RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 TXNRD1Q16881 649 aa19.79■□□□□ 0.76
CBWD3-216ENST00000621396 CHMP3Q9Y3E7 222 aa19.79■□□□□ 0.76
CBWD3-216ENST00000621396 ERVV-1B6SEH8 477 aa19.78■□□□□ 0.76
CBWD3-216ENST00000621396 SIL1Q9H173 461 aa19.78■□□□□ 0.76
CBWD3-216ENST00000621396 RTCBQ9Y3I0 505 aaKnown RBP19.78■□□□□ 0.76
CBWD3-216ENST00000621396 RPS6KA4O75676 772 aa19.78■□□□□ 0.76
CBWD3-216ENST00000621396 POLA2Q14181 598 aa19.78■□□□□ 0.76
CBWD3-216ENST00000621396 USPL1Q5W0Q7 1092 aa19.78■□□□□ 0.76
CBWD3-216ENST00000621396 ARHGEF1Q92888 912 aaKnown RBP19.78■□□□□ 0.76
CBWD3-216ENST00000621396 AK7Q96M32 723 aa19.78■□□□□ 0.76
CBWD3-216ENST00000621396 LMBR1LQ6UX01 489 aa19.77■□□□□ 0.76
CBWD3-216ENST00000621396 TSHZ2Q9NRE2 1034 aa19.77■□□□□ 0.76
CBWD3-216ENST00000621396 NIP7Q9Y221 180 aaKnown RBP eCLIP19.77■□□□□ 0.76
CBWD3-216ENST00000621396 LY75O60449 1722 aa19.77■□□□□ 0.76
CBWD3-216ENST00000621396 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.76
CBWD3-216ENST00000621396 TRMT112Q9UI30 125 aaKnown RBP19.77■□□□□ 0.76
CBWD3-216ENST00000621396 FOXO4P98177 505 aa19.76■□□□□ 0.75
CBWD3-216ENST00000621396 RC3H1Q5TC82 1133 aaKnown RBP19.76■□□□□ 0.75
CBWD3-216ENST00000621396 SUSD4Q5VX71 490 aa19.76■□□□□ 0.75
CBWD3-216ENST00000621396 ZNF34Q8IZ26 560 aa19.76■□□□□ 0.75
CBWD3-216ENST00000621396 TRIM28Q13263 835 aaKnown RBP19.75■□□□□ 0.75
CBWD3-216ENST00000621396 MTX1Q13505 466 aa19.75■□□□□ 0.75
CBWD3-216ENST00000621396 HSP90AB3PQ58FF7 597 aa19.75■□□□□ 0.75
CBWD3-216ENST00000621396 NUTM1Q86Y26 1132 aa19.75■□□□□ 0.75
CBWD3-216ENST00000621396 ZBTB38Q8NAP3 1195 aaPredicted RBP19.75■□□□□ 0.75
CBWD3-216ENST00000621396 BCL2L12Q9HB09 334 aa19.75■□□□□ 0.75
CBWD3-216ENST00000621396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.75■□□□□ 0.75
CBWD3-216ENST00000621396 NUP98P52948 1817 aa19.75■□□□□ 0.75
CBWD3-216ENST00000621396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.74■□□□□ 0.75
CBWD3-216ENST00000621396 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
CBWD3-216ENST00000621396 TSHZ3Q63HK5 1081 aa19.74■□□□□ 0.75
CBWD3-216ENST00000621396 RREB1Q92766 1687 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 OS9Q13438 667 aaPredicted RBP19.73■□□□□ 0.75
CBWD3-216ENST00000621396 TBC1D9BQ66K14 1250 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
CBWD3-216ENST00000621396 ZPR1O75312 459 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
CBWD3-216ENST00000621396 SLC27A3Q5K4L6 730 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 TRAPPC3LQ5T215 181 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 ZNF831Q5JPB2 1677 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 IBTKQ9P2D0 1353 aaPredicted RBP19.73■□□□□ 0.75
CBWD3-216ENST00000621396 TAF1LQ8IZX4 1826 aa19.73■□□□□ 0.75
CBWD3-216ENST00000621396 PCCAP05165 728 aaPredicted RBP19.72■□□□□ 0.75
CBWD3-216ENST00000621396 RFC4P35249 363 aa19.72■□□□□ 0.75
CBWD3-216ENST00000621396 CCDC24Q8N4L8 307 aa19.72■□□□□ 0.75
CBWD3-216ENST00000621396 LRRCC1Q9C099 1032 aa19.72■□□□□ 0.75
CBWD3-216ENST00000621396 HDAC5Q9UQL6 1122 aa19.72■□□□□ 0.75
CBWD3-216ENST00000621396 EN1Q05925 392 aaPredicted RBP19.72■□□□□ 0.75
CBWD3-216ENST00000621396 RABL6Q3YEC7 729 aaPredicted RBP19.72■□□□□ 0.75
CBWD3-216ENST00000621396 ZNF594Q96JF6 807 aaPredicted RBP19.72■□□□□ 0.75
CBWD3-216ENST00000621396 IRS4O14654 1257 aaPredicted RBP19.71■□□□□ 0.75
CBWD3-216ENST00000621396 PLSCR1O15162 318 aa19.71■□□□□ 0.75
CBWD3-216ENST00000621396 NARFQ9UHQ1 456 aa19.71■□□□□ 0.75
CBWD3-216ENST00000621396 SRCAPQ6ZRS2 3230 aa19.71■□□□□ 0.75
CBWD3-216ENST00000621396 ZNF827Q17R98 1081 aa19.7■□□□□ 0.74
CBWD3-216ENST00000621396 RHPN1Q8TCX5 695 aa19.7■□□□□ 0.74
CBWD3-216ENST00000621396 RFX5P48382 616 aaPredicted RBP19.7■□□□□ 0.74
CBWD3-216ENST00000621396 PTPN12Q05209 780 aaKnown RBP19.7■□□□□ 0.74
CBWD3-216ENST00000621396 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
CBWD3-216ENST00000621396 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
CBWD3-216ENST00000621396 EZH2Q15910 746 aaKnown RBP19.69■□□□□ 0.74
CBWD3-216ENST00000621396 PLEKHM2Q8IWE5 1019 aa19.69■□□□□ 0.74
CBWD3-216ENST00000621396 UTP14AQ9BVJ6 771 aaKnown RBP19.68■□□□□ 0.74
CBWD3-216ENST00000621396 TFCP2L1Q9NZI6 479 aa19.68■□□□□ 0.74
CBWD3-216ENST00000621396 SASH1O94885 1247 aa19.67■□□□□ 0.74
CBWD3-216ENST00000621396 CLEC4GQ6UXB4 293 aa19.67■□□□□ 0.74
CBWD3-216ENST00000621396 DEFB132Q7Z7B7 95 aa19.67■□□□□ 0.74
CBWD3-216ENST00000621396 GREM2Q9H772 168 aa19.67■□□□□ 0.74
CBWD3-216ENST00000621396 NOP58Q9Y2X3 529 aaKnown RBP19.67■□□□□ 0.74
CBWD3-216ENST00000621396 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
CBWD3-216ENST00000621396 MSH5O43196 834 aa19.66■□□□□ 0.74
CBWD3-216ENST00000621396 NTSR2O95665 410 aa19.66■□□□□ 0.74
CBWD3-216ENST00000621396 SH3TC1Q8TE82 1336 aa19.66■□□□□ 0.74
CBWD3-216ENST00000621396 G3BP1Q13283 466 aaKnown RBP eCLIP19.66■□□□□ 0.74
CBWD3-216ENST00000621396 TTLL11Q8NHH1 800 aa19.66■□□□□ 0.74
CBWD3-216ENST00000621396 ANKRD36CQ5JPF3 1778 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 C8orf34Q49A92 452 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 ERFEQ4G0M1 354 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 LRRC24Q50LG9 513 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 SETDB2Q96T68 719 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 PUS3Q9BZE2 481 aaKnown RBP19.65■□□□□ 0.74
CBWD3-216ENST00000621396 PARP10Q53GL7 1025 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 KIF1BPQ96EK5 621 aa19.65■□□□□ 0.74
CBWD3-216ENST00000621396 CCDC57Q2TAC2 916 aa19.64■□□□□ 0.74
CBWD3-216ENST00000621396 RAB11FIP3O75154 756 aa19.64■□□□□ 0.73
CBWD3-216ENST00000621396 GTF2E1P29083 439 aaPredicted RBP19.64■□□□□ 0.73
CBWD3-216ENST00000621396 CTSWP56202 376 aa19.64■□□□□ 0.73
CBWD3-216ENST00000621396 C3orf67Q6ZVT6 689 aa19.64■□□□□ 0.73
CBWD3-216ENST00000621396 COPRSQ9NQ92 184 aa19.64■□□□□ 0.73
CBWD3-216ENST00000621396 CDHR2Q9BYE9 1310 aa19.64■□□□□ 0.73
CBWD3-216ENST00000621396 GSPT1P15170 499 aaKnown RBP19.63■□□□□ 0.73
CBWD3-216ENST00000621396 BACH2Q9BYV9 841 aa19.63■□□□□ 0.73
CBWD3-216ENST00000621396 PDE8AO60658 829 aa19.63■□□□□ 0.73
CBWD3-216ENST00000621396 CSF1RP07333 972 aa19.63■□□□□ 0.73
CBWD3-216ENST00000621396 ITGA6P23229 1130 aa19.63■□□□□ 0.73
CBWD3-216ENST00000621396 UTRNP46939 3433 aa19.63■□□□□ 0.73
CBWD3-216ENST00000621396 GYS1P13807 737 aa19.62■□□□□ 0.73
CBWD3-216ENST00000621396 TFCP2Q12800 502 aa19.62■□□□□ 0.73
CBWD3-216ENST00000621396 NFIXQ14938 502 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms