RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 SLC35F4A4IF30 521 aa10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 P4HBP07237 508 aaKnown RBP10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 FMR1Q06787 632 aaKnown RBP eCLIP10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 DSC3Q14574 896 aa10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 COL19A1Q14993 1142 aa10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 EAPPQ56P03 285 aaPredicted RBP10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 TRIM47Q96LD4 638 aa10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 GGNBP2Q9H3C7 697 aa10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 GMPR2Q9P2T1 348 aaKnown RBP10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
LPCAT3-213ENST00000620843 A6NHS1 94 aa10.71□□□□□ -0.69
LPCAT3-213ENST00000620843 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
LPCAT3-213ENST00000620843 TAGLNQ01995 201 aaKnown RBP10.71□□□□□ -0.69
LPCAT3-213ENST00000620843 EHHADHQ08426 723 aa10.71□□□□□ -0.69
LPCAT3-213ENST00000620843 CMTR1Q8N1G2 835 aaKnown RBP10.71□□□□□ -0.69
LPCAT3-213ENST00000620843 NIF3L1Q9GZT8 377 aa10.71□□□□□ -0.69
LPCAT3-213ENST00000620843 UNCXA6NJT0 531 aa10.7□□□□□ -0.7
LPCAT3-213ENST00000620843 RPLP1P05386 114 aaKnown RBP10.7□□□□□ -0.7
LPCAT3-213ENST00000620843 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
LPCAT3-213ENST00000620843 ALKBH8Q96BT7 664 aaKnown RBP10.7□□□□□ -0.7
LPCAT3-213ENST00000620843 THBS1P07996 1170 aa10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 EPB42P16452 691 aa10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 GRNP28799 593 aaKnown RBP10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 MAPK8P45983 427 aa10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 LBRQ14739 615 aaKnown RBP10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 TRIP4Q15650 581 aaPredicted RBP10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 CCDC155Q8N6L0 562 aa10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 ZCCHC2Q9C0B9 1178 aaKnown RBP10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 BRD7Q9NPI1 651 aa10.69□□□□□ -0.7
LPCAT3-213ENST00000620843 NUCKS1Q9H1E3 243 aaKnown RBP10.68□□□□□ -0.7
LPCAT3-213ENST00000620843 KCNMB2Q9Y691 235 aa10.68□□□□□ -0.7
LPCAT3-213ENST00000620843 E9PSI1 815 aa10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 SNRPBP14678 240 aaKnown RBP10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 FIGNL1Q6PIW4 674 aa10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 Q6ZNB5 142 aa10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 CUEDC1Q9NWM3 386 aaPredicted RBP10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 FNDC3AQ9Y2H6 1198 aaKnown RBP10.67□□□□□ -0.7
LPCAT3-213ENST00000620843 H7C1W4 665 aa10.66□□□□□ -0.7
LPCAT3-213ENST00000620843 ATXN7O15265 892 aaPredicted RBP10.66□□□□□ -0.7
LPCAT3-213ENST00000620843 PCDHGC4Q9Y5F7 938 aa10.66□□□□□ -0.7
LPCAT3-213ENST00000620843 DCDC2BA2VCK2 349 aa10.65□□□□□ -0.7
LPCAT3-213ENST00000620843 FAM157BP0CG42 384 aa10.65□□□□□ -0.7
LPCAT3-213ENST00000620843 ORC1Q13415 861 aa10.65□□□□□ -0.7
LPCAT3-213ENST00000620843 DBN1Q16643 649 aa10.65□□□□□ -0.7
LPCAT3-213ENST00000620843 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
LPCAT3-213ENST00000620843 KHNYNO15037 678 aaKnown RBP10.64□□□□□ -0.71
LPCAT3-213ENST00000620843 XYLBO75191 536 aa10.64□□□□□ -0.71
LPCAT3-213ENST00000620843 LDHBP07195 334 aaKnown RBP10.64□□□□□ -0.71
LPCAT3-213ENST00000620843 UBAP2LQ14157 1087 aaKnown RBP10.64□□□□□ -0.71
LPCAT3-213ENST00000620843 ZNF438Q7Z4V0 828 aa10.64□□□□□ -0.71
LPCAT3-213ENST00000620843 MRRFQ96E11 262 aaKnown RBP10.64□□□□□ -0.71
LPCAT3-213ENST00000620843 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 ITGA6P23229 1130 aa10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 SFSWAPQ12872 951 aaKnown RBP10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 ENOX2Q16206 610 aaKnown RBP10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 PDE12Q6L8Q7 609 aaKnown RBP10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 WWC3Q9ULE0 1092 aa10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 KCNH4Q9UQ05 1017 aa10.63□□□□□ -0.71
LPCAT3-213ENST00000620843 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 LCE2BO14633 110 aa10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 EFSO43281 561 aa10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 XKR5Q6UX68 686 aa10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 ZNF837Q96EG3 531 aaPredicted RBP10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 CSRNP1Q96S65 589 aa10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 KIAA1522Q9P206 1035 aaPredicted RBP10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 FOXD3Q9UJU5 478 aaPredicted RBP10.62□□□□□ -0.71
LPCAT3-213ENST00000620843 EIF1AYO14602 144 aaKnown RBP10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 TNFRSF21O75509 655 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 NEFLP07196 543 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 MAPTP10636 758 aaKnown RBP10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 KCNQ4P56696 695 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 ATP2B2Q01814 1243 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 TNP2Q05952 138 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 TMEM63CQ9P1W3 806 aa10.61□□□□□ -0.71
LPCAT3-213ENST00000620843 BNIP3LO60238 219 aa10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 EGFRP00533 1210 aa10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 SNX29Q8TEQ0 813 aa10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 GTPBP3Q969Y2 492 aaKnown RBP10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 ABHD17AQ96GS6 310 aa10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 NDFIP2Q9NV92 336 aa10.6□□□□□ -0.71
LPCAT3-213ENST00000620843 GMCL1Q96IK5 515 aa10.59□□□□□ -0.71
LPCAT3-213ENST00000620843 DUSP9Q99956 384 aaKnown RBP10.59□□□□□ -0.71
LPCAT3-213ENST00000620843 C11orf16Q9NQ32 467 aa10.59□□□□□ -0.71
LPCAT3-213ENST00000620843 HCN2Q9UL51 889 aa10.59□□□□□ -0.71
LPCAT3-213ENST00000620843 CPNE3O75131 537 aaKnown RBP10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 FGD1P98174 961 aa10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 GRIN2CQ14957 1233 aa10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 NLRP13Q86W25 1043 aa10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 DNAJC25Q9H1X3 360 aa10.58□□□□□ -0.72
LPCAT3-213ENST00000620843 PPFIA3O75145 1194 aa10.57□□□□□ -0.72
LPCAT3-213ENST00000620843 PHACTR2O75167 634 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms