RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PROSER2Q86WR7 435 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-214ENST00000620676 NDUFAB1O14561 156 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 TLDC2A0PJX2 215 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 KMT5BQ4FZB7 885 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 ARID5AQ03989 594 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 BAIAP2L1Q9UHR4 511 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 FBLN1P23142 703 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 SESN3P58005 492 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 GNGT1P63211 74 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 FAM43BQ6ZT52 329 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-214ENST00000620676 GUCY2FP51841 1108 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 A0A1B0GUA9 196 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 KIF21BO75037 1637 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 CA8P35219 290 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 IGBP1P78318 339 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 FLIIQ13045 1269 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 GOLGA5Q8TBA6 731 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 MACROD2A1Z1Q3 448 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC6Q16204 474 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 GOLGA6CA6NDK9 693 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 GOLGA6DP0CG33 693 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 KCNV2Q8TDN2 545 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 GOLGA6AQ9NYA3 693 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 RAD50Q92878 1312 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 STX17P56962 302 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 MTX1Q13505 466 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 KCTD16Q68DU8 428 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 B4GALNT4Q76KP1 1039 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 KIF5BP33176 963 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 ABTB1Q969K4 478 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 DDX19AQ9NUU7 478 aaKnown RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 GGT6Q6P531 493 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 PPANQ9NQ55 473 aaKnown RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 EIF3CLB5ME19 914 aaKnown RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 EIF3CQ99613 913 aaKnown RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 E7EVH7 732 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 MRRFQ96E11 262 aaKnown RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 TRIM4Q9C037 500 aa5.78□□□□□ -1.48
VPS13D-214ENST00000620676 SCAND2PQ9GZW5 306 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-214ENST00000620676 GPRASP1Q5JY77 1395 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 MYO1CO00159 1063 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 CXorf56Q9H5V9 222 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 PPP6R1Q9UPN7 881 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 NINLQ9Y2I6 1382 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 PNMA6AP0CW24 399 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 FMNL3Q8IVF7 1028 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 MGARPQ8TDB4 240 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 SEC62Q99442 399 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 DHX16O60231 1041 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 CAVIN2O95810 425 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 ST5P78524 1137 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 RALYLQ86SE5 291 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 ZSCAN31Q96LW9 406 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 ZPR1O75312 459 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 POLD1P28340 1107 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 LRRFIP1Q32MZ4 808 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC30Q5VVM6 783 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 MCM10Q7L590 875 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 WDR66Q8TBY9 1149 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 MIPOL1Q8TD10 442 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 SUDS3Q9H7L9 328 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 PRPF4BQ13523 1007 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 SRGAP3O43295 1099 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 USP27XA6NNY8 438 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 UBLCP1Q8WVY7 318 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 UBAC1Q9BSL1 405 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 NUCKS1Q9H1E3 243 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 BOLA2Q9H3K6 86 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 NKTRP30414 1462 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 IFT88Q13099 833 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 SNCBQ16143 134 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 USHBP1Q8N6Y0 703 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 SMIM24O75264 130 aa5.77□□□□□ -1.49
VPS13D-214ENST00000620676 CCT6AP40227 531 aaKnown RBP5.77□□□□□ -1.49
VPS13D-214ENST00000620676 FKBP4Q02790 459 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 FBXW10Q5XX13 1052 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CUX2O14529 1486 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 GOLGA6BA6NDN3 693 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CLTAP09496 248 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 FAM204AQ9H8W3 233 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 SYCP1Q15431 976 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 ODF2LQ9ULJ1 636 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 KIRREL3Q8IZU9 778 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CTNNBL1Q8WYA6 563 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 TMEM110-MUSTN1A8MSY1 372 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CHST3Q7LGC8 479 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 PARD6BQ9BYG5 372 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 MAP3K1Q13233 1512 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 STIM1Q13586 685 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CDK5RAP3Q96JB5 506 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 PLEKHH1Q9ULM0 1364 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 PFDN1O60925 122 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 GNAI1P63096 354 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 BAG1Q99933 345 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 KCNK9Q9NPC2 374 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.76□□□□□ -1.491e-6■■■■■ 109.1
VPS13D-214ENST00000620676 ADKP55263 362 aaKnown RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 POLE2P56282 527 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms