RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 LMNB1P20700 586 aa28.85■■■□□ 2.21
SF1-220ENST00000626028 SLC10A5Q5PT55 438 aa28.85■■■□□ 2.21
SF1-220ENST00000626028 NUTM1Q86Y26 1132 aa28.85■■■□□ 2.21
SF1-220ENST00000626028 LAMB2P55268 1798 aa28.84■■■□□ 2.21
SF1-220ENST00000626028 ELL2O00472 640 aaPredicted RBP28.84■■■□□ 2.21
SF1-220ENST00000626028 C21orf2O43822 256 aa28.83■■■□□ 2.21
SF1-220ENST00000626028 HOXA10P31260 410 aaPredicted RBP28.83■■■□□ 2.21
SF1-220ENST00000626028 NLRP10Q86W26 655 aa28.83■■■□□ 2.21
SF1-220ENST00000626028 TSR2Q969E8 191 aaKnown RBP28.83■■■□□ 2.21
SF1-220ENST00000626028 TIAM2Q8IVF5 1701 aa28.83■■■□□ 2.21
SF1-220ENST00000626028 RNF181Q9P0P0 153 aa28.82■■■□□ 2.2
SF1-220ENST00000626028 GOLGA2Q08379 1002 aa28.81■■■□□ 2.2
SF1-220ENST00000626028 TRIM28Q13263 835 aaKnown RBP28.81■■■□□ 2.2
SF1-220ENST00000626028 C7orf43Q8WVR3 580 aa28.81■■■□□ 2.2
SF1-220ENST00000626028 NFKBIEO00221 500 aa28.8■■■□□ 2.2
SF1-220ENST00000626028 TWISTNBQ3B726 338 aaPredicted RBP28.8■■■□□ 2.2
SF1-220ENST00000626028 TSPYL6Q8N831 410 aa28.8■■■□□ 2.2
SF1-220ENST00000626028 RPGRQ92834 1020 aaKnown RBP28.8■■■□□ 2.2
SF1-220ENST00000626028 NLRP3Q96P20 1036 aa28.8■■■□□ 2.2
SF1-220ENST00000626028 ISCA1Q9BUE6 129 aa28.79■■■□□ 2.2
SF1-220ENST00000626028 SH3TC1Q8TE82 1336 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 FANCIQ9NVI1 1328 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 CCER2I3L3R5 266 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 DDX58O95786 925 aaKnown RBP28.78■■■□□ 2.2
SF1-220ENST00000626028 RASSF7Q02833 373 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 GRIPAP1Q4V328 841 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 CRAMP1Q96RY5 1269 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 STK31Q9BXU1 1019 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 TAOK3Q9H2K8 898 aa28.78■■■□□ 2.2
SF1-220ENST00000626028 DDX60Q8IY21 1712 aaKnown RBP28.77■■■□□ 2.2
SF1-220ENST00000626028 CCDC93Q567U6 631 aa28.77■■■□□ 2.2
SF1-220ENST00000626028 CC2D2BQ6DHV5 1058 aa28.77■■■□□ 2.2
SF1-220ENST00000626028 MYH16Q9H6N6 1097 aa28.77■■■□□ 2.2
SF1-220ENST00000626028 TRMT112Q9UI30 125 aaKnown RBP28.77■■■□□ 2.2
SF1-220ENST00000626028 RIC3Q7Z5B4 369 aa28.76■■■□□ 2.19
SF1-220ENST00000626028 RTKN2Q8IZC4 609 aa28.76■■■□□ 2.19
SF1-220ENST00000626028 KDM2BQ8NHM5 1336 aa28.75■■■□□ 2.19
SF1-220ENST00000626028 SENP3-EIF4A1A0A087X0R7 540 aa28.75■■■□□ 2.19
SF1-220ENST00000626028 C1QTNF8P60827 252 aa28.75■■■□□ 2.19
SF1-220ENST00000626028 RBM17Q96I25 401 aaKnown RBP28.75■■■□□ 2.19
SF1-220ENST00000626028 PHAXQ9H814 394 aaKnown RBP28.75■■■□□ 2.19
SF1-220ENST00000626028 SALL2Q9Y467 1007 aaPredicted RBP28.75■■■□□ 2.19
SF1-220ENST00000626028 ZNF526Q8TF50 670 aaPredicted RBP28.74■■■□□ 2.19
SF1-220ENST00000626028 ZNF219Q9P2Y4 722 aaPredicted RBP28.73■■■□□ 2.19
SF1-220ENST00000626028 ZNF521Q96K83 1311 aa28.71■■■□□ 2.19
SF1-220ENST00000626028 HSP90B1P14625 803 aaKnown RBP28.71■■■□□ 2.19
SF1-220ENST00000626028 PRELPP51888 382 aa28.71■■■□□ 2.19
SF1-220ENST00000626028 CCDC191Q8NCU4 936 aa28.7■■■□□ 2.18
SF1-220ENST00000626028 FKBP4Q02790 459 aaKnown RBP eCLIP28.69■■■□□ 2.18
SF1-220ENST00000626028 KSR2Q6VAB6 950 aa28.69■■■□□ 2.18
SF1-220ENST00000626028 METTL22Q9BUU2 404 aaPredicted RBP28.69■■■□□ 2.18
SF1-220ENST00000626028 SNED1Q8TER0 1413 aa28.69■■■□□ 2.18
SF1-220ENST00000626028 ATP5J2-PTCD1G3V325 749 aa28.68■■■□□ 2.18
SF1-220ENST00000626028 VAMP4O75379 141 aa28.68■■■□□ 2.18
SF1-220ENST00000626028 PSMD1Q99460 953 aa28.68■■■□□ 2.18
SF1-220ENST00000626028 MYH3P11055 1940 aa28.67■■■□□ 2.18
SF1-220ENST00000626028 GLTPD2A6NH11 291 aa28.67■■■□□ 2.18
SF1-220ENST00000626028 KIF3CO14782 793 aa28.67■■■□□ 2.18
SF1-220ENST00000626028 SLC4A2P04920 1241 aa28.67■■■□□ 2.18
SF1-220ENST00000626028 C3orf67Q6ZVT6 689 aa28.67■■■□□ 2.18
SF1-220ENST00000626028 BBOX1O75936 387 aa28.66■■■□□ 2.18
SF1-220ENST00000626028 HCLS1P14317 486 aaPredicted RBP28.66■■■□□ 2.18
SF1-220ENST00000626028 EXOSC9Q06265 439 aaKnown RBP28.66■■■□□ 2.18
SF1-220ENST00000626028 ZBTB38Q8NAP3 1195 aaPredicted RBP28.66■■■□□ 2.18
SF1-220ENST00000626028 TMX4Q9H1E5 349 aaPredicted RBP28.66■■■□□ 2.18
SF1-220ENST00000626028 PPEF1O14829 653 aaPredicted RBP28.65■■■□□ 2.18
SF1-220ENST00000626028 DPY19L2Q6NUT2 758 aa28.65■■■□□ 2.18
SF1-220ENST00000626028 FAM89AQ96GI7 184 aa28.65■■■□□ 2.18
SF1-220ENST00000626028 TAF1P21675 1872 aa28.65■■■□□ 2.18
SF1-220ENST00000626028 WDR90Q96KV7 1748 aa28.64■■■□□ 2.18
SF1-220ENST00000626028 SF3B3Q15393 1217 aaKnown RBP28.64■■■□□ 2.18
SF1-220ENST00000626028 DDX46Q7L014 1031 aaKnown RBP28.64■■■□□ 2.18
SF1-220ENST00000626028 TMC4Q7Z404 712 aa28.64■■■□□ 2.18
SF1-220ENST00000626028 SYNE4Q8N205 404 aa28.64■■■□□ 2.18
SF1-220ENST00000626028 MYD88Q99836 296 aa28.64■■■□□ 2.18
SF1-220ENST00000626028 SPINK5Q9NQ38 1064 aaPredicted RBP28.64■■■□□ 2.18
SF1-220ENST00000626028 CWC25Q9NXE8 425 aaPredicted RBP28.64■■■□□ 2.18
SF1-220ENST00000626028 MAP3K2Q9Y2U5 619 aa28.64■■■□□ 2.18
SF1-220ENST00000626028 PI4KAP2A4QPH2 592 aa28.63■■■□□ 2.17
SF1-220ENST00000626028 NEXNQ0ZGT2 675 aa28.63■■■□□ 2.17
SF1-220ENST00000626028 PI4KAP1Q8N8J0 262 aa28.63■■■□□ 2.17
SF1-220ENST00000626028 ABCC4O15439 1325 aa28.63■■■□□ 2.17
SF1-220ENST00000626028 PCCAP05165 728 aaPredicted RBP28.62■■■□□ 2.17
SF1-220ENST00000626028 NMRK2Q9NPI5 230 aa28.62■■■□□ 2.17
SF1-220ENST00000626028 ATP6V0A2Q9Y487 856 aa28.62■■■□□ 2.17
SF1-220ENST00000626028 LRRC37AA6NMS7 1700 aa28.62■■■□□ 2.17
SF1-220ENST00000626028 TOMM70O94826 608 aa28.61■■■□□ 2.17
SF1-220ENST00000626028 IRS4O14654 1257 aaPredicted RBP28.6■■■□□ 2.17
SF1-220ENST00000626028 FLIIQ13045 1269 aa28.6■■■□□ 2.17
SF1-220ENST00000626028 GRAPQ13588 217 aa28.6■■■□□ 2.17
SF1-220ENST00000626028 GRAPLQ8TC17 118 aaPredicted RBP28.6■■■□□ 2.17
SF1-220ENST00000626028 VPS33BQ9H267 617 aa28.6■■■□□ 2.17
SF1-220ENST00000626028 E9PSI1 815 aa28.59■■■□□ 2.17
SF1-220ENST00000626028 OLFM4Q6UX06 510 aa28.59■■■□□ 2.17
SF1-220ENST00000626028 SP8Q8IXZ3 490 aa28.59■■■□□ 2.17
SF1-220ENST00000626028 SCN4AP35499 1836 aa28.59■■■□□ 2.17
SF1-220ENST00000626028 IARSP41252 1262 aaKnown RBP28.58■■■□□ 2.17
SF1-220ENST00000626028 G2E3Q7L622 706 aa28.58■■■□□ 2.17
SF1-220ENST00000626028 TCERG1O14776 1098 aaKnown RBP28.57■■■□□ 2.16
SF1-220ENST00000626028 VEGFAP15692 232 aaPredicted RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms