RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 PDE6BP35913 854 aa17.2■□□□□ 0.34
MECP2-213ENST00000622433 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
MECP2-213ENST00000622433 ABCC12Q96J65 1359 aa17.19■□□□□ 0.34
MECP2-213ENST00000622433 KLRG2A4D1S0 409 aaPredicted RBP17.19■□□□□ 0.34
MECP2-213ENST00000622433 IGKV5-2P06315 115 aa17.19■□□□□ 0.34
MECP2-213ENST00000622433 ERFEQ4G0M1 354 aa17.19■□□□□ 0.34
MECP2-213ENST00000622433 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
MECP2-213ENST00000622433 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
MECP2-213ENST00000622433 DPEP1P16444 411 aa17.18■□□□□ 0.34
MECP2-213ENST00000622433 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
MECP2-213ENST00000622433 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
MECP2-213ENST00000622433 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
MECP2-213ENST00000622433 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
MECP2-213ENST00000622433 SH3TC1Q8TE82 1336 aa17.18■□□□□ 0.34
MECP2-213ENST00000622433 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
MECP2-213ENST00000622433 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
MECP2-213ENST00000622433 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
MECP2-213ENST00000622433 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
MECP2-213ENST00000622433 F6X3S4 739 aa17.17■□□□□ 0.34
MECP2-213ENST00000622433 KCNA3P22001 575 aa17.17■□□□□ 0.34
MECP2-213ENST00000622433 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
MECP2-213ENST00000622433 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
MECP2-213ENST00000622433 H0YIN7 160 aa17.16■□□□□ 0.34
MECP2-213ENST00000622433 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
MECP2-213ENST00000622433 BEND3Q5T5X7 828 aa17.16■□□□□ 0.34
MECP2-213ENST00000622433 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
MECP2-213ENST00000622433 ZBTB38Q8NAP3 1195 aaPredicted RBP17.16■□□□□ 0.34
MECP2-213ENST00000622433 ARHGAP45Q92619 1136 aa17.16■□□□□ 0.34
MECP2-213ENST00000622433 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
MECP2-213ENST00000622433 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
MECP2-213ENST00000622433 CHRNA5P30532 468 aa17.15■□□□□ 0.34
MECP2-213ENST00000622433 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
MECP2-213ENST00000622433 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
MECP2-213ENST00000622433 ALDH1L1O75891 902 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 SRGNP10124 158 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 GCKRQ14397 625 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 CRY2Q49AN0 593 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
MECP2-213ENST00000622433 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
MECP2-213ENST00000622433 LAMB2P55268 1798 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
MECP2-213ENST00000622433 BCAR3O75815 825 aa17.13■□□□□ 0.33
MECP2-213ENST00000622433 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
MECP2-213ENST00000622433 STYK1Q6J9G0 422 aa17.13■□□□□ 0.33
MECP2-213ENST00000622433 SYNE4Q8N205 404 aa17.13■□□□□ 0.33
MECP2-213ENST00000622433 FAM89AQ96GI7 184 aa17.13■□□□□ 0.33
MECP2-213ENST00000622433 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
MECP2-213ENST00000622433 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
MECP2-213ENST00000622433 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
MECP2-213ENST00000622433 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
MECP2-213ENST00000622433 NPR1P16066 1061 aa17.12■□□□□ 0.33
MECP2-213ENST00000622433 SLC4A10Q6U841 1118 aa17.12■□□□□ 0.33
MECP2-213ENST00000622433 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
MECP2-213ENST00000622433 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
MECP2-213ENST00000622433 H7C1W4 665 aa17.11■□□□□ 0.33
MECP2-213ENST00000622433 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
MECP2-213ENST00000622433 HCLS1P14317 486 aaPredicted RBP17.11■□□□□ 0.33
MECP2-213ENST00000622433 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
MECP2-213ENST00000622433 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
MECP2-213ENST00000622433 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
MECP2-213ENST00000622433 GPR162Q16538 588 aa17.1■□□□□ 0.33
MECP2-213ENST00000622433 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
MECP2-213ENST00000622433 TTLL6Q8N841 843 aa17.1■□□□□ 0.33
MECP2-213ENST00000622433 YBX3P16989 372 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■□□□□ 10
MECP2-213ENST00000622433 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
MECP2-213ENST00000622433 CASP7P55210 303 aa17.09■□□□□ 0.33
MECP2-213ENST00000622433 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
MECP2-213ENST00000622433 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
MECP2-213ENST00000622433 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.336e-14■□□□□ 8.7
MECP2-213ENST00000622433 ABCC4O15439 1325 aa17.09■□□□□ 0.33
MECP2-213ENST00000622433 ARFGEF1Q9Y6D6 1849 aa17.08■□□□□ 0.33
MECP2-213ENST00000622433 GRIN3BO60391 1043 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 PDE8AO60658 829 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 TRIM27P14373 513 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 ALDH1B1P30837 517 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
MECP2-213ENST00000622433 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.32
MECP2-213ENST00000622433 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
MECP2-213ENST00000622433 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 BCS1LQ9Y276 419 aa17.08■□□□□ 0.32
MECP2-213ENST00000622433 UTYO14607 1347 aa17.07■□□□□ 0.32
MECP2-213ENST00000622433 GRM8O00222 908 aa17.07■□□□□ 0.32
MECP2-213ENST00000622433 PELP1Q8IZL8 1130 aaKnown RBP17.07■□□□□ 0.32
MECP2-213ENST00000622433 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
MECP2-213ENST00000622433 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
MECP2-213ENST00000622433 INTS3Q68E01 1043 aaKnown RBP17.06■□□□□ 0.32
MECP2-213ENST00000622433 C9orf78Q9NZ63 289 aaPredicted RBP17.06■□□□□ 0.32
MECP2-213ENST00000622433 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
MECP2-213ENST00000622433 CTSWP56202 376 aa17.05■□□□□ 0.32
MECP2-213ENST00000622433 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
MECP2-213ENST00000622433 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
MECP2-213ENST00000622433 CCDC152Q4G0S7 254 aa17.04■□□□□ 0.32
MECP2-213ENST00000622433 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
MECP2-213ENST00000622433 SLX4Q8IY92 1834 aa17.03■□□□□ 0.32
MECP2-213ENST00000622433 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms