RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	BEND3	Q5T5X7	828 aa		33.02	■■■□□ 2.88
UBE3A-222	ENST00000630907	TRMT112	Q9UI30	125 aa	Known RBP	33.02	■■■□□ 2.88
UBE3A-222	ENST00000630907	CD2AP	Q9Y5K6	639 aa		33.02	■■■□□ 2.88
UBE3A-222	ENST00000630907	AFDN	P55196	1824 aa	Known RBP	33.02	■■■□□ 2.88
UBE3A-222	ENST00000630907	NEURL1B	A8MQ27	555 aa		33.01	■■■□□ 2.87
UBE3A-222	ENST00000630907	ZKSCAN2	Q63HK3	967 aa		33.01	■■■□□ 2.87
UBE3A-222	ENST00000630907	NUTM1	Q86Y26	1132 aa		33.01	■■■□□ 2.87
UBE3A-222	ENST00000630907	CCDC24	Q8N4L8	307 aa		33.01	■■■□□ 2.87
UBE3A-222	ENST00000630907	C10orf71	Q711Q0	1435 aa		33.01	■■■□□ 2.87
UBE3A-222	ENST00000630907	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33	■■■□□ 2.87
UBE3A-222	ENST00000630907	RNF123	Q5XPI4	1314 aa		33	■■■□□ 2.87
UBE3A-222	ENST00000630907	ATF7IP	Q6VMQ6	1270 aa		32.99	■■■□□ 2.87
UBE3A-222	ENST00000630907	ERFE	Q4G0M1	354 aa		32.98	■■■□□ 2.87
UBE3A-222	ENST00000630907	SRCIN1	Q9C0H9	1055 aa		32.98	■■■□□ 2.87
UBE3A-222	ENST00000630907	BRIP1	Q9BX63	1249 aa		32.97	■■■□□ 2.87
UBE3A-222	ENST00000630907	SH3TC1	Q8TE82	1336 aa		32.97	■■■□□ 2.87
UBE3A-222	ENST00000630907	ALDH1L1	O75891	902 aa		32.96	■■■□□ 2.87
UBE3A-222	ENST00000630907	TRIM27	P14373	513 aa		32.96	■■■□□ 2.87
UBE3A-222	ENST00000630907	GCKR	Q14397	625 aa		32.95	■■■□□ 2.87
UBE3A-222	ENST00000630907	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.95	■■■□□ 2.87
UBE3A-222	ENST00000630907	FAM89A	Q96GI7	184 aa		32.95	■■■□□ 2.87
UBE3A-222	ENST00000630907	PXDNL	A1KZ92	1463 aa		32.94	■■■□□ 2.86
UBE3A-222	ENST00000630907	PCCA	P05165	728 aa	Predicted RBP	32.94	■■■□□ 2.86
UBE3A-222	ENST00000630907	ABCC12	Q96J65	1359 aa		32.94	■■■□□ 2.86
UBE3A-222	ENST00000630907	PDE6B	P35913	854 aa		32.93	■■■□□ 2.86
UBE3A-222	ENST00000630907	CCT4	P50991	539 aa	Known RBP	32.93	■■■□□ 2.86
UBE3A-222	ENST00000630907	RTL5	Q5HYW3	569 aa	Predicted RBP	32.93	■■■□□ 2.86
UBE3A-222	ENST00000630907	SLC10A5	Q5PT55	438 aa		32.93	■■■□□ 2.86
UBE3A-222	ENST00000630907	SYNE4	Q8N205	404 aa		32.93	■■■□□ 2.86
UBE3A-222	ENST00000630907	SYT17	Q9BSW7	474 aa		32.93	■■■□□ 2.86
UBE3A-222	ENST00000630907	TGFB2	P61812	414 aa		32.92	■■■□□ 2.86
UBE3A-222	ENST00000630907	TNN	Q9UQP3	1299 aa		32.92	■■■□□ 2.86
UBE3A-222	ENST00000630907	ABCC4	O15439	1325 aa		32.92	■■■□□ 2.86
UBE3A-222	ENST00000630907	JARID2	Q92833	1246 aa	Predicted RBP	32.91	■■■□□ 2.86
UBE3A-222	ENST00000630907	CLUAP1	Q96AJ1	413 aa		32.91	■■■□□ 2.86
UBE3A-222	ENST00000630907		H7C1W4	665 aa		32.9	■■■□□ 2.86
UBE3A-222	ENST00000630907	KIF13B	Q9NQT8	1826 aa		32.9	■■■□□ 2.86
UBE3A-222	ENST00000630907	HCLS1	P14317	486 aa	Predicted RBP	32.89	■■■□□ 2.86
UBE3A-222	ENST00000630907	NLGN2	Q8NFZ4	835 aa		32.89	■■■□□ 2.86
UBE3A-222	ENST00000630907	RIC1	Q4ADV7	1423 aa		32.88	■■■□□ 2.85
UBE3A-222	ENST00000630907	IRS4	O14654	1257 aa	Predicted RBP	32.88	■■■□□ 2.85
UBE3A-222	ENST00000630907	C2CD5	Q86YS7	1000 aa		32.88	■■■□□ 2.85
UBE3A-222	ENST00000630907	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.88	■■■□□ 2.85
UBE3A-222	ENST00000630907	PDZRN3	Q9UPQ7	1066 aa		32.88	■■■□□ 2.85
UBE3A-222	ENST00000630907	HSP90B1	P14625	803 aa	Known RBP	32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	INTS3	Q68E01	1043 aa	Known RBP	32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	UBE3B	Q7Z3V4	1068 aa		32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	FTSJ3	Q8IY81	847 aa	Known RBP	32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	DZIP1L	Q8IYY4	767 aa	Known RBP	32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	NLRP3	Q96P20	1036 aa		32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.87	■■■□□ 2.85
UBE3A-222	ENST00000630907	CDHR2	Q9BYE9	1310 aa		32.86	■■■□□ 2.85
UBE3A-222	ENST00000630907		A0A0G2JLW4	131 aa		32.86	■■■□□ 2.85
UBE3A-222	ENST00000630907		H0YIN7	160 aa		32.86	■■■□□ 2.85
UBE3A-222	ENST00000630907	GRM8	O00222	908 aa		32.86	■■■□□ 2.85
UBE3A-222	ENST00000630907	PLIN1	O60240	522 aa		32.86	■■■□□ 2.85
UBE3A-222	ENST00000630907	DPEP1	P16444	411 aa		32.86	■■■□□ 2.85
UBE3A-222	ENST00000630907	ANKRD31	Q8N7Z5	1873 aa		32.85	■■■□□ 2.85
UBE3A-222	ENST00000630907	KLRG2	A4D1S0	409 aa	Predicted RBP	32.85	■■■□□ 2.85
UBE3A-222	ENST00000630907	MS4A1	P11836	297 aa		32.85	■■■□□ 2.85
UBE3A-222	ENST00000630907	CHRNA5	P30532	468 aa		32.85	■■■□□ 2.85
UBE3A-222	ENST00000630907	CASP7	P55210	303 aa		32.83	■■■□□ 2.85
UBE3A-222	ENST00000630907	TMEM57	Q8N5G2	664 aa		32.83	■■■□□ 2.85
UBE3A-222	ENST00000630907	C3orf67	Q6ZVT6	689 aa		32.82	■■■□□ 2.84
UBE3A-222	ENST00000630907	PDE8A	O60658	829 aa		32.81	■■■□□ 2.84
UBE3A-222	ENST00000630907	SRGN	P10124	158 aa		32.8	■■■□□ 2.84
UBE3A-222	ENST00000630907	RLBP1	P12271	317 aa		32.8	■■■□□ 2.84
UBE3A-222	ENST00000630907	CRY2	Q49AN0	593 aa		32.8	■■■□□ 2.84
UBE3A-222	ENST00000630907	USP44	Q9H0E7	712 aa		32.8	■■■□□ 2.84
UBE3A-222	ENST00000630907	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.8	■■■□□ 2.84
UBE3A-222	ENST00000630907	UTY	O14607	1347 aa		32.79	■■■□□ 2.84
UBE3A-222	ENST00000630907	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.79	■■■□□ 2.84
UBE3A-222	ENST00000630907	KCNA3	P22001	575 aa		32.79	■■■□□ 2.84
UBE3A-222	ENST00000630907	PANK1	Q8TE04	598 aa		32.79	■■■□□ 2.84
UBE3A-222	ENST00000630907	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
UBE3A-222	ENST00000630907	MASTL	Q96GX5	879 aa		32.79	■■■□□ 2.84
UBE3A-222	ENST00000630907	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.78	■■■□□ 2.84
UBE3A-222	ENST00000630907	KIAA1551	Q9HCM1	1747 aa		32.78	■■■□□ 2.84
UBE3A-222	ENST00000630907	NPR1	P16066	1061 aa		32.78	■■■□□ 2.84
UBE3A-222	ENST00000630907	SRCAP	Q6ZRS2	3230 aa		32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	SF3B3	Q15393	1217 aa	Known RBP	32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	STYK1	Q6J9G0	422 aa		32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	RPGR	Q92834	1020 aa	Known RBP	32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	PLA2G12B	Q9BX93	195 aa		32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	PIM2	Q9P1W9	311 aa		32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	DDX60	Q8IY21	1712 aa	Known RBP	32.77	■■■□□ 2.84
UBE3A-222	ENST00000630907	RRP1	P56182	461 aa	Known RBP	32.76	■■■□□ 2.83
UBE3A-222	ENST00000630907	PDE3A	Q14432	1141 aa		32.75	■■■□□ 2.83
UBE3A-222	ENST00000630907	ITPRIP	Q8IWB1	547 aa		32.75	■■■□□ 2.83
UBE3A-222	ENST00000630907	LAMB2	P55268	1798 aa		32.74	■■■□□ 2.83
UBE3A-222	ENST00000630907	HOXA10	P31260	410 aa	Predicted RBP	32.74	■■■□□ 2.83
UBE3A-222	ENST00000630907	RBM17	Q96I25	401 aa	Known RBP	32.74	■■■□□ 2.83
UBE3A-222	ENST00000630907	COL11A2	P13942	1736 aa	Predicted RBP	32.74	■■■□□ 2.83
UBE3A-222	ENST00000630907	CTSW	P56202	376 aa		32.73	■■■□□ 2.83
UBE3A-222	ENST00000630907	CNKSR1	Q969H4	720 aa		32.73	■■■□□ 2.83
UBE3A-222	ENST00000630907	SUCLG2	Q96I99	432 aa		32.73	■■■□□ 2.83
UBE3A-222	ENST00000630907	UBTFL1	P0CB47	393 aa	Predicted RBP	32.72	■■■□□ 2.83
UBE3A-222	ENST00000630907	CCDC152	Q4G0S7	254 aa		32.72	■■■□□ 2.83
UBE3A-222	ENST00000630907	MEIS3	Q99687	375 aa		32.72	■■■□□ 2.83
UBE3A-222	ENST00000630907	WWC3	Q9ULE0	1092 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms