RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
SOX2-OT-242ENST00000627501 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
SOX2-OT-242ENST00000627501 RRAGCQ9HB90 399 aa17.87■□□□□ 0.45
SOX2-OT-242ENST00000627501 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
SOX2-OT-242ENST00000627501 PARP10Q53GL7 1025 aa17.86■□□□□ 0.45
SOX2-OT-242ENST00000627501 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
SOX2-OT-242ENST00000627501 SNED1Q8TER0 1413 aa17.86■□□□□ 0.45
SOX2-OT-242ENST00000627501 SBF1O95248 1867 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 CACNA1SQ13698 1873 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 CCDC93Q567U6 631 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 LTBP3Q9NS15 1303 aa17.85■□□□□ 0.45
SOX2-OT-242ENST00000627501 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 RTL5Q5HYW3 569 aaPredicted RBP17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 ANKRD13DQ6ZTN6 518 aa17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 RPGRQ92834 1020 aaKnown RBP17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
SOX2-OT-242ENST00000627501 KDM2BQ8NHM5 1336 aa17.83■□□□□ 0.44
SOX2-OT-242ENST00000627501 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
SOX2-OT-242ENST00000627501 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
SOX2-OT-242ENST00000627501 ISCA1Q9BUE6 129 aa17.83■□□□□ 0.44
SOX2-OT-242ENST00000627501 HYPKQ9NX55 129 aa17.83■□□□□ 0.44
SOX2-OT-242ENST00000627501 FER1L6Q2WGJ9 1857 aa17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 GLTPD2A6NH11 291 aa17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 POTECB2RU33 542 aa17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 SLC10A5Q5PT55 438 aa17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 COL4A5P29400 1685 aa17.82■□□□□ 0.44
SOX2-OT-242ENST00000627501 COL4A1P02462 1669 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 ABCC4O15439 1325 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 TOMM70O94826 608 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 DDNO94850 711 aaPredicted RBP17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
SOX2-OT-242ENST00000627501 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-242ENST00000627501 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
SOX2-OT-242ENST00000627501 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
SOX2-OT-242ENST00000627501 G2E3Q7L622 706 aa17.8■□□□□ 0.44
SOX2-OT-242ENST00000627501 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
SOX2-OT-242ENST00000627501 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
SOX2-OT-242ENST00000627501 HSPA6P17066 643 aa17.79■□□□□ 0.44
SOX2-OT-242ENST00000627501 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
SOX2-OT-242ENST00000627501 RBM17Q96I25 401 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-242ENST00000627501 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
SOX2-OT-242ENST00000627501 MYD88Q99836 296 aa17.79■□□□□ 0.44
SOX2-OT-242ENST00000627501 HTRA3P83110 453 aa17.78■□□□□ 0.44
SOX2-OT-242ENST00000627501 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
SOX2-OT-242ENST00000627501 ANKRD36CQ5JPF3 1778 aa17.78■□□□□ 0.44
SOX2-OT-242ENST00000627501 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
SOX2-OT-242ENST00000627501 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
SOX2-OT-242ENST00000627501 POTEJP0CG39 1038 aa17.77■□□□□ 0.44
SOX2-OT-242ENST00000627501 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.44
SOX2-OT-242ENST00000627501 RTKN2Q8IZC4 609 aa17.77■□□□□ 0.44
SOX2-OT-242ENST00000627501 IL16Q14005 1332 aa17.76■□□□□ 0.43
SOX2-OT-242ENST00000627501 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
SOX2-OT-242ENST00000627501 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-242ENST00000627501 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
SOX2-OT-242ENST00000627501 C16orf71Q8IYS4 520 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-242ENST00000627501 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-242ENST00000627501 PSMD1Q99460 953 aa17.75■□□□□ 0.43
SOX2-OT-242ENST00000627501 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
SOX2-OT-242ENST00000627501 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-242ENST00000627501 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-242ENST00000627501 CELF1Q92879 486 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-242ENST00000627501 ATP6V0A2Q9Y487 856 aa17.74■□□□□ 0.43
SOX2-OT-242ENST00000627501 CCDC88AQ3V6T2 1871 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 IGKV5-2P06315 115 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 MIER1Q8N108 512 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 LAMB2P55268 1798 aa17.73■□□□□ 0.43
SOX2-OT-242ENST00000627501 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 GRAPQ13588 217 aa17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 AOC3Q16853 763 aa17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 CWF19L2Q2TBE0 894 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 DDX46Q7L014 1031 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
SOX2-OT-242ENST00000627501 FZD9O00144 591 aa17.71■□□□□ 0.43
SOX2-OT-242ENST00000627501 VAMP4O75379 141 aa17.71■□□□□ 0.43
SOX2-OT-242ENST00000627501 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms