RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 AMIGO3Q86WK7 504 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 PKNOX2Q96KN3 472 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 ZNF831Q5JPB2 1677 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 GNAI2P04899 355 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 HSCBQ8IWL3 235 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 PROM2Q8N271 834 aa14.21□□□□□ -0.13
ATRX-213ENST00000624032 AFDNP55196 1824 aaKnown RBP14.21□□□□□ -0.14
ATRX-213ENST00000624032 GCKRQ14397 625 aa14.21□□□□□ -0.14
ATRX-213ENST00000624032 CEP85Q6P2H3 762 aa14.21□□□□□ -0.14
ATRX-213ENST00000624032 RREB1Q92766 1687 aa14.2□□□□□ -0.14
ATRX-213ENST00000624032 GNPATO15228 680 aa14.2□□□□□ -0.14
ATRX-213ENST00000624032 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
ATRX-213ENST00000624032 GPTP24298 496 aa14.2□□□□□ -0.14
ATRX-213ENST00000624032 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
ATRX-213ENST00000624032 ESPNB1AK53 854 aa14.19□□□□□ -0.14
ATRX-213ENST00000624032 GRM8O00222 908 aa14.19□□□□□ -0.14
ATRX-213ENST00000624032 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
ATRX-213ENST00000624032 HDAC1Q13547 482 aaPredicted RBP14.19□□□□□ -0.14
ATRX-213ENST00000624032 ANKRD44Q8N8A2 993 aa14.19□□□□□ -0.14
ATRX-213ENST00000624032 COL15A1P39059 1388 aa14.19□□□□□ -0.14
ATRX-213ENST00000624032 TXNRD1Q16881 649 aa14.18□□□□□ -0.14
ATRX-213ENST00000624032 GIGYF2Q6Y7W6 1299 aaKnown RBP14.18□□□□□ -0.14
ATRX-213ENST00000624032 SUCLG2Q96I99 432 aa14.18□□□□□ -0.14
ATRX-213ENST00000624032 A0A087WZG4 1122 aa14.18□□□□□ -0.14
ATRX-213ENST00000624032 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
ATRX-213ENST00000624032 RC3H1Q5TC82 1133 aaKnown RBP14.18□□□□□ -0.14
ATRX-213ENST00000624032 UBE3BQ7Z3V4 1068 aa14.18□□□□□ -0.14
ATRX-213ENST00000624032 PHF14O94880 888 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 CAMTA2O94983 1202 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 KAZALD1Q96I82 304 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 NUP98P52948 1817 aa14.17□□□□□ -0.14
ATRX-213ENST00000624032 CWC25Q9NXE8 425 aaPredicted RBP14.17□□□□□ -0.14
ATRX-213ENST00000624032 RPAP2Q8IXW5 612 aaPredicted RBP14.16□□□□□ -0.14
ATRX-213ENST00000624032 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
ATRX-213ENST00000624032 SRP68Q9UHB9 627 aaKnown RBP14.16□□□□□ -0.14
ATRX-213ENST00000624032 EPHA10Q5JZY3 1008 aa14.16□□□□□ -0.14
ATRX-213ENST00000624032 AK7Q96M32 723 aa14.16□□□□□ -0.14
ATRX-213ENST00000624032 UTYO14607 1347 aa14.16□□□□□ -0.14
ATRX-213ENST00000624032 ERVV-1B6SEH8 477 aa14.16□□□□□ -0.14
ATRX-213ENST00000624032 SLC27A3Q5K4L6 730 aa14.16□□□□□ -0.14
ATRX-213ENST00000624032 RTCBQ9Y3I0 505 aaKnown RBP14.16□□□□□ -0.14
ATRX-213ENST00000624032 ATP8B2P98198 1209 aa14.15□□□□□ -0.14
ATRX-213ENST00000624032 SYNE4Q8N205 404 aa14.15□□□□□ -0.14
ATRX-213ENST00000624032 TNS1Q9HBL0 1735 aaKnown RBP14.15□□□□□ -0.14
ATRX-213ENST00000624032 FAM177BA6PVY3 158 aa14.15□□□□□ -0.14
ATRX-213ENST00000624032 PLSCR1O15162 318 aa14.15□□□□□ -0.14
ATRX-213ENST00000624032 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
ATRX-213ENST00000624032 CCDC191Q8NCU4 936 aa14.15□□□□□ -0.14
ATRX-213ENST00000624032 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
ATRX-213ENST00000624032 BICC1Q9H694 974 aaKnown RBP14.15□□□□□ -0.14
ATRX-213ENST00000624032 APBB1O00213 710 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 CASP7P55210 303 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 H7C1W4 665 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 DDIT3P35638 169 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 USPL1Q5W0Q7 1092 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 NLRP10Q86W26 655 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 FAM89AQ96GI7 184 aa14.14□□□□□ -0.15
ATRX-213ENST00000624032 EN1Q05925 392 aaPredicted RBP14.13□□□□□ -0.15
ATRX-213ENST00000624032 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 GBP4Q96PP9 640 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
ATRX-213ENST00000624032 ZNF34Q8IZ26 560 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 SNX21Q969T3 373 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 SRGAP3O43295 1099 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 TRIM28Q13263 835 aaKnown RBP14.13□□□□□ -0.15
ATRX-213ENST00000624032 SKOR2Q2VWA4 1001 aaPredicted RBP14.13□□□□□ -0.15
ATRX-213ENST00000624032 ZMYND15Q9H091 742 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 BCL2L12Q9HB09 334 aa14.13□□□□□ -0.15
ATRX-213ENST00000624032 PTMSP20962 102 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 HSP90AB3PQ58FF7 597 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 BICDL1Q6ZP65 573 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
ATRX-213ENST00000624032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
ATRX-213ENST00000624032 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
ATRX-213ENST00000624032 EZH2Q15910 746 aaKnown RBP14.12□□□□□ -0.15
ATRX-213ENST00000624032 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 DCTPP1Q9H773 170 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 EXOC6BQ9Y2D4 811 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 ANKRD36CQ5JPF3 1778 aa14.12□□□□□ -0.15
ATRX-213ENST00000624032 ZNF827Q17R98 1081 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 ANKRD45Q5TZF3 282 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 NARFQ9UHQ1 456 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
ATRX-213ENST00000624032 HMMRO75330 724 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 ZPR1O75312 459 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 TPM2P07951 284 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 DEFB132Q7Z7B7 95 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
ATRX-213ENST00000624032 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
ATRX-213ENST00000624032 BCORQ6W2J9 1755 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 RFC4P35249 363 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 POLA2Q14181 598 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 TBC1D9BQ66K14 1250 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms