RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	ZEB1	P37275	1124 aa	Predicted RBP	5.81	□□□□□ -1.48
LINC00649-219	ENST00000622171	BRIP1	Q9BX63	1249 aa		5.81	□□□□□ -1.48
LINC00649-219	ENST00000622171	PNN	Q9H307	717 aa	Known RBP	5.81	□□□□□ -1.48
LINC00649-219	ENST00000622171	LRRC37A	A6NMS7	1700 aa		5.81	□□□□□ -1.48
LINC00649-219	ENST00000622171	DUOX1	Q9NRD9	1551 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	DDN	O94850	711 aa	Predicted RBP	5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	LMNB1	P20700	586 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	GIGYF2	Q6Y7W6	1299 aa	Known RBP	5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	G2E3	Q7L622	706 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	NLRP10	Q86W26	655 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	RPGR	Q92834	1020 aa	Known RBP	5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	FAM89A	Q96GI7	184 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	MASTL	Q96GX5	879 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	MYD88	Q99836	296 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	TAOK3	Q9H2K8	898 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	SPINK5	Q9NQ38	1064 aa	Predicted RBP	5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	TRMT112	Q9UI30	125 aa	Known RBP	5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	CACNA1F	O60840	1977 aa		5.8	□□□□□ -1.48
LINC00649-219	ENST00000622171	ABCC4	O15439	1325 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	RNF123	Q5XPI4	1314 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	PPEF1	O14829	653 aa	Predicted RBP	5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	NPR1	P16066	1061 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	CCDC93	Q567U6	631 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	STYK1	Q6J9G0	422 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	TPTE2	Q6XPS3	522 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	ZNF34	Q8IZ26	560 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	CNKSR1	Q969H4	720 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	CFAP44	Q96MT7	982 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	UTP14A	Q9BVJ6	771 aa	Known RBP	5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	GJA3	Q9Y6H8	435 aa		5.79	□□□□□ -1.48
LINC00649-219	ENST00000622171	SCN4A	P35499	1836 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	FANCI	Q9NVI1	1328 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	ADAMTSL1	Q8N6G6	1762 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	SHTN1	A0MZ66	631 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	ERVV-1	B6SEH8	477 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	ZNF853	P0CG23	659 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	GNAI1	P63096	354 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	FMR1	Q06787	632 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	AOC3	Q16853	763 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	CWF19L2	Q2TBE0	894 aa	Known RBP	5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	RIC1	Q4ADV7	1423 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	EAPP	Q56P03	285 aa	Predicted RBP	5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	CLEC4G	Q6UXB4	293 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	RIC3	Q7Z5B4	369 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	WWC1	Q8IX03	1113 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	NYX	Q9GZU5	481 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	SEC31B	Q9NQW1	1179 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	IFT57	Q9NWB7	429 aa		5.78	□□□□□ -1.48
LINC00649-219	ENST00000622171	KDM2B	Q8NHM5	1336 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	TRPM7	Q96QT4	1865 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	SNED1	Q8TER0	1413 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	ZNF646	O15015	1829 aa	Predicted RBP	5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	WTIP	A6NIX2	430 aa	Predicted RBP	5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	POTEC	B2RU33	542 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171		F6X3S4	739 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	RIMBP2	O15034	1052 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	HSPA6	P17066	643 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	FKBP4	Q02790	459 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	EXOSC9	Q06265	439 aa	Known RBP	5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	GOLGA2	Q08379	1002 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	TCIRG1	Q13488	830 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	C7orf43	Q8WVR3	580 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	CELF1	Q92879	486 aa	Known RBP	5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	BCL2L13	Q9BXK5	485 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	MAP3K2	Q9Y2U5	619 aa		5.77	□□□□□ -1.49
LINC00649-219	ENST00000622171	ERBB4	Q15303	1308 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	SH3TC1	Q8TE82	1336 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	PSME4	Q14997	1843 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	GLTPD2	A6NH11	291 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	PPIP5K2	O43314	1243 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	IARS	P41252	1262 aa	Known RBP	5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	TWISTNB	Q3B726	338 aa	Predicted RBP	5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	CRY2	Q49AN0	593 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	PARP10	Q53GL7	1025 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	DLK2	Q6UY11	383 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	ANKRD13D	Q6ZTN6	518 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	PPP1R42	Q7Z4L9	355 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	LARGE2	Q8N3Y3	721 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	PLBD2	Q8NHP8	589 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	RBM17	Q96I25	401 aa	Known RBP	5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	NLRP3	Q96P20	1036 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	DBF4	Q9UBU7	674 aa	Predicted RBP	5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	MYH13	Q9UKX3	1938 aa		5.76	□□□□□ -1.49
LINC00649-219	ENST00000622171	KLRG2	A4D1S0	409 aa	Predicted RBP	5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	PI4KAP2	A4QPH2	592 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	IRS4	O14654	1257 aa	Predicted RBP	5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	RAD17	O75943	681 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	TOMM70	O94826	608 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	IGKV5-2	P06315	115 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	GRM1	Q13255	1194 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	DOK7	Q18PE1	504 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	UBE3B	Q7Z3V4	1068 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	PI4KAP1	Q8N8J0	262 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	ISCA1	Q9BUE6	129 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	DBNDD1	Q9H9R9	158 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	KCNQ5	Q9NR82	932 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	HYPK	Q9NX55	129 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms