RNA–Protein interactions for RNA: ENST00000622768.4

GRIA3-209, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene GRIA3, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-209ENST00000622768 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
GRIA3-209ENST00000622768 PNMA8AQ86V59 439 aaPredicted RBP11.14□□□□□ -0.63
GRIA3-209ENST00000622768 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
GRIA3-209ENST00000622768 LINS1Q8NG48 757 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 FEZ1Q99689 392 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 VEZTQ9HBM0 779 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 PPP1R12BO60237 982 aaPredicted RBP11.13□□□□□ -0.63
GRIA3-209ENST00000622768 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
GRIA3-209ENST00000622768 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 PICK1Q9NRD5 415 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 MAP3K15Q6ZN16 1313 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 FBLN1P23142 703 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 CSADQ9Y600 493 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 CNTNAP4Q9C0A0 1308 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
GRIA3-209ENST00000622768 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 BRIP1Q9BX63 1249 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 RSPH6AQ9H0K4 717 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 DLGAP5Q15398 846 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 CIAPIN1Q6FI81 312 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 SAMD1Q6SPF0 538 aaPredicted RBP11.12□□□□□ -0.63
GRIA3-209ENST00000622768 UBE3BQ7Z3V4 1068 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 RALYLQ86SE5 291 aaKnown RBP11.12□□□□□ -0.63
GRIA3-209ENST00000622768 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
GRIA3-209ENST00000622768 ZRSR1Q15695 479 aaKnown RBP11.12□□□□□ -0.63
GRIA3-209ENST00000622768 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
GRIA3-209ENST00000622768 TNS2Q63HR2 1409 aa11.11□□□□□ -0.63
GRIA3-209ENST00000622768 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
GRIA3-209ENST00000622768 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
GRIA3-209ENST00000622768 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
GRIA3-209ENST00000622768 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
GRIA3-209ENST00000622768 SRGAP3O43295 1099 aa11.11□□□□□ -0.63
GRIA3-209ENST00000622768 CNTROBQ8N137 903 aa11.11□□□□□ -0.63
GRIA3-209ENST00000622768 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
GRIA3-209ENST00000622768 KIAA1210Q9ULL0 1709 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 RPS8P62241 208 aaKnown RBP11.1□□□□□ -0.63
GRIA3-209ENST00000622768 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 WDR66Q8TBY9 1149 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 TSR2Q969E8 191 aaKnown RBP11.1□□□□□ -0.63
GRIA3-209ENST00000622768 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 COL15A1P39059 1388 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
GRIA3-209ENST00000622768 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 GLRX3O76003 335 aaKnown RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 A1BGP04217 495 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 ZKSCAN1P17029 563 aaPredicted RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 IL15P40933 162 aaPredicted RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 STYK1Q6J9G0 422 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 TMOD4Q9NZQ9 345 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 MMP14P50281 582 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 LMNB1P20700 586 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 ATRNO75882 1429 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 MPHOSPH10O00566 681 aaKnown RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 WWC2Q6AWC2 1192 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
GRIA3-209ENST00000622768 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
GRIA3-209ENST00000622768 BECN1Q14457 450 aa11.08□□□□□ -0.63
GRIA3-209ENST00000622768 SIL1Q9H173 461 aa11.08□□□□□ -0.63
GRIA3-209ENST00000622768 LGR6Q9HBX8 967 aa11.08□□□□□ -0.63
GRIA3-209ENST00000622768 ATG3Q9NT62 314 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
GRIA3-209ENST00000622768 RILPL2Q969X0 211 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 CRNKL1Q9BZJ0 848 aaKnown RBP11.08□□□□□ -0.64
GRIA3-209ENST00000622768 AS3MTQ9HBK9 375 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 WDR78Q5VTH9 848 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 XDHP47989 1333 aa11.08□□□□□ -0.64
GRIA3-209ENST00000622768 GRM8O00222 908 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 EHMT1Q9H9B1 1298 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 RGL2O15211 777 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 LDHBP07195 334 aaKnown RBP11.07□□□□□ -0.64
GRIA3-209ENST00000622768 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
GRIA3-209ENST00000622768 ANKRD45Q5TZF3 282 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 SMC1BQ8NDV3 1235 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 ZBTB1Q9Y2K1 713 aa11.07□□□□□ -0.64
GRIA3-209ENST00000622768 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
GRIA3-209ENST00000622768 XBP1P17861 261 aa11.06□□□□□ -0.64
GRIA3-209ENST00000622768 NOB1Q9ULX3 412 aaKnown RBP11.06□□□□□ -0.64
GRIA3-209ENST00000622768 MROH5Q6ZUA9 1318 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms