RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PLA2G12BQ9BX93 195 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 SLKQ9H2G2 1235 aaPredicted RBP6.77□□□□□ -1.33
NEK3-211ENST00000629912 SNRKQ9NRH2 765 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 FBXO3Q9UK99 471 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 SPATA31A5Q5VU36 1347 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 SPATA31A7Q8IWB4 1347 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 ERVV-1B6SEH8 477 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 ST18O60284 1047 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 FRAT2O75474 233 aaPredicted RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 CD2BP2O95400 341 aaKnown RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 PCCAP05165 728 aaPredicted RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 CSF1RP07333 972 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 ATP5JP18859 108 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 HSPA4P34932 840 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 IL6STP40189 918 aaPredicted RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 DDB1Q16531 1140 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 HSP90AB3PQ58FF7 597 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 LMBR1LQ6UX01 489 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 GIGYF2Q6Y7W6 1299 aaKnown RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 KIF6Q6ZMV9 814 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 KCNB2Q92953 911 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 SLC4A9Q96Q91 983 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
NEK3-211ENST00000629912 SLIT2O94813 1529 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 MAP3K15Q6ZN16 1313 aa6.76□□□□□ -1.33
NEK3-211ENST00000629912 CIAO1O76071 339 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 ADAMTS2O95450 1211 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 IL15P40933 162 aaPredicted RBP6.75□□□□□ -1.33
NEK3-211ENST00000629912 TNNI3KQ59H18 835 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 ATG9AQ7Z3C6 839 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 ZBTB38Q8NAP3 1195 aaPredicted RBP6.75□□□□□ -1.33
NEK3-211ENST00000629912 KLHDC4Q8TBB5 520 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 JARID2Q92833 1246 aaPredicted RBP6.75□□□□□ -1.33
NEK3-211ENST00000629912 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
NEK3-211ENST00000629912 CCDC8Q9H0W5 538 aaPredicted RBP6.75□□□□□ -1.33
NEK3-211ENST00000629912 ZBTB3Q9H5J0 574 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
NEK3-211ENST00000629912 FPGT-TNNI3KV9GXZ4 949 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 TJP1Q07157 1748 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 CDHR2Q9BYE9 1310 aa6.75□□□□□ -1.33
NEK3-211ENST00000629912 NUP98P52948 1817 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 EYA2O00167 538 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 MAP4K4O95819 1239 aaPredicted RBP6.74□□□□□ -1.33
NEK3-211ENST00000629912 MCM4P33991 863 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 TFCP2Q12800 502 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 RAB3GAP1Q15042 981 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 CLEC17AQ6ZS10 378 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 MARCH10Q8NA82 808 aaPredicted RBP6.74□□□□□ -1.33
NEK3-211ENST00000629912 SPRYD3Q8NCJ5 442 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 SMARCC1Q92922 1105 aaPredicted RBP6.74□□□□□ -1.33
NEK3-211ENST00000629912 SIL1Q9H173 461 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 RAD50Q92878 1312 aa6.74□□□□□ -1.33
NEK3-211ENST00000629912 CICQ96RK0 1608 aaPredicted RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 DEKP35659 375 aaKnown RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 NEK4P51957 841 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 EIF5P55010 431 aaKnown RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 NUCB2P80303 420 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 CUL4AQ13619 759 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 VPS72Q15906 364 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 INTS5Q6P9B9 1019 aaKnown RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 CWC27Q6UX04 472 aaKnown RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 NLRP10Q86W26 655 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 ZNF34Q8IZ26 560 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 FNBP4Q8N3X1 1017 aaPredicted RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.73□□□□□ -1.33
NEK3-211ENST00000629912 MAP4K1Q92918 833 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 AK7Q96M32 723 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 HAUS7Q99871 368 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 TM6SF1Q9BZW5 370 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 IL25Q9H293 177 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 BOLA2Q9H3K6 86 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 DIAPH3Q9NSV4 1193 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 DBNLQ9UJU6 430 aaKnown RBP6.73□□□□□ -1.33
NEK3-211ENST00000629912 PALD1Q9ULE6 856 aa6.73□□□□□ -1.33
NEK3-211ENST00000629912 ANKRD36CQ5JPF3 1778 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 RFX7Q2KHR2 1363 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 JCADQ9P266 1359 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 ZNF831Q5JPB2 1677 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 RREB1Q92766 1687 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 NUTM2BA6NNL0 878 aaPredicted RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 NUTM2EB1AL46 878 aaPredicted RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 UBAP1LF5GYI3 381 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 RGL2O15211 777 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 HSP90AA1P07900 732 aaKnown RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 PTMSP20962 102 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 PIP4K2BP78356 416 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 GSE1Q14687 1217 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 NECTIN1Q15223 517 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 HLFQ16534 295 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 CCDC57Q2TAC2 916 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 NUTM2AQ8IVF1 878 aaPredicted RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 INTS4Q96HW7 963 aaKnown RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 TLR7Q9NYK1 1049 aaKnown RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 CEP126Q9P2H0 1117 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms