RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	NPR1	P16066	1061 aa		10.53	□□□□□ -0.72
TCF4-256	ENST00000626631	MCM10	Q7L590	875 aa		10.53	□□□□□ -0.72
TCF4-256	ENST00000626631	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.53	□□□□□ -0.72
TCF4-256	ENST00000626631	TNS4	Q8IZW8	715 aa		10.53	□□□□□ -0.72
TCF4-256	ENST00000626631	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.53	□□□□□ -0.72
TCF4-256	ENST00000626631	NPHP1	O15259	732 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	SEC24B	O95487	1268 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	MMRN1	Q13201	1228 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	TPTE2	Q6XPS3	522 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	CFAP53	Q96M91	514 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	NUDC	Q9Y266	331 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	PASK	Q96RG2	1323 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	BCOR	Q6W2J9	1755 aa		10.52	□□□□□ -0.73
TCF4-256	ENST00000626631	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	PPP2R1A	P30153	589 aa		10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	DCTN1	Q14203	1278 aa		10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	TAF7	Q15545	349 aa	Predicted RBP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	HLF	Q16534	295 aa		10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	CCDC93	Q567U6	631 aa		10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	RTF1	Q92541	710 aa	Known RBP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	ZNF652	Q9Y2D9	606 aa		10.51	□□□□□ -0.73
TCF4-256	ENST00000626631	ARFGEF2	Q9Y6D5	1785 aa		10.5	□□□□□ -0.73
TCF4-256	ENST00000626631	IQCA1L	A6NCM1	817 aa		10.5	□□□□□ -0.73
TCF4-256	ENST00000626631	ITGBL1	O95965	494 aa	Predicted RBP	10.5	□□□□□ -0.73
TCF4-256	ENST00000626631	OLFM4	Q6UX06	510 aa		10.5	□□□□□ -0.73
TCF4-256	ENST00000626631	LDHD	Q86WU2	507 aa		10.5	□□□□□ -0.73
TCF4-256	ENST00000626631	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.5	□□□□□ -0.73
TCF4-256	ENST00000626631	FZD9	O00144	591 aa		10.49	□□□□□ -0.73
TCF4-256	ENST00000626631	ALDH1B1	P30837	517 aa		10.49	□□□□□ -0.73
TCF4-256	ENST00000626631	RTKN2	Q8IZC4	609 aa		10.49	□□□□□ -0.73
TCF4-256	ENST00000626631	MIS18A	Q9NYP9	233 aa		10.49	□□□□□ -0.73
TCF4-256	ENST00000626631	MKRN1	Q9UHC7	482 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-256	ENST00000626631	ST18	O60284	1047 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	CRY2	Q49AN0	593 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	SYNE4	Q8N205	404 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	TRPC6	Q9Y210	931 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	SCN4A	P35499	1836 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	ZNF541	Q9H0D2	1346 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	CNTNAP1	P78357	1384 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	SNED1	Q8TER0	1413 aa		10.48	□□□□□ -0.73
TCF4-256	ENST00000626631	CACNA1S	Q13698	1873 aa		10.47	□□□□□ -0.73
TCF4-256	ENST00000626631	FAM177B	A6PVY3	158 aa		10.47	□□□□□ -0.73
TCF4-256	ENST00000626631	ERVV-1	B6SEH8	477 aa		10.47	□□□□□ -0.73
TCF4-256	ENST00000626631	PSMD1	Q99460	953 aa		10.47	□□□□□ -0.73
TCF4-256	ENST00000626631	HACL1	Q9UJ83	578 aa		10.47	□□□□□ -0.73
TCF4-256	ENST00000626631	TMEM88B	A6NKF7	163 aa		10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	FOXN1	O15353	648 aa		10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	HOXA10	P31260	410 aa	Predicted RBP	10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	EPHX2	P34913	555 aa		10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	IARS	P41252	1262 aa	Known RBP	10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	VEGFB	P49765	207 aa		10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	EIF4A1	P60842	406 aa	Known RBP	10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	GPC2	Q8N158	579 aa		10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	PLEKHF1	Q96S99	279 aa		10.46	□□□□□ -0.73
TCF4-256	ENST00000626631	ADAMTSL1	Q8N6G6	1762 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	MAP3K15	Q6ZN16	1313 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	GTF2E1	P29083	439 aa	Predicted RBP	10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	EAPP	Q56P03	285 aa	Predicted RBP	10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	CC2D2B	Q6DHV5	1058 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	TTLL7	Q6ZT98	887 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	PNMA8A	Q86V59	439 aa	Predicted RBP	10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	NUTM1	Q86Y26	1132 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	SPNS2	Q8IVW8	549 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	CNTROB	Q8N137	903 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	PNISR	Q8TF01	805 aa	Known RBP	10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	KIF12	Q96FN5	646 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	NYX	Q9GZU5	481 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	PRDM10	Q9NQV6	1147 aa		10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	COLQ	Q9Y215	455 aa	Predicted RBP	10.45	□□□□□ -0.74
TCF4-256	ENST00000626631	ABCC12	Q96J65	1359 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	RNF123	Q5XPI4	1314 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	TIE1	P35590	1138 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	ZNF34	Q8IZ26	560 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	NGEF	Q8N5V2	710 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	SLAIN1	Q8ND83	568 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	WBP1L	Q9NX94	342 aa		10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	RRP7A	Q9Y3A4	280 aa	Known RBP	10.44	□□□□□ -0.74
TCF4-256	ENST00000626631	RIC1	Q4ADV7	1423 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	UBN2	Q6ZU65	1347 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	RASSF10	A6NK89	507 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	GRIPAP1	Q4V328	841 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	SUSD4	Q5VX71	490 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	MAP1S	Q66K74	1059 aa	Predicted RBP	10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	JDP2	Q8WYK2	163 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	CRAMP1	Q96RY5	1269 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	COL4A5	P29400	1685 aa		10.43	□□□□□ -0.74
TCF4-256	ENST00000626631	NUP98	P52948	1817 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	NTSR2	O95665	410 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	GPT	P24298	496 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	CTCF	P49711	727 aa	Predicted RBP	10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	NFE2L2	Q16236	605 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	DEFB115	Q30KQ5	88 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	C3orf67	Q6ZVT6	689 aa		10.42	□□□□□ -0.74

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