RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 TRMT112Q9UI30 125 aaKnown RBP24.45■■□□□ 1.5
LINC01006-208ENST00000624071 DDX58O95786 925 aaKnown RBP24.44■■□□□ 1.5
LINC01006-208ENST00000624071 NPR1P16066 1061 aa24.44■■□□□ 1.5
LINC01006-208ENST00000624071 C3orf67Q6ZVT6 689 aa24.44■■□□□ 1.5
LINC01006-208ENST00000624071 CNKSR1Q969H4 720 aa24.44■■□□□ 1.5
LINC01006-208ENST00000624071 CDCA7LQ96GN5 454 aa24.44■■□□□ 1.5
LINC01006-208ENST00000624071 MYD88Q99836 296 aa24.44■■□□□ 1.5
LINC01006-208ENST00000624071 E9PSI1 815 aa24.43■■□□□ 1.5
LINC01006-208ENST00000624071 C21orf2O43822 256 aa24.43■■□□□ 1.5
LINC01006-208ENST00000624071 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
LINC01006-208ENST00000624071 COL11A2P13942 1736 aaPredicted RBP24.42■■□□□ 1.5
LINC01006-208ENST00000624071 HCLS1P14317 486 aaPredicted RBP24.42■■□□□ 1.5
LINC01006-208ENST00000624071 SLFN5Q08AF3 891 aa24.42■■□□□ 1.5
LINC01006-208ENST00000624071 PRPF40BQ6NWY9 871 aaKnown RBP24.42■■□□□ 1.5
LINC01006-208ENST00000624071 MAP3K2Q9Y2U5 619 aa24.42■■□□□ 1.5
LINC01006-208ENST00000624071 PI4KAP2A4QPH2 592 aa24.41■■□□□ 1.5
LINC01006-208ENST00000624071 RTL5Q5HYW3 569 aaPredicted RBP24.41■■□□□ 1.5
LINC01006-208ENST00000624071 PI4KAP1Q8N8J0 262 aa24.41■■□□□ 1.5
LINC01006-208ENST00000624071 SH3TC1Q8TE82 1336 aa24.4■■□□□ 1.5
LINC01006-208ENST00000624071 RASSF7Q02833 373 aa24.4■■□□□ 1.5
LINC01006-208ENST00000624071 CRY2Q49AN0 593 aa24.4■■□□□ 1.5
LINC01006-208ENST00000624071 SLC10A5Q5PT55 438 aa24.4■■□□□ 1.5
LINC01006-208ENST00000624071 KSR2Q6VAB6 950 aa24.4■■□□□ 1.5
LINC01006-208ENST00000624071 ZNF784Q8NCA9 323 aaPredicted RBP24.4■■□□□ 1.5
LINC01006-208ENST00000624071 FLIIQ13045 1269 aa24.39■■□□□ 1.49
LINC01006-208ENST00000624071 RPGRQ92834 1020 aaKnown RBP24.39■■□□□ 1.49
LINC01006-208ENST00000624071 FAM89AQ96GI7 184 aa24.39■■□□□ 1.49
LINC01006-208ENST00000624071 NLRP3Q96P20 1036 aa24.39■■□□□ 1.49
LINC01006-208ENST00000624071 METTL22Q9BUU2 404 aaPredicted RBP24.39■■□□□ 1.49
LINC01006-208ENST00000624071 TNRC6CQ9HCJ0 1690 aaKnown RBP24.39■■□□□ 1.49
LINC01006-208ENST00000624071 TRIM28Q13263 835 aaKnown RBP24.38■■□□□ 1.49
LINC01006-208ENST00000624071 DLEC1Q9Y238 1755 aa24.38■■□□□ 1.49
LINC01006-208ENST00000624071 ADCY9O60503 1353 aa24.38■■□□□ 1.49
LINC01006-208ENST00000624071 RNF123Q5XPI4 1314 aa24.37■■□□□ 1.49
LINC01006-208ENST00000624071 FKBP5Q13451 457 aaPredicted RBP24.37■■□□□ 1.49
LINC01006-208ENST00000624071 C9orf131Q5VYM1 1079 aa24.37■■□□□ 1.49
LINC01006-208ENST00000624071 RIC1Q4ADV7 1423 aa24.36■■□□□ 1.49
LINC01006-208ENST00000624071 ALDH1B1P30837 517 aa24.36■■□□□ 1.49
LINC01006-208ENST00000624071 OLFM4Q6UX06 510 aa24.36■■□□□ 1.49
LINC01006-208ENST00000624071 JARID2Q92833 1246 aaPredicted RBP24.36■■□□□ 1.49
LINC01006-208ENST00000624071 CHD4Q14839 1912 aa24.35■■□□□ 1.49
LINC01006-208ENST00000624071 NFKBIEO00221 500 aa24.35■■□□□ 1.49
LINC01006-208ENST00000624071 RBM17Q96I25 401 aaKnown RBP24.35■■□□□ 1.49
LINC01006-208ENST00000624071 RNF181Q9P0P0 153 aa24.35■■□□□ 1.49
LINC01006-208ENST00000624071 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
LINC01006-208ENST00000624071 ARFGEF1Q9Y6D6 1849 aa24.34■■□□□ 1.49
LINC01006-208ENST00000624071 HOXA10P31260 410 aaPredicted RBP24.34■■□□□ 1.49
LINC01006-208ENST00000624071 CCDC191Q8NCU4 936 aa24.34■■□□□ 1.49
LINC01006-208ENST00000624071 ZNF526Q8TF50 670 aaPredicted RBP24.34■■□□□ 1.49
LINC01006-208ENST00000624071 C7orf43Q8WVR3 580 aa24.34■■□□□ 1.49
LINC01006-208ENST00000624071 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
LINC01006-208ENST00000624071 ARFGEF2Q9Y6D5 1785 aa24.34■■□□□ 1.49
LINC01006-208ENST00000624071 IGKV5-2P06315 115 aa24.33■■□□□ 1.49
LINC01006-208ENST00000624071 PRELPP51888 382 aa24.33■■□□□ 1.49
LINC01006-208ENST00000624071 HNRNPUQ00839 825 aaKnown RBP eCLIP24.33■■□□□ 1.49
LINC01006-208ENST00000624071 NEXNQ0ZGT2 675 aa24.33■■□□□ 1.49
LINC01006-208ENST00000624071 IRS4O14654 1257 aaPredicted RBP24.32■■□□□ 1.48
LINC01006-208ENST00000624071 CWF19L2Q2TBE0 894 aaKnown RBP24.32■■□□□ 1.48
LINC01006-208ENST00000624071 TRMT2AQ8IZ69 625 aaKnown RBP24.32■■□□□ 1.48
LINC01006-208ENST00000624071 ZBTB38Q8NAP3 1195 aaPredicted RBP24.32■■□□□ 1.48
LINC01006-208ENST00000624071 CRAMP1Q96RY5 1269 aa24.32■■□□□ 1.48
LINC01006-208ENST00000624071 SLX4Q8IY92 1834 aa24.31■■□□□ 1.48
LINC01006-208ENST00000624071 F6X3S4 739 aa24.31■■□□□ 1.48
LINC01006-208ENST00000624071 SLC51AQ86UW1 340 aa24.31■■□□□ 1.48
LINC01006-208ENST00000624071 DNAAF4Q8WXU2 420 aa24.31■■□□□ 1.48
LINC01006-208ENST00000624071 CCDC93Q567U6 631 aa24.3■■□□□ 1.48
LINC01006-208ENST00000624071 SOGA3Q5TF21 947 aa24.3■■□□□ 1.48
LINC01006-208ENST00000624071 PCCAP05165 728 aaPredicted RBP24.29■■□□□ 1.48
LINC01006-208ENST00000624071 LMNB1P20700 586 aa24.29■■□□□ 1.48
LINC01006-208ENST00000624071 TAOK3Q9H2K8 898 aa24.29■■□□□ 1.48
LINC01006-208ENST00000624071 NEURL1BA8MQ27 555 aa24.28■■□□□ 1.48
LINC01006-208ENST00000624071 PPEF1O14829 653 aaPredicted RBP24.28■■□□□ 1.48
LINC01006-208ENST00000624071 DDX46Q7L014 1031 aaKnown RBP24.28■■□□□ 1.48
LINC01006-208ENST00000624071 BCL2L13Q9BXK5 485 aa24.28■■□□□ 1.48
LINC01006-208ENST00000624071 ABCC4O15439 1325 aa24.28■■□□□ 1.48
LINC01006-208ENST00000624071 MRPL50Q8N5N7 158 aaKnown RBP24.27■■□□□ 1.48
LINC01006-208ENST00000624071 SSH1Q8WYL5 1049 aa24.27■■□□□ 1.48
LINC01006-208ENST00000624071 SF3B3Q15393 1217 aaKnown RBP24.25■■□□□ 1.47
LINC01006-208ENST00000624071 GPBP1L1Q9HC44 474 aaPredicted RBP24.25■■□□□ 1.47
LINC01006-208ENST00000624071 RTKN2Q8IZC4 609 aa24.24■■□□□ 1.47
LINC01006-208ENST00000624071 LINS1Q8NG48 757 aa24.24■■□□□ 1.47
LINC01006-208ENST00000624071 CCDC85AQ96PX6 553 aaPredicted RBP24.24■■□□□ 1.47
LINC01006-208ENST00000624071 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
LINC01006-208ENST00000624071 FKBP4Q02790 459 aaKnown RBP eCLIP24.23■■□□□ 1.47
LINC01006-208ENST00000624071 GRAPQ13588 217 aa24.23■■□□□ 1.47
LINC01006-208ENST00000624071 GCKRQ14397 625 aa24.23■■□□□ 1.47
LINC01006-208ENST00000624071 SLC4A10Q6U841 1118 aa24.23■■□□□ 1.47
LINC01006-208ENST00000624071 GRAPLQ8TC17 118 aaPredicted RBP24.23■■□□□ 1.47
LINC01006-208ENST00000624071 ZNF277Q9NRM2 450 aaPredicted RBP24.23■■□□□ 1.47
LINC01006-208ENST00000624071 LTBP3Q9NS15 1303 aa24.23■■□□□ 1.47
LINC01006-208ENST00000624071 PDE8AO60658 829 aa24.22■■□□□ 1.47
LINC01006-208ENST00000624071 BBOX1O75936 387 aa24.22■■□□□ 1.47
LINC01006-208ENST00000624071 HSP90B1P14625 803 aaKnown RBP24.22■■□□□ 1.47
LINC01006-208ENST00000624071 UBE3BQ7Z3V4 1068 aa24.22■■□□□ 1.47
LINC01006-208ENST00000624071 SMC4Q9NTJ3 1288 aa24.22■■□□□ 1.47
LINC01006-208ENST00000624071 ATP6V0A2Q9Y487 856 aa24.22■■□□□ 1.47
LINC01006-208ENST00000624071 CDHR2Q9BYE9 1310 aa24.21■■□□□ 1.47
LINC01006-208ENST00000624071 H7C1W4 665 aa24.21■■□□□ 1.47
LINC01006-208ENST00000624071 BEND3Q5T5X7 828 aa24.21■■□□□ 1.47
LINC01006-208ENST00000624071 CC2D2BQ6DHV5 1058 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms