RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 POTECB2RU33 542 aa21.4■■□□□ 1.02
LINC00628-201ENST00000628516 APAF1O14727 1248 aa21.4■■□□□ 1.02
LINC00628-201ENST00000628516 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
LINC00628-201ENST00000628516 UTP14AQ9BVJ6 771 aaKnown RBP21.4■■□□□ 1.02
LINC00628-201ENST00000628516 DDX21Q9NR30 783 aaKnown RBP eCLIP21.4■■□□□ 1.02
LINC00628-201ENST00000628516 ZNF277Q9NRM2 450 aaPredicted RBP21.4■■□□□ 1.02
LINC00628-201ENST00000628516 RIC1Q4ADV7 1423 aa21.39■■□□□ 1.02
LINC00628-201ENST00000628516 HSP90AB3PQ58FF7 597 aa21.39■■□□□ 1.01
LINC00628-201ENST00000628516 HDGFL1Q5TGJ6 251 aa21.39■■□□□ 1.01
LINC00628-201ENST00000628516 CHPF2Q9P2E5 772 aa21.39■■□□□ 1.01
LINC00628-201ENST00000628516 DDNO94850 711 aaPredicted RBP21.38■■□□□ 1.01
LINC00628-201ENST00000628516 RBM17Q96I25 401 aaKnown RBP21.38■■□□□ 1.01
LINC00628-201ENST00000628516 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
LINC00628-201ENST00000628516 HOXB7P09629 217 aa21.37■■□□□ 1.01
LINC00628-201ENST00000628516 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
LINC00628-201ENST00000628516 SYNE4Q8N205 404 aa21.37■■□□□ 1.01
LINC00628-201ENST00000628516 NLRP3Q96P20 1036 aa21.37■■□□□ 1.01
LINC00628-201ENST00000628516 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
LINC00628-201ENST00000628516 HTRA3P83110 453 aa21.36■■□□□ 1.01
LINC00628-201ENST00000628516 C3orf67Q6ZVT6 689 aa21.36■■□□□ 1.01
LINC00628-201ENST00000628516 TCIRG1Q13488 830 aa21.35■■□□□ 1.01
LINC00628-201ENST00000628516 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
LINC00628-201ENST00000628516 CC2D2BQ6DHV5 1058 aa21.35■■□□□ 1.01
LINC00628-201ENST00000628516 NLRP10Q86W26 655 aa21.35■■□□□ 1.01
LINC00628-201ENST00000628516 DNAJC5GQ8N7S2 189 aa21.35■■□□□ 1.01
LINC00628-201ENST00000628516 CRAMP1Q96RY5 1269 aa21.35■■□□□ 1.01
LINC00628-201ENST00000628516 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
LINC00628-201ENST00000628516 ANP32CO43423 234 aa21.34■■□□□ 1.01
LINC00628-201ENST00000628516 IARSP41252 1262 aaKnown RBP21.34■■□□□ 1.01
LINC00628-201ENST00000628516 CALD1Q05682 793 aaKnown RBP21.34■■□□□ 1.01
LINC00628-201ENST00000628516 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
LINC00628-201ENST00000628516 PSMD1Q99460 953 aa21.34■■□□□ 1.01
LINC00628-201ENST00000628516 DBF4Q9UBU7 674 aaPredicted RBP21.34■■□□□ 1.01
LINC00628-201ENST00000628516 RNF123Q5XPI4 1314 aa21.33■■□□□ 1.01
LINC00628-201ENST00000628516 PPEF1O14829 653 aaPredicted RBP21.33■■□□□ 1.01
LINC00628-201ENST00000628516 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
LINC00628-201ENST00000628516 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
LINC00628-201ENST00000628516 TRMT112Q9UI30 125 aaKnown RBP21.33■■□□□ 1.01
LINC00628-201ENST00000628516 GNAI1P63096 354 aa21.32■■□□□ 1
LINC00628-201ENST00000628516 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
LINC00628-201ENST00000628516 PLBD2Q8NHP8 589 aa21.32■■□□□ 1
LINC00628-201ENST00000628516 ZNF541Q9H0D2 1346 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 SNED1Q8TER0 1413 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 IQCA1LA6NCM1 817 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 HCLS1P14317 486 aaPredicted RBP21.31■■□□□ 1
LINC00628-201ENST00000628516 CCDC184Q52MB2 194 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 ZNF428Q96B54 188 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 HYPKQ9NX55 129 aa21.31■■□□□ 1
LINC00628-201ENST00000628516 GRIPAP1Q4V328 841 aa21.3■■□□□ 1
LINC00628-201ENST00000628516 SLC51AQ86UW1 340 aa21.3■■□□□ 1
LINC00628-201ENST00000628516 JDP2Q8WYK2 163 aa21.3■■□□□ 1
LINC00628-201ENST00000628516 L3MBTL3Q96JM7 780 aaPredicted RBP21.3■■□□□ 1
LINC00628-201ENST00000628516 TMX4Q9H1E5 349 aaPredicted RBP21.3■■□□□ 1
LINC00628-201ENST00000628516 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
LINC00628-201ENST00000628516 FZD9O00144 591 aa21.29■■□□□ 1
LINC00628-201ENST00000628516 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
LINC00628-201ENST00000628516 KLRG1Q96E93 195 aa21.29■■□□□ 1
LINC00628-201ENST00000628516 ABCC4O15439 1325 aa21.29■■□□□ 1
LINC00628-201ENST00000628516 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
LINC00628-201ENST00000628516 POTEIP0CG38 1075 aa21.27■■□□□ 1
LINC00628-201ENST00000628516 POTEJP0CG39 1038 aa21.27■■□□□ 1
LINC00628-201ENST00000628516 CHADLQ6NUI6 762 aa21.27■■□□□ 1
LINC00628-201ENST00000628516 TAF1DQ9H5J8 278 aaPredicted RBP21.27■■□□□ 1
LINC00628-201ENST00000628516 ATP6V0A2Q9Y487 856 aa21.27■■□□□ 1
LINC00628-201ENST00000628516 DDX46Q7L014 1031 aaKnown RBP21.26■□□□□ 0.99
LINC00628-201ENST00000628516 LARGE2Q8N3Y3 721 aa21.26■□□□□ 0.99
LINC00628-201ENST00000628516 ISCA1Q9BUE6 129 aa21.26■□□□□ 0.99
LINC00628-201ENST00000628516 BBOX1O75936 387 aa21.25■□□□□ 0.99
LINC00628-201ENST00000628516 EIF6P56537 245 aaKnown RBP21.25■□□□□ 0.99
LINC00628-201ENST00000628516 RIC3Q7Z5B4 369 aa21.25■□□□□ 0.99
LINC00628-201ENST00000628516 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
LINC00628-201ENST00000628516 HACL1Q9UJ83 578 aa21.25■□□□□ 0.99
LINC00628-201ENST00000628516 SCN4AP35499 1836 aa21.25■□□□□ 0.99
LINC00628-201ENST00000628516 GOLGA2Q08379 1002 aa21.24■□□□□ 0.99
LINC00628-201ENST00000628516 LDHDQ86WU2 507 aa21.24■□□□□ 0.99
LINC00628-201ENST00000628516 GPC2Q8N158 579 aa21.24■□□□□ 0.99
LINC00628-201ENST00000628516 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
LINC00628-201ENST00000628516 PHAXQ9H814 394 aaKnown RBP21.24■□□□□ 0.99
LINC00628-201ENST00000628516 GJA3Q9Y6H8 435 aa21.24■□□□□ 0.99
LINC00628-201ENST00000628516 PPIP5K2O43314 1243 aa21.23■□□□□ 0.99
LINC00628-201ENST00000628516 GRAPQ13588 217 aa21.23■□□□□ 0.99
LINC00628-201ENST00000628516 EAPPQ56P03 285 aaPredicted RBP21.23■□□□□ 0.99
LINC00628-201ENST00000628516 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
LINC00628-201ENST00000628516 COL4A5P29400 1685 aa21.23■□□□□ 0.99
LINC00628-201ENST00000628516 LAMB2P55268 1798 aa21.23■□□□□ 0.99
LINC00628-201ENST00000628516 EPHX2P34913 555 aa21.22■□□□□ 0.99
LINC00628-201ENST00000628516 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
LINC00628-201ENST00000628516 SP8Q8IXZ3 490 aa21.22■□□□□ 0.99
LINC00628-201ENST00000628516 NIM1KQ8IY84 436 aa21.22■□□□□ 0.99
LINC00628-201ENST00000628516 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
LINC00628-201ENST00000628516 TRIM28Q13263 835 aaKnown RBP21.21■□□□□ 0.99
LINC00628-201ENST00000628516 AOC3Q16853 763 aa21.21■□□□□ 0.99
LINC00628-201ENST00000628516 DPP8Q6V1X1 898 aaPredicted RBP21.21■□□□□ 0.99
LINC00628-201ENST00000628516 SUPT20HQ8NEM7 779 aa21.21■□□□□ 0.99
LINC00628-201ENST00000628516 CHMP4AQ9BY43 222 aa21.21■□□□□ 0.99
LINC00628-201ENST00000628516 CLEC11AQ9Y240 323 aa21.21■□□□□ 0.99
LINC00628-201ENST00000628516 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
LINC00628-201ENST00000628516 CCDC30Q5VVM6 783 aa21.2■□□□□ 0.98
LINC00628-201ENST00000628516 MPNDQ8N594 471 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms