RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 PPP1R42Q7Z4L9 355 aa21.1■□□□□ 0.97
CDC42EP4-209ENST00000630622 CWC25Q9NXE8 425 aaPredicted RBP21.1■□□□□ 0.97
CDC42EP4-209ENST00000630622 PLIN1O60240 522 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 ALDH1L1O75891 902 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 PRR5LQ6MZQ0 368 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 CNBD1Q8NA66 436 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 UTP14AQ9BVJ6 771 aaKnown RBP21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 SRCIN1Q9C0H9 1055 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 NYXQ9GZU5 481 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 C10orf71Q711Q0 1435 aa21.09■□□□□ 0.97
CDC42EP4-209ENST00000630622 GCKRQ14397 625 aa21.08■□□□□ 0.97
CDC42EP4-209ENST00000630622 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.97
CDC42EP4-209ENST00000630622 TPTE2Q6XPS3 522 aa21.08■□□□□ 0.97
CDC42EP4-209ENST00000630622 CLUAP1Q96AJ1 413 aa21.08■□□□□ 0.97
CDC42EP4-209ENST00000630622 LAMB2P55268 1798 aa21.08■□□□□ 0.96
CDC42EP4-209ENST00000630622 RNF123Q5XPI4 1314 aa21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 RLBP1P12271 317 aa21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 NUTM1Q86Y26 1132 aa21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 SYNE4Q8N205 404 aa21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 TRMT112Q9UI30 125 aaKnown RBP21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 ABCC12Q96J65 1359 aa21.07■□□□□ 0.96
CDC42EP4-209ENST00000630622 TNRC6CQ9HCJ0 1690 aaKnown RBP21.06■□□□□ 0.96
CDC42EP4-209ENST00000630622 ERFEQ4G0M1 354 aa21.06■□□□□ 0.96
CDC42EP4-209ENST00000630622 DZIP1LQ8IYY4 767 aaKnown RBP21.06■□□□□ 0.96
CDC42EP4-209ENST00000630622 CCDC24Q8N4L8 307 aa21.06■□□□□ 0.96
CDC42EP4-209ENST00000630622 ZBTB38Q8NAP3 1195 aaPredicted RBP21.06■□□□□ 0.96
CDC42EP4-209ENST00000630622 RIC1Q4ADV7 1423 aa21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 KIAA1551Q9HCM1 1747 aa21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 PCCAP05165 728 aaPredicted RBP21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 RRP1P56182 461 aaKnown RBP21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 TMEM57Q8N5G2 664 aa21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 FAM89AQ96GI7 184 aa21.05■□□□□ 0.96
CDC42EP4-209ENST00000630622 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
CDC42EP4-209ENST00000630622 H7C1W4 665 aa21.04■□□□□ 0.96
CDC42EP4-209ENST00000630622 CASP7P55210 303 aa21.04■□□□□ 0.96
CDC42EP4-209ENST00000630622 ST5P78524 1137 aa21.04■□□□□ 0.96
CDC42EP4-209ENST00000630622 SLC10A5Q5PT55 438 aa21.04■□□□□ 0.96
CDC42EP4-209ENST00000630622 PANK1Q8TE04 598 aa21.04■□□□□ 0.96
CDC42EP4-209ENST00000630622 NPHP1O15259 732 aa21.03■□□□□ 0.96
CDC42EP4-209ENST00000630622 GTF2E1P29083 439 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP4-209ENST00000630622 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
CDC42EP4-209ENST00000630622 JARID2Q92833 1246 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP4-209ENST00000630622 UTYO14607 1347 aa21.03■□□□□ 0.96
CDC42EP4-209ENST00000630622 CDHR2Q9BYE9 1310 aa21.03■□□□□ 0.96
CDC42EP4-209ENST00000630622 COL11A2P13942 1736 aaPredicted RBP21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 GRM8O00222 908 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 MS4A1P11836 297 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 C20orf194Q5TEA3 1177 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 UBE3BQ7Z3V4 1068 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 BRIP1Q9BX63 1249 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 USP44Q9H0E7 712 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
CDC42EP4-209ENST00000630622 PDE3AQ14432 1141 aa21.01■□□□□ 0.95
CDC42EP4-209ENST00000630622 MYH3P11055 1940 aa21.01■□□□□ 0.95
CDC42EP4-209ENST00000630622 IRS4O14654 1257 aaPredicted RBP21■□□□□ 0.95
CDC42EP4-209ENST00000630622 HCLS1P14317 486 aaPredicted RBP21■□□□□ 0.95
CDC42EP4-209ENST00000630622 FHDC1Q9C0D6 1143 aaPredicted RBP21■□□□□ 0.95
CDC42EP4-209ENST00000630622 C9orf78Q9NZ63 289 aaPredicted RBP21■□□□□ 0.95
CDC42EP4-209ENST00000630622 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
CDC42EP4-209ENST00000630622 SUPT16HQ9Y5B9 1047 aaKnown RBP21■□□□□ 0.95
CDC42EP4-209ENST00000630622 SRCAPQ6ZRS2 3230 aa21■□□□□ 0.95
CDC42EP4-209ENST00000630622 DLEC1Q9Y238 1755 aa21■□□□□ 0.95
CDC42EP4-209ENST00000630622 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
CDC42EP4-209ENST00000630622 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
CDC42EP4-209ENST00000630622 C3orf67Q6ZVT6 689 aa20.99■□□□□ 0.95
CDC42EP4-209ENST00000630622 MEIS3Q99687 375 aa20.98■□□□□ 0.95
CDC42EP4-209ENST00000630622 PDE6BP35913 854 aa20.97■□□□□ 0.95
CDC42EP4-209ENST00000630622 ITPRIPQ8IWB1 547 aa20.97■□□□□ 0.95
CDC42EP4-209ENST00000630622 KLHL34Q8N239 644 aa20.97■□□□□ 0.95
CDC42EP4-209ENST00000630622 PLA2G12BQ9BX93 195 aa20.97■□□□□ 0.95
CDC42EP4-209ENST00000630622 BRCA1P38398 1863 aaKnown RBP20.96■□□□□ 0.95
CDC42EP4-209ENST00000630622 PDE8AO60658 829 aa20.96■□□□□ 0.95
CDC42EP4-209ENST00000630622 MVPQ14764 893 aaKnown RBP20.96■□□□□ 0.95
CDC42EP4-209ENST00000630622 CRY2Q49AN0 593 aa20.96■□□□□ 0.95
CDC42EP4-209ENST00000630622 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
CDC42EP4-209ENST00000630622 CENPBP07199 599 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 CHRNA5P30532 468 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 TGFB2P61812 414 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 KAZALD1Q96I82 304 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 SUCLG2Q96I99 432 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 NLRP3Q96P20 1036 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 SYT17Q9BSW7 474 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 PDZRN3Q9UPQ7 1066 aa20.95■□□□□ 0.94
CDC42EP4-209ENST00000630622 ZBTB7BO15156 539 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP4-209ENST00000630622 KCNA3P22001 575 aa20.94■□□□□ 0.94
CDC42EP4-209ENST00000630622 FOXO4P98177 505 aa20.94■□□□□ 0.94
CDC42EP4-209ENST00000630622 EPHA10Q5JZY3 1008 aa20.94■□□□□ 0.94
CDC42EP4-209ENST00000630622 C2CD5Q86YS7 1000 aa20.94■□□□□ 0.94
CDC42EP4-209ENST00000630622 GNAI3P08754 354 aa20.93■□□□□ 0.94
CDC42EP4-209ENST00000630622 UBTFL1P0CB47 393 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-209ENST00000630622 SRGNP10124 158 aa20.93■□□□□ 0.94
CDC42EP4-209ENST00000630622 DPEP1P16444 411 aa20.93■□□□□ 0.94
CDC42EP4-209ENST00000630622 CTSWP56202 376 aa20.93■□□□□ 0.94
CDC42EP4-209ENST00000630622 SF3B3Q15393 1217 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms