□ 1.98
RAB28-208ENST00000630951 KSR2Q6VAB6 950 aa27.45■■□□□ 1.98
RAB28-208ENST00000630951 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.98
RAB28-208ENST00000630951 ZNF521Q96K83 1311 aa27.45■■□□□ 1.98
RAB28-208ENST00000630951 TCERG1O14776 1098 aaKnown RBP27.44■■□□□ 1.98
RAB28-208ENST00000630951 PPEF1O14829 653 aaPredicted RBP27.44■■□□□ 1.98
RAB28-208ENST00000630951 EXOSC9Q06265 439 aaKnown RBP27.44■■□□□ 1.98
RAB28-208ENST00000630951 DPY19L2Q6NUT2 758 aa27.44■■□□□ 1.98
RAB28-208ENST00000630951 CCDC191Q8NCU4 936 aa27.44■■□□□ 1.98
RAB28-208ENST00000630951 PSMD1Q99460 953 aa27.44■■□□□ 1.98
RAB28-208ENST00000630951 MYD88Q99836 296 aa27.44■■□□□ 1.98
RAB28-208ENST00000630951 SNED1Q8TER0 1413 aa27.44■■□□□ 1.98
RAB28-208ENST00000630951 TIAM2Q8IVF5 1701 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 ZNF428Q96B54 188 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 MAP3K2Q9Y2U5 619 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 ABCC4O15439 1325 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 PI4KAP2A4QPH2 592 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 BBOX1O75936 387 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 TOMM70O94826 608 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 PI4KAP1Q8N8J0 262 aa27.43■■□□□ 1.98
RAB28-208ENST00000630951 ZBTB38Q8NAP3 1195 aaPredicted RBP27.43■■□□□ 1.98
RAB28-208ENST00000630951 DDX46Q7L014 1031 aaKnown RBP27.42■■□□□ 1.98
RAB28-208ENST00000630951 RRAGCQ9HB90 399 aa27.42■■□□□ 1.98
RAB28-208ENST00000630951 ZNF277Q9NRM2 450 aaPredicted RBP27.42■■□□□ 1.98
RAB28-208ENST00000630951 TMX4Q9H1E5 349 aaPredicted RBP27.41■■□□□ 1.98
RAB28-208ENST00000630951 ATP6V0A2Q9Y487 856 aa27.41■■□□□ 1.98
RAB28-208ENST00000630951 HSP90B1P14625 803 aaKnown RBP27.4■■□□□ 1.98
RAB28-208ENST00000630951 SF3B3Q15393 1217 aaKnown RBP27.4■■□□□ 1.98
RAB28-208ENST00000630951 CWC25Q9NXE8 425 aaPredicted RBP27.4■■□□□ 1.98
RAB28-208ENST00000630951 LAMB2P55268 1798 aa27.4■■□□□ 1.98
RAB28-208ENST00000630951 IRS4O14654 1257 aaPredicted RBP27.4■■□□□ 1.98
RAB28-208ENST00000630951 G2E3Q7L622 706 aa27.4■■□□□ 1.98
RAB28-208ENST00000630951 IARSP41252 1262 aaKnown RBP27.39■■□□□ 1.97
RAB28-208ENST00000630951 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.97
RAB28-208ENST00000630951 FLIIQ13045 1269 aa27.38■■□□□ 1.97
RAB28-208ENST00000630951 GRAPQ13588 217 aa27.38■■□□□ 1.97
RAB28-208ENST00000630951 C16orf71Q8IYS4 520 aaPredicted RBP27.38■■□□□ 1.97
RAB28-208ENST00000630951 GRAPLQ8TC17 118 aaPredicted RBP27.38■■□□□ 1.97
RAB28-208ENST00000630951 DDX60Q8IY21 1712 aaKnown RBP27.38■■□□□ 1.97
RAB28-208ENST00000630951 PCCAP05165 728 aaPredicted RBP27.37■■□□□ 1.97
RAB28-208ENST00000630951 VEGFAP15692 232 aaPredicted RBP27.37■■□□□ 1.97
RAB28-208ENST00000630951 NEXNQ0ZGT2 675 aa27.37■■□□□ 1.97
RAB28-208ENST00000630951 SP8Q8IXZ3 490 aa27.36■■□□□ 1.97
RAB28-208ENST00000630951 CACNA1FO60840 1977 aa27.36■■□□□ 1.97
RAB28-208ENST00000630951 TMC4Q7Z404 712 aa27.36■■□□□ 1.97
RAB28-208ENST00000630951 RBM46Q8TBY0 533 aaKnown RBP27.36■■□□□ 1.97
RAB28-208ENST00000630951 IGKV5-2P06315 115 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms