RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 SPON1Q9HCB6 807 aa17.32■□□□□ 0.36
NEK3-210ENST00000620675 NTSR2O95665 410 aa17.32■□□□□ 0.36
NEK3-210ENST00000620675 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
NEK3-210ENST00000620675 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
NEK3-210ENST00000620675 TAF1P21675 1872 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 ABCC12Q96J65 1359 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 PRR5LQ6MZQ0 368 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 LINS1Q8NG48 757 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
NEK3-210ENST00000620675 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
NEK3-210ENST00000620675 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
NEK3-210ENST00000620675 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
NEK3-210ENST00000620675 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
NEK3-210ENST00000620675 NBPF5PQ86XG9 351 aaPredicted RBP17.3■□□□□ 0.36
NEK3-210ENST00000620675 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
NEK3-210ENST00000620675 MYH3P11055 1940 aa17.3■□□□□ 0.36
NEK3-210ENST00000620675 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
NEK3-210ENST00000620675 ERFEQ4G0M1 354 aa17.3■□□□□ 0.36
NEK3-210ENST00000620675 GCKRQ14397 625 aa17.29■□□□□ 0.36
NEK3-210ENST00000620675 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
NEK3-210ENST00000620675 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
NEK3-210ENST00000620675 CWC25Q9NXE8 425 aaPredicted RBP17.29■□□□□ 0.36
NEK3-210ENST00000620675 TRMT112Q9UI30 125 aaKnown RBP17.29■□□□□ 0.36
NEK3-210ENST00000620675 COL11A2P13942 1736 aaPredicted RBP17.29■□□□□ 0.36
NEK3-210ENST00000620675 POLD1P28340 1107 aa17.28■□□□□ 0.36
NEK3-210ENST00000620675 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
NEK3-210ENST00000620675 DZIP1LQ8IYY4 767 aaKnown RBP17.28■□□□□ 0.36
NEK3-210ENST00000620675 KIAA1551Q9HCM1 1747 aa17.28■□□□□ 0.36
NEK3-210ENST00000620675 C3orf67Q6ZVT6 689 aa17.28■□□□□ 0.36
NEK3-210ENST00000620675 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
NEK3-210ENST00000620675 UTP14AQ9BVJ6 771 aaKnown RBP17.28■□□□□ 0.36
NEK3-210ENST00000620675 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
NEK3-210ENST00000620675 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.36
NEK3-210ENST00000620675 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.36
NEK3-210ENST00000620675 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.35
NEK3-210ENST00000620675 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.35
NEK3-210ENST00000620675 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.35
NEK3-210ENST00000620675 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.35
NEK3-210ENST00000620675 LRP5O75197 1615 aa17.26■□□□□ 0.35
NEK3-210ENST00000620675 CASP7P55210 303 aa17.26■□□□□ 0.35
NEK3-210ENST00000620675 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
NEK3-210ENST00000620675 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
NEK3-210ENST00000620675 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
NEK3-210ENST00000620675 PPP1R1BQ9UD71 204 aaPredicted RBP17.26■□□□□ 0.35
NEK3-210ENST00000620675 C10orf71Q711Q0 1435 aa17.26■□□□□ 0.35
NEK3-210ENST00000620675 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
NEK3-210ENST00000620675 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
NEK3-210ENST00000620675 H7C1W4 665 aa17.25■□□□□ 0.35
NEK3-210ENST00000620675 NPHP1O15259 732 aa17.25■□□□□ 0.35
NEK3-210ENST00000620675 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
NEK3-210ENST00000620675 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
NEK3-210ENST00000620675 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
NEK3-210ENST00000620675 MEIS3Q99687 375 aa17.25■□□□□ 0.35
NEK3-210ENST00000620675 COL4A1P02462 1669 aa17.24■□□□□ 0.35
NEK3-210ENST00000620675 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
NEK3-210ENST00000620675 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
NEK3-210ENST00000620675 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
NEK3-210ENST00000620675 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
NEK3-210ENST00000620675 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
NEK3-210ENST00000620675 GRM8O00222 908 aa17.24■□□□□ 0.35
NEK3-210ENST00000620675 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
NEK3-210ENST00000620675 IRS4O14654 1257 aaPredicted RBP17.23■□□□□ 0.35
NEK3-210ENST00000620675 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
NEK3-210ENST00000620675 EPHA10Q5JZY3 1008 aa17.23■□□□□ 0.35
NEK3-210ENST00000620675 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
NEK3-210ENST00000620675 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
NEK3-210ENST00000620675 BRCA1P38398 1863 aaKnown RBP17.23■□□□□ 0.35
NEK3-210ENST00000620675 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
NEK3-210ENST00000620675 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
NEK3-210ENST00000620675 CHRNA5P30532 468 aa17.22■□□□□ 0.35
NEK3-210ENST00000620675 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
NEK3-210ENST00000620675 SUCLG2Q96I99 432 aa17.22■□□□□ 0.35
NEK3-210ENST00000620675 WWC3Q9ULE0 1092 aa17.22■□□□□ 0.35
NEK3-210ENST00000620675 DLEC1Q9Y238 1755 aa17.21■□□□□ 0.35
NEK3-210ENST00000620675 ST5P78524 1137 aa17.21■□□□□ 0.35
NEK3-210ENST00000620675 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
NEK3-210ENST00000620675 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
NEK3-210ENST00000620675 UTYO14607 1347 aa17.21■□□□□ 0.34
NEK3-210ENST00000620675 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
NEK3-210ENST00000620675 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
NEK3-210ENST00000620675 SLC10A5Q5PT55 438 aa17.2■□□□□ 0.34
NEK3-210ENST00000620675 SLC51AQ86UW1 340 aa17.2■□□□□ 0.34
NEK3-210ENST00000620675 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
NEK3-210ENST00000620675 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
NEK3-210ENST00000620675 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
NEK3-210ENST00000620675 A0A0G2JLW4 131 aa17.19■□□□□ 0.34
NEK3-210ENST00000620675 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
NEK3-210ENST00000620675 SLX4Q8IY92 1834 aa17.19■□□□□ 0.34
NEK3-210ENST00000620675 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
NEK3-210ENST00000620675 FOXO4P98177 505 aa17.19■□□□□ 0.34
NEK3-210ENST00000620675 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
NEK3-210ENST00000620675 DPEP1P16444 411 aa17.17■□□□□ 0.34
NEK3-210ENST00000620675 KCNA3P22001 575 aa17.17■□□□□ 0.34
NEK3-210ENST00000620675 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
NEK3-210ENST00000620675 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
NEK3-210ENST00000620675 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
NEK3-210ENST00000620675 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
NEK3-210ENST00000620675 SYT17Q9BSW7 474 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms