RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-205	ENST00000625662	RARS	P54136	660 aa	Known RBP	13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	ZNF790	Q6PG37	636 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	EXOC6B	Q9Y2D4	811 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	DDX49	Q9Y6V7	483 aa	Known RBP	13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	RTL1	A6NKG5	1358 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	ATP2B1	P20020	1258 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	NEK4	P51957	841 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	TCIRG1	Q13488	830 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	SYCP1	Q15431	976 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	DPP8	Q6V1X1	898 aa	Predicted RBP	13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	ANKAR	Q7Z5J8	1434 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	PLBD2	Q8NHP8	589 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662	CHMP5	Q9NZZ3	219 aa		13.79	□□□□□ -0.2
CHD2-205	ENST00000625662		F6X3S4	739 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	SPATA31A6	Q5VVP1	1343 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	NAA16	Q6N069	864 aa	Predicted RBP	13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	NUTM1	Q86Y26	1132 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	BOLA2	Q9H3K6	86 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662		H7C1D1	291 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	IPO9	Q96P70	1041 aa	Known RBP	13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	CWC27	Q6UX04	472 aa	Known RBP	13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	GNAT2	P19087	354 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	DACH1	Q9UI36	760 aa		13.78	□□□□□ -0.2
CHD2-205	ENST00000625662	BAG4	O95429	457 aa	Known RBP	13.77	□□□□□ -0.2
CHD2-205	ENST00000625662	SDF4	Q9BRK5	362 aa		13.77	□□□□□ -0.2
CHD2-205	ENST00000625662	KAT14	Q9H8E8	782 aa		13.77	□□□□□ -0.2
CHD2-205	ENST00000625662	DENND2A	Q9ULE3	1009 aa		13.77	□□□□□ -0.2
CHD2-205	ENST00000625662	CCDC191	Q8NCU4	936 aa		13.77	□□□□□ -0.21
CHD2-205	ENST00000625662	PAF1	Q8N7H5	531 aa		13.77	□□□□□ -0.21
CHD2-205	ENST00000625662	FAM83G	A6ND36	823 aa		13.77	□□□□□ -0.21
CHD2-205	ENST00000625662	TSPY2	A6NKD2	308 aa		13.77	□□□□□ -0.21
CHD2-205	ENST00000625662	PDRG1	Q9NUG6	133 aa		13.77	□□□□□ -0.21
CHD2-205	ENST00000625662	ERBB4	Q15303	1308 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	SHROOM2	Q13796	1616 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	NPC1L1	Q9UHC9	1359 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	PDE8A	O60658	829 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	TMEM266	Q2M3C6	531 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	LMBR1L	Q6UX01	489 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	TMC4	Q7Z404	712 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	PATL2	C9JE40	543 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	KIN	O60870	393 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	LDHB	P07195	334 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	KIF24	Q5T7B8	1368 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	UFL1	O94874	794 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	MYCN	P04198	464 aa	Predicted RBP	13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	GNAQ	P50148	359 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	RBM26	Q5T8P6	1007 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	TTC6	Q86TZ1	520 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	DDX17	Q92841	729 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	PICK1	Q9NRD5	415 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	BCS1L	Q9Y276	419 aa		13.76	□□□□□ -0.21
CHD2-205	ENST00000625662	MAP4K4	O95819	1239 aa	Predicted RBP	13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	SEPT12	Q8IYM1	358 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	SLC12A7	Q9Y666	1083 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	CYP7A1	P22680	504 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	ABCC3	O15438	1527 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	GOLGA6L3	A6NEY3	463 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	MATR3	P43243	847 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	FILIP1L	Q4L180	1135 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	AFF2	P51816	1311 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	CNNM2	Q9H8M5	875 aa		13.75	□□□□□ -0.21
CHD2-205	ENST00000625662	WDR17	Q8IZU2	1322 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	TNFAIP1	Q13829	316 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	KRT23	Q9C075	422 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	MFSD6	Q6ZSS7	791 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	LETM1	O95202	739 aa	Predicted RBP	13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	TMTC2	Q8N394	836 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	TBC1D22A	Q8WUA7	517 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	JAKMIP1	Q96N16	626 aa	Known RBP	13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	TMOD4	Q9NZQ9	345 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	MYOM2	P54296	1465 aa		13.74	□□□□□ -0.21
CHD2-205	ENST00000625662	SPDYE4	A6NLX3	237 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	RIMBP2	O15034	1052 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	PPP1R12B	O60237	982 aa	Predicted RBP	13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	ZHX3	Q9H4I2	956 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	9e-8	■■■■■ 31.1
CHD2-205	ENST00000625662	INSR	P06213	1382 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	KIAA0232	Q92628	1395 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662		F8W031	263 aa	Predicted RBP	13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	GOLIM4	O00461	696 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	IFIT3	O14879	490 aa	Known RBP	13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	BIN2	Q9UBW5	565 aa	Predicted RBP	13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	ERCC6L2	Q5T890	1561 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	SBNO2	Q9Y2G9	1366 aa		13.73	□□□□□ -0.21
CHD2-205	ENST00000625662	MAP3K4	Q9Y6R4	1608 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	KIF20A	O95235	890 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	ARHGAP27	Q6ZUM4	889 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	BRINP3	Q76B58	766 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	MPND	Q8N594	471 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	WDR66	Q8TBY9	1149 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	PDCL3	Q9H2J4	239 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	TSPY3	P0CV98	308 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	TSPY8	P0CW00	308 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	KDM4A	O75164	1064 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	C2CD5	Q86YS7	1000 aa		13.72	□□□□□ -0.21
CHD2-205	ENST00000625662	TXLNB	Q8N3L3	684 aa		13.72	□□□□□ -0.21

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