RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 LEKR1Q6ZMV7 388 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 ODF2Q5BJF6 829 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 F13A1P00488 732 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 KSR2Q6VAB6 950 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 Q6ZUG5 572 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 CWC15Q9P013 229 aaKnown RBP18.77■□□□□ 0.6
GABRB3-215ENST00000622697 SPATA31E1Q6ZUB1 1445 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 STX1AQ16623 288 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 ANO6Q4KMQ2 910 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 CHST3Q7LGC8 479 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
GABRB3-215ENST00000622697 DACT1Q9NYF0 836 aa18.77■□□□□ 0.59
GABRB3-215ENST00000622697 HMG20BQ9P0W2 317 aa18.77■□□□□ 0.59
GABRB3-215ENST00000622697 CAVIN4Q5BKX8 364 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 ZSCAN29Q8IWY8 852 aaPredicted RBP18.76■□□□□ 0.59
GABRB3-215ENST00000622697 ADAMTS2O95450 1211 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 SLC5A1P13866 664 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 UHRF1BP1LA0JNW5 1464 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
GABRB3-215ENST00000622697 BLMP54132 1417 aaPredicted RBP18.76■□□□□ 0.59
GABRB3-215ENST00000622697 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
GABRB3-215ENST00000622697 H0YHG0 523 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 CDR1P51861 262 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 HSP90AA4PQ58FG1 418 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 KLF18A0A0U1RQI7 1052 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
GABRB3-215ENST00000622697 KIAA1328Q86T90 577 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 IL13P35225 146 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 KDM6BO15054 1643 aa18.75■□□□□ 0.59
GABRB3-215ENST00000622697 SPDYE4A6NLX3 237 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 METAP2P50579 478 aaKnown RBP eCLIP18.74■□□□□ 0.59
GABRB3-215ENST00000622697 CCDC102AQ96A19 550 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 SLC26A6Q9BXS9 759 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 YTHDC2Q9H6S0 1430 aaKnown RBP18.74■□□□□ 0.59
GABRB3-215ENST00000622697 HSP90AB3PQ58FF7 597 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 UVSSAQ2YD98 709 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 ERLIN1O75477 346 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 CABLES1Q8TDN4 633 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 CENPHQ9H3R5 247 aa18.74■□□□□ 0.59
GABRB3-215ENST00000622697 FLT4P35916 1363 aa18.73■□□□□ 0.59
GABRB3-215ENST00000622697 NCOA7Q8NI08 942 aa18.73■□□□□ 0.59
GABRB3-215ENST00000622697 CTCFLQ8NI51 663 aaPredicted RBP18.73■□□□□ 0.59
GABRB3-215ENST00000622697 DNAJC25Q9H1X3 360 aa18.73■□□□□ 0.59
GABRB3-215ENST00000622697 RBM25P49756 843 aaKnown RBP18.72■□□□□ 0.59
GABRB3-215ENST00000622697 TMCO3Q6UWJ1 677 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 CCDC186Q7Z3E2 898 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 MCM5P33992 734 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 MCMDC2Q4G0Z9 681 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 IQCA1Q86XH1 822 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 IQSEC3Q9UPP2 1182 aaPredicted RBP18.72■□□□□ 0.59
GABRB3-215ENST00000622697 ZSCAN12O43309 604 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
GABRB3-215ENST00000622697 MPHOSPH10O00566 681 aaKnown RBP18.71■□□□□ 0.59
GABRB3-215ENST00000622697 CASQ1P31415 396 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 ANKIB1Q9P2G1 1089 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 NOLC1Q14978 699 aaKnown RBP eCLIP18.71■□□□□ 0.59
GABRB3-215ENST00000622697 CREB3L3Q68CJ9 461 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
GABRB3-215ENST00000622697 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 NLRP5P59047 1200 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 DZIP1Q86YF9 867 aaKnown RBP18.71■□□□□ 0.59
GABRB3-215ENST00000622697 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
GABRB3-215ENST00000622697 ZFYVE9O95405 1425 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 PDCL3Q9H2J4 239 aa18.71■□□□□ 0.59
GABRB3-215ENST00000622697 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
GABRB3-215ENST00000622697 KIF4BQ2VIQ3 1234 aa18.71■□□□□ 0.58
GABRB3-215ENST00000622697 ZSCAN16Q9H4T2 348 aaPredicted RBP18.71■□□□□ 0.58
GABRB3-215ENST00000622697 BMP2KQ9NSY1 1161 aaPredicted RBP18.7■□□□□ 0.58
GABRB3-215ENST00000622697 SYCP1Q15431 976 aa18.7■□□□□ 0.58
GABRB3-215ENST00000622697 MARCKSP29966 332 aaPredicted RBP18.7■□□□□ 0.58
GABRB3-215ENST00000622697 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
GABRB3-215ENST00000622697 TSPYL1Q9H0U9 437 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
GABRB3-215ENST00000622697 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 KIF2AO00139 706 aaPredicted RBP18.69■□□□□ 0.58
GABRB3-215ENST00000622697 HOXC9P31274 260 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 TFCP2Q12800 502 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 LINS1Q8NG48 757 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 EIF3JO75822 258 aaKnown RBP18.69■□□□□ 0.58
GABRB3-215ENST00000622697 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 ENOX2Q16206 610 aaKnown RBP18.69■□□□□ 0.58
GABRB3-215ENST00000622697 ZKSCAN5Q9Y2L8 839 aa18.69■□□□□ 0.58
GABRB3-215ENST00000622697 APOBRQ0VD83 1088 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 KLHDC4Q8TBB5 520 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 FAM200AQ8TCP9 573 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 NUP88Q99567 741 aaPredicted RBP18.68■□□□□ 0.58
GABRB3-215ENST00000622697 PTPRTO14522 1441 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 PNMA6EA0A0J9YXQ4 647 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms