RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 H7C1W4 665 aa16.95■□□□□ 0.3
EPB42-210ENST00000622454 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
EPB42-210ENST00000622454 TJP1Q07157 1748 aa16.95■□□□□ 0.3
EPB42-210ENST00000622454 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
EPB42-210ENST00000622454 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
EPB42-210ENST00000622454 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
EPB42-210ENST00000622454 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
EPB42-210ENST00000622454 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
EPB42-210ENST00000622454 KAT6BQ8WYB5 2073 aa16.94■□□□□ 0.3
EPB42-210ENST00000622454 EXOC5O00471 708 aa16.93■□□□□ 0.3
EPB42-210ENST00000622454 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
EPB42-210ENST00000622454 PIGBQ92521 554 aa16.93■□□□□ 0.3
EPB42-210ENST00000622454 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
EPB42-210ENST00000622454 ZBTB3Q9H5J0 574 aa16.93■□□□□ 0.3
EPB42-210ENST00000622454 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
EPB42-210ENST00000622454 NUCB2P80303 420 aa16.93■□□□□ 0.3
EPB42-210ENST00000622454 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
EPB42-210ENST00000622454 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 HIP1O00291 1037 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 LMBR1LQ6UX01 489 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 ASAP1Q9ULH1 1129 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 TRAK2O60296 914 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 FOXO4P98177 505 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 CLEC17AQ6ZS10 378 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 TMX3Q96JJ7 454 aa16.92■□□□□ 0.3
EPB42-210ENST00000622454 LRP6O75581 1613 aa16.91■□□□□ 0.3
EPB42-210ENST00000622454 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
EPB42-210ENST00000622454 SSFA2P28290 1259 aa16.91■□□□□ 0.3
EPB42-210ENST00000622454 PTMSP20962 102 aa16.9■□□□□ 0.3
EPB42-210ENST00000622454 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
EPB42-210ENST00000622454 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
EPB42-210ENST00000622454 STARD3NLO95772 234 aa16.9■□□□□ 0.3
EPB42-210ENST00000622454 TFCP2Q12800 502 aa16.9■□□□□ 0.3
EPB42-210ENST00000622454 TNNI3KQ59H18 835 aa16.9■□□□□ 0.3
EPB42-210ENST00000622454 FPGT-TNNI3KV9GXZ4 949 aa16.9■□□□□ 0.3
EPB42-210ENST00000622454 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
EPB42-210ENST00000622454 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
EPB42-210ENST00000622454 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
EPB42-210ENST00000622454 BCL9O00512 1426 aa16.89■□□□□ 0.29
EPB42-210ENST00000622454 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
EPB42-210ENST00000622454 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.29
EPB42-210ENST00000622454 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
EPB42-210ENST00000622454 SNX14Q9Y5W7 946 aa16.89■□□□□ 0.29
EPB42-210ENST00000622454 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
EPB42-210ENST00000622454 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
EPB42-210ENST00000622454 CDCA7Q9BWT1 371 aaPredicted RBP16.88■□□□□ 0.29
EPB42-210ENST00000622454 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
EPB42-210ENST00000622454 NWD2Q9ULI1 1742 aa16.88■□□□□ 0.29
EPB42-210ENST00000622454 ATP5JP18859 108 aa16.88■□□□□ 0.29
EPB42-210ENST00000622454 TCIRG1Q13488 830 aa16.88■□□□□ 0.29
EPB42-210ENST00000622454 CUL4AQ13619 759 aa16.88■□□□□ 0.29
EPB42-210ENST00000622454 ISCA1Q9BUE6 129 aa16.88■□□□□ 0.29
EPB42-210ENST00000622454 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
EPB42-210ENST00000622454 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 DDB1Q16531 1140 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 KIF6Q6ZMV9 814 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
EPB42-210ENST00000622454 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 SLIT2O94813 1529 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
EPB42-210ENST00000622454 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
EPB42-210ENST00000622454 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
EPB42-210ENST00000622454 PTH1RQ03431 593 aa16.86■□□□□ 0.29
EPB42-210ENST00000622454 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
EPB42-210ENST00000622454 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
EPB42-210ENST00000622454 C8orf37Q96NL8 207 aa16.86■□□□□ 0.29
EPB42-210ENST00000622454 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
EPB42-210ENST00000622454 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
EPB42-210ENST00000622454 JCADQ9P266 1359 aa16.85■□□□□ 0.29
EPB42-210ENST00000622454 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
EPB42-210ENST00000622454 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
EPB42-210ENST00000622454 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
EPB42-210ENST00000622454 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
EPB42-210ENST00000622454 PKP1Q13835 747 aa16.85■□□□□ 0.29
EPB42-210ENST00000622454 ATG9AQ7Z3C6 839 aa16.85■□□□□ 0.29
EPB42-210ENST00000622454 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
EPB42-210ENST00000622454 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
EPB42-210ENST00000622454 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
EPB42-210ENST00000622454 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
EPB42-210ENST00000622454 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
EPB42-210ENST00000622454 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
EPB42-210ENST00000622454 KCNB2Q92953 911 aa16.84■□□□□ 0.29
EPB42-210ENST00000622454 DBNDD2Q9BQY9 259 aa16.84■□□□□ 0.29
EPB42-210ENST00000622454 A0A0G2JS52 829 aa16.83■□□□□ 0.28
EPB42-210ENST00000622454 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
EPB42-210ENST00000622454 NECTIN1Q15223 517 aa16.83■□□□□ 0.28
EPB42-210ENST00000622454 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
EPB42-210ENST00000622454 TTC14Q96N46 770 aa16.83■□□□□ 0.28
EPB42-210ENST00000622454 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
EPB42-210ENST00000622454 ANKRD36CQ5JPF3 1778 aa16.83■□□□□ 0.28
EPB42-210ENST00000622454 A0A0D9SFI3 127 aa16.82■□□□□ 0.28
EPB42-210ENST00000622454 CIAO1O76071 339 aa16.82■□□□□ 0.28
EPB42-210ENST00000622454 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
EPB42-210ENST00000622454 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
EPB42-210ENST00000622454 PRPF40BQ6NWY9 871 aaKnown RBP16.82■□□□□ 0.28
EPB42-210ENST00000622454 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
EPB42-210ENST00000622454 RFX7Q2KHR2 1363 aa16.82■□□□□ 0.28
EPB42-210ENST00000622454 EYA2O00167 538 aa16.82■□□□□ 0.28
EPB42-210ENST00000622454 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms