RNA–Protein interactions for RNA: ENST00000630848.2

CEACAM3-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CEACAM3, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-208ENST00000630848 LMOD3Q0VAK6 560 aa23.33■■□□□ 1.33
CEACAM3-208ENST00000630848 COPS6Q7L5N1 327 aa23.33■■□□□ 1.33
CEACAM3-208ENST00000630848 ZNF277Q9NRM2 450 aaPredicted RBP23.33■■□□□ 1.33
CEACAM3-208ENST00000630848 CHPF2Q9P2E5 772 aa23.33■■□□□ 1.33
CEACAM3-208ENST00000630848 ZNF541Q9H0D2 1346 aa23.33■■□□□ 1.32
CEACAM3-208ENST00000630848 ADAMTSL1Q8N6G6 1762 aa23.32■■□□□ 1.32
CEACAM3-208ENST00000630848 SCN4AP35499 1836 aa23.32■■□□□ 1.32
CEACAM3-208ENST00000630848 APAF1O14727 1248 aa23.32■■□□□ 1.32
CEACAM3-208ENST00000630848 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
CEACAM3-208ENST00000630848 MBIPQ9NS73 344 aa23.32■■□□□ 1.32
CEACAM3-208ENST00000630848 AIMP1Q12904 312 aaKnown RBP23.31■■□□□ 1.32
CEACAM3-208ENST00000630848 CCDC93Q567U6 631 aa23.31■■□□□ 1.32
CEACAM3-208ENST00000630848 HOXA10P31260 410 aaPredicted RBP23.29■■□□□ 1.32
CEACAM3-208ENST00000630848 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.32
CEACAM3-208ENST00000630848 DDX21Q9NR30 783 aaKnown RBP eCLIP23.29■■□□□ 1.32
CEACAM3-208ENST00000630848 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
CEACAM3-208ENST00000630848 NLRP10Q86W26 655 aa23.28■■□□□ 1.32
CEACAM3-208ENST00000630848 NYXQ9GZU5 481 aa23.28■■□□□ 1.32
CEACAM3-208ENST00000630848 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
CEACAM3-208ENST00000630848 VEGFAP15692 232 aaPredicted RBP23.27■■□□□ 1.32
CEACAM3-208ENST00000630848 APLP1P51693 650 aa23.27■■□□□ 1.32
CEACAM3-208ENST00000630848 CFAP44Q96MT7 982 aa23.27■■□□□ 1.32
CEACAM3-208ENST00000630848 GTF2E1P29083 439 aaPredicted RBP23.26■■□□□ 1.31
CEACAM3-208ENST00000630848 FSTL1Q12841 308 aa23.26■■□□□ 1.31
CEACAM3-208ENST00000630848 DUSP27Q5VZP5 1158 aa23.25■■□□□ 1.31
CEACAM3-208ENST00000630848 HCLS1P14317 486 aaPredicted RBP23.24■■□□□ 1.31
CEACAM3-208ENST00000630848 SLC10A5Q5PT55 438 aa23.24■■□□□ 1.31
CEACAM3-208ENST00000630848 HDGFL1Q5TGJ6 251 aa23.24■■□□□ 1.31
CEACAM3-208ENST00000630848 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
CEACAM3-208ENST00000630848 ABCC4O15439 1325 aa23.24■■□□□ 1.31
CEACAM3-208ENST00000630848 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
CEACAM3-208ENST00000630848 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
CEACAM3-208ENST00000630848 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
CEACAM3-208ENST00000630848 C8orf58Q8NAV2 365 aa23.23■■□□□ 1.31
CEACAM3-208ENST00000630848 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
CEACAM3-208ENST00000630848 IARSP41252 1262 aaKnown RBP23.22■■□□□ 1.31
CEACAM3-208ENST00000630848 PARP10Q53GL7 1025 aa23.22■■□□□ 1.31
CEACAM3-208ENST00000630848 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
CEACAM3-208ENST00000630848 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
CEACAM3-208ENST00000630848 TSPYL6Q8N831 410 aa23.21■■□□□ 1.31
CEACAM3-208ENST00000630848 SMC1BQ8NDV3 1235 aa23.21■■□□□ 1.31
CEACAM3-208ENST00000630848 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
CEACAM3-208ENST00000630848 ISCA1Q9BUE6 129 aa23.21■■□□□ 1.31
CEACAM3-208ENST00000630848 PHAXQ9H814 394 aaKnown RBP23.21■■□□□ 1.31
CEACAM3-208ENST00000630848 FZD9O00144 591 aa23.2■■□□□ 1.3
CEACAM3-208ENST00000630848 HOXB7P09629 217 aa23.2■■□□□ 1.3
CEACAM3-208ENST00000630848 RPGRQ92834 1020 aaKnown RBP23.2■■□□□ 1.3
CEACAM3-208ENST00000630848 L3MBTL3Q96JM7 780 aaPredicted RBP23.2■■□□□ 1.3
CEACAM3-208ENST00000630848 PSMD1Q99460 953 aa23.2■■□□□ 1.3
CEACAM3-208ENST00000630848 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
CEACAM3-208ENST00000630848 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
CEACAM3-208ENST00000630848 PPP1R42Q7Z4L9 355 aa23.19■■□□□ 1.3
CEACAM3-208ENST00000630848 RTKN2Q8IZC4 609 aa23.19■■□□□ 1.3
CEACAM3-208ENST00000630848 IFT57Q9NWB7 429 aa23.19■■□□□ 1.3
CEACAM3-208ENST00000630848 DPY19L2Q6NUT2 758 aa23.18■■□□□ 1.3
CEACAM3-208ENST00000630848 PLBD2Q8NHP8 589 aa23.18■■□□□ 1.3
CEACAM3-208ENST00000630848 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
CEACAM3-208ENST00000630848 TAF1DQ9H5J8 278 aaPredicted RBP23.17■■□□□ 1.3
CEACAM3-208ENST00000630848 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
CEACAM3-208ENST00000630848 RBM17Q96I25 401 aaKnown RBP23.16■■□□□ 1.3
CEACAM3-208ENST00000630848 DBF4Q9UBU7 674 aaPredicted RBP23.16■■□□□ 1.3
CEACAM3-208ENST00000630848 SPEF2Q9C093 1822 aa23.16■■□□□ 1.3
CEACAM3-208ENST00000630848 ANKRD13DQ6ZTN6 518 aa23.15■■□□□ 1.3
CEACAM3-208ENST00000630848 KLRG1Q96E93 195 aa23.15■■□□□ 1.3
CEACAM3-208ENST00000630848 FAM89AQ96GI7 184 aa23.15■■□□□ 1.3
CEACAM3-208ENST00000630848 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
CEACAM3-208ENST00000630848 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
CEACAM3-208ENST00000630848 SCN9AQ15858 1988 aa23.14■■□□□ 1.3
CEACAM3-208ENST00000630848 RTL5Q5HYW3 569 aaPredicted RBP23.14■■□□□ 1.29
CEACAM3-208ENST00000630848 ATP6V0A2Q9Y487 856 aa23.14■■□□□ 1.29
CEACAM3-208ENST00000630848 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
CEACAM3-208ENST00000630848 GNAI1P63096 354 aa23.13■■□□□ 1.29
CEACAM3-208ENST00000630848 HSP90AB3PQ58FF7 597 aa23.13■■□□□ 1.29
CEACAM3-208ENST00000630848 MYH3P11055 1940 aa23.13■■□□□ 1.29
CEACAM3-208ENST00000630848 AOC3Q16853 763 aa23.12■■□□□ 1.29
CEACAM3-208ENST00000630848 JMYQ8N9B5 988 aa23.12■■□□□ 1.29
CEACAM3-208ENST00000630848 CHADLQ6NUI6 762 aa23.11■■□□□ 1.29
CEACAM3-208ENST00000630848 JARID2Q92833 1246 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-208ENST00000630848 CELF1Q92879 486 aaKnown RBP23.11■■□□□ 1.29
CEACAM3-208ENST00000630848 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
CEACAM3-208ENST00000630848 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
CEACAM3-208ENST00000630848 ZNF316A6NFI3 1004 aaPredicted RBP23.1■■□□□ 1.29
CEACAM3-208ENST00000630848 SCNN1DP51172 638 aa23.1■■□□□ 1.29
CEACAM3-208ENST00000630848 CC2D2BQ6DHV5 1058 aa23.1■■□□□ 1.29
CEACAM3-208ENST00000630848 WWC1Q8IX03 1113 aa23.1■■□□□ 1.29
CEACAM3-208ENST00000630848 RTFDC1Q9BY42 306 aaPredicted RBP23.1■■□□□ 1.29
CEACAM3-208ENST00000630848 ITGBL1O95965 494 aaPredicted RBP23.09■■□□□ 1.29
CEACAM3-208ENST00000630848 ZNF646O15015 1829 aaPredicted RBP23.08■■□□□ 1.29
CEACAM3-208ENST00000630848 FMR1Q06787 632 aaKnown RBP eCLIP23.08■■□□□ 1.29
CEACAM3-208ENST00000630848 GRAPQ13588 217 aa23.08■■□□□ 1.29
CEACAM3-208ENST00000630848 G2E3Q7L622 706 aa23.08■■□□□ 1.29
CEACAM3-208ENST00000630848 GRAPLQ8TC17 118 aaPredicted RBP23.08■■□□□ 1.29
CEACAM3-208ENST00000630848 CACNA1FO60840 1977 aa23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 EPHX2P34913 555 aa23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 EPS15P42566 896 aa23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 GPC2Q8N158 579 aa23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 LARGE2Q8N3Y3 721 aa23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 TRPM7Q96QT4 1865 aa23.07■■□□□ 1.28
CEACAM3-208ENST00000630848 PPIP5K2O43314 1243 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms