RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 ALDH1B1P30837 517 aa25.12■■□□□ 1.61
LTBP4-239ENST00000622565 PPP1R42Q7Z4L9 355 aa25.12■■□□□ 1.61
LTBP4-239ENST00000622565 ANKRD36CQ5JPF3 1778 aa25.11■■□□□ 1.61
LTBP4-239ENST00000622565 HOXA10P31260 410 aaPredicted RBP25.11■■□□□ 1.61
LTBP4-239ENST00000622565 GNAI1P63096 354 aa25.11■■□□□ 1.61
LTBP4-239ENST00000622565 NLRP10Q86W26 655 aa25.11■■□□□ 1.61
LTBP4-239ENST00000622565 SYNE4Q8N205 404 aa25.11■■□□□ 1.61
LTBP4-239ENST00000622565 ZNF428Q96B54 188 aa25.11■■□□□ 1.61
LTBP4-239ENST00000622565 UTP14AQ9BVJ6 771 aaKnown RBP25.11■■□□□ 1.61
LTBP4-239ENST00000622565 POTECB2RU33 542 aa25.1■■□□□ 1.61
LTBP4-239ENST00000622565 ELL2O00472 640 aaPredicted RBP25.1■■□□□ 1.61
LTBP4-239ENST00000622565 TCIRG1Q13488 830 aa25.1■■□□□ 1.61
LTBP4-239ENST00000622565 C8orf58Q8NAV2 365 aa25.1■■□□□ 1.61
LTBP4-239ENST00000622565 DBF4Q9UBU7 674 aaPredicted RBP25.1■■□□□ 1.61
LTBP4-239ENST00000622565 FKBP4Q02790 459 aaKnown RBP eCLIP25.09■■□□□ 1.61
LTBP4-239ENST00000622565 SLC10A5Q5PT55 438 aa25.09■■□□□ 1.61
LTBP4-239ENST00000622565 RBM46Q8TBY0 533 aaKnown RBP25.09■■□□□ 1.61
LTBP4-239ENST00000622565 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
LTBP4-239ENST00000622565 DICER1Q9UPY3 1922 aaKnown RBP25.09■■□□□ 1.61
LTBP4-239ENST00000622565 CALD1Q05682 793 aaKnown RBP25.08■■□□□ 1.61
LTBP4-239ENST00000622565 RPGRQ92834 1020 aaKnown RBP25.08■■□□□ 1.61
LTBP4-239ENST00000622565 ZNF277Q9NRM2 450 aaPredicted RBP25.08■■□□□ 1.61
LTBP4-239ENST00000622565 ANP32CO43423 234 aa25.07■■□□□ 1.6
LTBP4-239ENST00000622565 HSP90AB3PQ58FF7 597 aa25.07■■□□□ 1.6
LTBP4-239ENST00000622565 C16orf71Q8IYS4 520 aaPredicted RBP25.07■■□□□ 1.6
LTBP4-239ENST00000622565 PLBD2Q8NHP8 589 aa25.07■■□□□ 1.6
LTBP4-239ENST00000622565 CEP350Q5VT06 3117 aa25.06■■□□□ 1.6
LTBP4-239ENST00000622565 ANKRD13DQ6ZTN6 518 aa25.06■■□□□ 1.6
LTBP4-239ENST00000622565 WDR90Q96KV7 1748 aa25.06■■□□□ 1.6
LTBP4-239ENST00000622565 HCLS1P14317 486 aaPredicted RBP25.05■■□□□ 1.6
LTBP4-239ENST00000622565 RTKN2Q8IZC4 609 aa25.05■■□□□ 1.6
LTBP4-239ENST00000622565 TSPYL6Q8N831 410 aa25.05■■□□□ 1.6
LTBP4-239ENST00000622565 NLRP3Q96P20 1036 aa25.05■■□□□ 1.6
LTBP4-239ENST00000622565 CRAMP1Q96RY5 1269 aa25.05■■□□□ 1.6
LTBP4-239ENST00000622565 PHAXQ9H814 394 aaKnown RBP25.05■■□□□ 1.6
LTBP4-239ENST00000622565 HYPKQ9NX55 129 aa25.05■■□□□ 1.6
LTBP4-239ENST00000622565 DDNO94850 711 aaPredicted RBP25.04■■□□□ 1.6
LTBP4-239ENST00000622565 VEGFAP15692 232 aaPredicted RBP25.04■■□□□ 1.6
LTBP4-239ENST00000622565 DPY19L2Q6NUT2 758 aa25.04■■□□□ 1.6
LTBP4-239ENST00000622565 WWC1Q8IX03 1113 aa25.04■■□□□ 1.6
LTBP4-239ENST00000622565 TSR2Q969E8 191 aaKnown RBP25.04■■□□□ 1.6
LTBP4-239ENST00000622565 RBM17Q96I25 401 aaKnown RBP25.04■■□□□ 1.6
LTBP4-239ENST00000622565 ISCA1Q9BUE6 129 aa25.04■■□□□ 1.6
LTBP4-239ENST00000622565 TRMT112Q9UI30 125 aaKnown RBP25.04■■□□□ 1.6
LTBP4-239ENST00000622565 ATP5J2-PTCD1G3V325 749 aa25.03■■□□□ 1.6
LTBP4-239ENST00000622565 TCERG1O14776 1098 aaKnown RBP25.03■■□□□ 1.6
LTBP4-239ENST00000622565 CCDC27Q2M243 656 aa25.03■■□□□ 1.6
LTBP4-239ENST00000622565 RNF123Q5XPI4 1314 aa25.03■■□□□ 1.6
LTBP4-239ENST00000622565 LAMB2P55268 1798 aa25.03■■□□□ 1.6
LTBP4-239ENST00000622565 COL4A5P29400 1685 aa25.02■■□□□ 1.6
LTBP4-239ENST00000622565 PPEF1O14829 653 aaPredicted RBP25.01■■□□□ 1.59
LTBP4-239ENST00000622565 FSTL1Q12841 308 aa25.01■■□□□ 1.59
LTBP4-239ENST00000622565 ABCC4O15439 1325 aa25.01■■□□□ 1.59
LTBP4-239ENST00000622565 ZNF541Q9H0D2 1346 aa25.01■■□□□ 1.59
LTBP4-239ENST00000622565 IARSP41252 1262 aaKnown RBP25■■□□□ 1.59
LTBP4-239ENST00000622565 PSMD1Q99460 953 aa25■■□□□ 1.59
LTBP4-239ENST00000622565 SH3TC1Q8TE82 1336 aa25■■□□□ 1.59
LTBP4-239ENST00000622565 DDX60Q8IY21 1712 aaKnown RBP24.98■■□□□ 1.59
LTBP4-239ENST00000622565 APLP1P51693 650 aa24.98■■□□□ 1.59
LTBP4-239ENST00000622565 CC2D2BQ6DHV5 1058 aa24.98■■□□□ 1.59
LTBP4-239ENST00000622565 FAM89AQ96GI7 184 aa24.98■■□□□ 1.59
LTBP4-239ENST00000622565 HTRA3P83110 453 aa24.97■■□□□ 1.59
LTBP4-239ENST00000622565 SMC1BQ8NDV3 1235 aa24.97■■□□□ 1.59
LTBP4-239ENST00000622565 RIC3Q7Z5B4 369 aa24.96■■□□□ 1.59
LTBP4-239ENST00000622565 SALL2Q9Y467 1007 aaPredicted RBP24.96■■□□□ 1.59
LTBP4-239ENST00000622565 ATP6V0A2Q9Y487 856 aa24.96■■□□□ 1.59
LTBP4-239ENST00000622565 COL4A1P02462 1669 aa24.95■■□□□ 1.58
LTBP4-239ENST00000622565 FZD9O00144 591 aa24.95■■□□□ 1.58
LTBP4-239ENST00000622565 POTEIP0CG38 1075 aa24.95■■□□□ 1.58
LTBP4-239ENST00000622565 POTEJP0CG39 1038 aa24.95■■□□□ 1.58
LTBP4-239ENST00000622565 TRIM28Q13263 835 aaKnown RBP24.95■■□□□ 1.58
LTBP4-239ENST00000622565 RTL5Q5HYW3 569 aaPredicted RBP24.95■■□□□ 1.58
LTBP4-239ENST00000622565 DNAJC5GQ8N7S2 189 aa24.95■■□□□ 1.58
LTBP4-239ENST00000622565 GOLGA2Q08379 1002 aa24.94■■□□□ 1.58
LTBP4-239ENST00000622565 NCBP3Q53F19 620 aaKnown RBP24.94■■□□□ 1.58
LTBP4-239ENST00000622565 CCDC30Q5VVM6 783 aa24.94■■□□□ 1.58
LTBP4-239ENST00000622565 IL16Q14005 1332 aa24.93■■□□□ 1.58
LTBP4-239ENST00000622565 L3MBTL3Q96JM7 780 aaPredicted RBP24.93■■□□□ 1.58
LTBP4-239ENST00000622565 MYD88Q99836 296 aa24.93■■□□□ 1.58
LTBP4-239ENST00000622565 BBOX1O75936 387 aa24.91■■□□□ 1.58
LTBP4-239ENST00000622565 GRAPQ13588 217 aa24.91■■□□□ 1.58
LTBP4-239ENST00000622565 TWISTNBQ3B726 338 aaPredicted RBP24.91■■□□□ 1.58
LTBP4-239ENST00000622565 GRIPAP1Q4V328 841 aa24.91■■□□□ 1.58
LTBP4-239ENST00000622565 DDX46Q7L014 1031 aaKnown RBP24.91■■□□□ 1.58
LTBP4-239ENST00000622565 GRAPLQ8TC17 118 aaPredicted RBP24.91■■□□□ 1.58
LTBP4-239ENST00000622565 TAF1P21675 1872 aa24.91■■□□□ 1.58
LTBP4-239ENST00000622565 FANCIQ9NVI1 1328 aa24.9■■□□□ 1.58
LTBP4-239ENST00000622565 SF3B3Q15393 1217 aaKnown RBP24.9■■□□□ 1.58
LTBP4-239ENST00000622565 G2E3Q7L622 706 aa24.9■■□□□ 1.58
LTBP4-239ENST00000622565 SP8Q8IXZ3 490 aa24.9■■□□□ 1.58
LTBP4-239ENST00000622565 FAM9BQ8IZU0 186 aa24.9■■□□□ 1.58
LTBP4-239ENST00000622565 IRS4O14654 1257 aaPredicted RBP24.89■■□□□ 1.58
LTBP4-239ENST00000622565 JDP2Q8WYK2 163 aa24.89■■□□□ 1.58
LTBP4-239ENST00000622565 JARID2Q92833 1246 aaPredicted RBP24.89■■□□□ 1.58
LTBP4-239ENST00000622565 METTL22Q9BUU2 404 aaPredicted RBP24.89■■□□□ 1.58
LTBP4-239ENST00000622565 TAF1DQ9H5J8 278 aaPredicted RBP24.89■■□□□ 1.58
LTBP4-239ENST00000622565 SPINK5Q9NQ38 1064 aaPredicted RBP24.89■■□□□ 1.58
LTBP4-239ENST00000622565 AOC3Q16853 763 aa24.88■■□□□ 1.57
LTBP4-239ENST00000622565 LARGE2Q8N3Y3 721 aa24.88■■□□□ 1.57
LTBP4-239ENST00000622565 CELF1Q92879 486 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms