RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CCDC34Q96HJ3 373 aa10.89□□□□□ -0.67
HDAC9-229ENST00000622668 PDE8AO60658 829 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 GIGYF1O75420 1035 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-229ENST00000622668 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-229ENST00000622668 CCDC191Q8NCU4 936 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 SLKQ9H2G2 1235 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-229ENST00000622668 CLTCL1P53675 1640 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 RPS8P62241 208 aaKnown RBP10.88□□□□□ -0.67
HDAC9-229ENST00000622668 DALRD3Q5D0E6 543 aaKnown RBP10.88□□□□□ -0.67
HDAC9-229ENST00000622668 CWC27Q6UX04 472 aaKnown RBP10.88□□□□□ -0.67
HDAC9-229ENST00000622668 PIBF1Q8WXW3 757 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 ATP7BP35670 1465 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 ITGA6P23229 1130 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 IGSF1Q8N6C5 1336 aa10.88□□□□□ -0.67
HDAC9-229ENST00000622668 CRB1P82279 1406 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 G2E3Q7L622 706 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 PA2G4Q9UQ80 394 aaKnown RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 MARCH10Q8NA82 808 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 RTL1A6NKG5 1358 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 VAMP4O75379 141 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 TCIRG1Q13488 830 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 METTL22Q9BUU2 404 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 PTCH1Q13635 1447 aa10.87□□□□□ -0.67
HDAC9-229ENST00000622668 RANBP6O60518 1105 aaKnown RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
HDAC9-229ENST00000622668 CHL1O00533 1208 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 UQCRFS1P1P0C7P4 283 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 SPATA31A5Q5VU36 1347 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 SPATA31A7Q8IWB4 1347 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 RAB11FIP3O75154 756 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-229ENST00000622668 SLC27A3Q5K4L6 730 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 PIK3C2BO00750 1634 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 CDC45O75419 566 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 TAF5LO75529 589 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 RPS6KA4O75676 772 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
HDAC9-229ENST00000622668 HOXB7P09629 217 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 CYP7A1P22680 504 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 NAA16Q6N069 864 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-229ENST00000622668 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 PIM2Q9P1W9 311 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 TNNI2P48788 182 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 GSTO1P78417 241 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 TTLL6Q8N841 843 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 BABAM1Q9NWV8 329 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 BIN2Q9UBW5 565 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-229ENST00000622668 LMTK2Q8IWU2 1503 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 PTPRUQ92729 1446 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 CTNNA3Q9UI47 895 aa10.85□□□□□ -0.67
HDAC9-229ENST00000622668 PPRC1Q5VV67 1664 aaKnown RBP10.84□□□□□ -0.67
HDAC9-229ENST00000622668 OVOS2A0A0G2JMS6 1433 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 OVOS2A0A0J9YW53 1432 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 OVOS2Q6IE36 1432 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 ZNF594Q96JF6 807 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-229ENST00000622668 LDHBP07195 334 aaKnown RBP10.84□□□□□ -0.67
HDAC9-229ENST00000622668 XBP1P17861 261 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-229ENST00000622668 MX1P20591 662 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 HIBADHP31937 336 aaKnown RBP10.84□□□□□ -0.67
HDAC9-229ENST00000622668 PNPLA6Q8IY17 1366 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 C21orf2O43822 256 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 ERFEQ4G0M1 354 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 SOGA3Q5TF21 947 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
HDAC9-229ENST00000622668 PSMA5P28066 241 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 TTF1Q15361 905 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-229ENST00000622668 PRAMEF22A3QJZ6 481 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 CHD1LQ86WJ1 897 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 CCDC125Q86Z20 511 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 BICC1Q9H694 974 aaKnown RBP10.83□□□□□ -0.68
HDAC9-229ENST00000622668 ECHDC1Q9NTX5 307 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 MAP3K15Q6ZN16 1313 aa10.83□□□□□ -0.68
HDAC9-229ENST00000622668 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-229ENST00000622668 GTF2IP78347 998 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 DLGAP5Q15398 846 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 KLHDC4Q8TBB5 520 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
HDAC9-229ENST00000622668 CRNKL1Q9BZJ0 848 aaKnown RBP10.82□□□□□ -0.68
HDAC9-229ENST00000622668 BRMS1Q9HCU9 246 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 NPC1L1Q9UHC9 1359 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
HDAC9-229ENST00000622668 STX8Q9UNK0 236 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 BARGINQ6ZT62 677 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 SULF1Q8IWU6 871 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 MRPL50Q8N5N7 158 aaKnown RBP10.82□□□□□ -0.68
HDAC9-229ENST00000622668 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
HDAC9-229ENST00000622668 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms