RNA–Protein interactions for RNA: ENST00000630720.3

TCF4-273, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-273ENST00000630720 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
TCF4-273ENST00000630720 HMGB2P26583 209 aaKnown RBP11.05□□□□□ -0.64
TCF4-273ENST00000630720 DEKP35659 375 aaKnown RBP11.05□□□□□ -0.64
TCF4-273ENST00000630720 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
TCF4-273ENST00000630720 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
TCF4-273ENST00000630720 TTLL7Q6ZT98 887 aa11.05□□□□□ -0.64
TCF4-273ENST00000630720 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
TCF4-273ENST00000630720 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
TCF4-273ENST00000630720 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
TCF4-273ENST00000630720 TRIM27P14373 513 aa11.04□□□□□ -0.64
TCF4-273ENST00000630720 G2E3Q7L622 706 aa11.04□□□□□ -0.64
TCF4-273ENST00000630720 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
TCF4-273ENST00000630720 API5Q9BZZ5 524 aaKnown RBP11.04□□□□□ -0.64
TCF4-273ENST00000630720 DBF4Q9UBU7 674 aaPredicted RBP11.04□□□□□ -0.64
TCF4-273ENST00000630720 DAXXQ9UER7 740 aaPredicted RBP11.04□□□□□ -0.64
TCF4-273ENST00000630720 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
TCF4-273ENST00000630720 DDX19BQ9UMR2 479 aa11.04□□□□□ -0.64
TCF4-273ENST00000630720 PDZRN3Q9UPQ7 1066 aa11.04□□□□□ -0.64
TCF4-273ENST00000630720 FKBP5Q13451 457 aaPredicted RBP11.03□□□□□ -0.64
TCF4-273ENST00000630720 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
TCF4-273ENST00000630720 ARHGAP45Q92619 1136 aa11.03□□□□□ -0.64
TCF4-273ENST00000630720 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
TCF4-273ENST00000630720 ZPR1O75312 459 aa11.03□□□□□ -0.64
TCF4-273ENST00000630720 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
TCF4-273ENST00000630720 FLIIQ13045 1269 aa11.03□□□□□ -0.64
TCF4-273ENST00000630720 PTPRCP08575 1304 aa11.02□□□□□ -0.64
TCF4-273ENST00000630720 COL24A1Q17RW2 1714 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
TCF4-273ENST00000630720 HLFQ16534 295 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 BICDL1Q6ZP65 573 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
TCF4-273ENST00000630720 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
TCF4-273ENST00000630720 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
TCF4-273ENST00000630720 LRP5O75197 1615 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 MMP10P09238 476 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 DDR1Q08345 913 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 TBC1D9BQ66K14 1250 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 TMEM57Q8N5G2 664 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
TCF4-273ENST00000630720 A0A087WZG4 1122 aa11□□□□□ -0.65
TCF4-273ENST00000630720 F6X3S4 739 aa11□□□□□ -0.65
TCF4-273ENST00000630720 NFIXQ14938 502 aa11□□□□□ -0.65
TCF4-273ENST00000630720 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
TCF4-273ENST00000630720 PPP1R1BQ9UD71 204 aaPredicted RBP11□□□□□ -0.65
TCF4-273ENST00000630720 SCN7AQ01118 1682 aa11□□□□□ -0.65
TCF4-273ENST00000630720 ERBB4Q15303 1308 aa11□□□□□ -0.65
TCF4-273ENST00000630720 UTRNP46939 3433 aa11□□□□□ -0.65
TCF4-273ENST00000630720 BCORQ6W2J9 1755 aa11□□□□□ -0.65
TCF4-273ENST00000630720 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
TCF4-273ENST00000630720 POLD1P28340 1107 aa10.99□□□□□ -0.65
TCF4-273ENST00000630720 TM4SF1P30408 202 aa10.99□□□□□ -0.65
TCF4-273ENST00000630720 NUBP1P53384 320 aa10.99□□□□□ -0.65
TCF4-273ENST00000630720 CHMP4BQ9H444 224 aaKnown RBP10.99□□□□□ -0.65
TCF4-273ENST00000630720 HAX1O00165 279 aa10.99□□□□□ -0.65
TCF4-273ENST00000630720 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
TCF4-273ENST00000630720 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
TCF4-273ENST00000630720 CCDC24Q8N4L8 307 aa10.99□□□□□ -0.65
TCF4-273ENST00000630720 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
TCF4-273ENST00000630720 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 CACNA1FO60840 1977 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 NUP98P52948 1817 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 GPTP24298 496 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 KIF6Q6ZMV9 814 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 SMC5Q8IY18 1101 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 ZBTB40Q9NUA8 1239 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 ABCC4O15439 1325 aa10.98□□□□□ -0.65
TCF4-273ENST00000630720 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
TCF4-273ENST00000630720 GSE1Q14687 1217 aa10.97□□□□□ -0.65
TCF4-273ENST00000630720 NLGN2Q8NFZ4 835 aa10.97□□□□□ -0.65
TCF4-273ENST00000630720 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
TCF4-273ENST00000630720 MAP3K2Q9Y2U5 619 aa10.97□□□□□ -0.65
TCF4-273ENST00000630720 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
TCF4-273ENST00000630720 AFDNP55196 1824 aaKnown RBP10.97□□□□□ -0.65
TCF4-273ENST00000630720 SEC24BO95487 1268 aa10.96□□□□□ -0.65
TCF4-273ENST00000630720 CCT4P50991 539 aaKnown RBP10.96□□□□□ -0.65
TCF4-273ENST00000630720 KSR2Q6VAB6 950 aa10.96□□□□□ -0.65
TCF4-273ENST00000630720 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
TCF4-273ENST00000630720 SYT17Q9BSW7 474 aa10.96□□□□□ -0.65
TCF4-273ENST00000630720 UPF2Q9HAU5 1272 aaKnown RBP10.96□□□□□ -0.65
TCF4-273ENST00000630720 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
TCF4-273ENST00000630720 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.65
TCF4-273ENST00000630720 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 SERPINB2P05120 415 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 BECN1Q14457 450 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 INTS3Q68E01 1043 aaKnown RBP10.95□□□□□ -0.66
TCF4-273ENST00000630720 GIGYF2Q6Y7W6 1299 aaKnown RBP10.95□□□□□ -0.66
TCF4-273ENST00000630720 SETDB2Q96T68 719 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 WWC3Q9ULE0 1092 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 UBN2Q6ZU65 1347 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 CARMIL3Q8ND23 1372 aa10.95□□□□□ -0.66
TCF4-273ENST00000630720 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
TCF4-273ENST00000630720 NEXNQ0ZGT2 675 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms