RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 MACROD2A1Z1Q3 448 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 TRIM27P14373 513 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 CKAP2LQ8IYA6 745 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 CCDC102AQ96A19 550 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 PLS1Q14651 629 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 CCDC183Q5T5S1 534 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
AGRN-210ENST00000620552 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
AGRN-210ENST00000620552 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.26e-7■■■■□ 20.5
AGRN-210ENST00000620552 GJB2P29033 226 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
AGRN-210ENST00000620552 TCERG1LQ5VWI1 586 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 AMPD3Q01432 767 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
AGRN-210ENST00000620552 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 NCOA7Q8NI08 942 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.26e-7■□□□□ 9.6
AGRN-210ENST00000620552 CYP7A1P22680 504 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
AGRN-210ENST00000620552 TTC16Q8NEE8 873 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 CPLX3Q8WVH0 158 aa16.29■□□□□ 0.2
AGRN-210ENST00000620552 NSD2O96028 1365 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
AGRN-210ENST00000620552 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 CTNNA2P26232 953 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 MCM4P33991 863 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 IFIT1BQ5T764 474 aaKnown RBP16.28■□□□□ 0.2
AGRN-210ENST00000620552 OGFOD1Q8N543 542 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
AGRN-210ENST00000620552 DDB1Q16531 1140 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 FSIP1Q8NA03 581 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 GOLGA6L7A0A1B0GV03 622 aa16.28■□□□□ 0.2
AGRN-210ENST00000620552 KIF20AO95235 890 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 RBM26Q5T8P6 1007 aaKnown RBP16.27■□□□□ 0.2
AGRN-210ENST00000620552 CCDC91Q7Z6B0 441 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 SKAP1Q86WV1 359 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
AGRN-210ENST00000620552 UQCRHLA0A096LP55 91 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 UQCRHP07919 91 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 SLC4A4Q9Y6R1 1079 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 DISP3Q9P2K9 1392 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 KIF5CO60282 957 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 CALRP27797 417 aaKnown RBP16.27■□□□□ 0.2
AGRN-210ENST00000620552 CETN1Q12798 172 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 PSMD1Q99460 953 aa16.27■□□□□ 0.2
AGRN-210ENST00000620552 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
AGRN-210ENST00000620552 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 NPHP3Q7Z494 1330 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 CCDC40Q4G0X9 1142 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 DYDC1Q8WWB3 177 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 NLRP3Q96P20 1036 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 NEK1Q96PY6 1258 aa16.27■□□□□ 0.19
AGRN-210ENST00000620552 VEZTQ9HBM0 779 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 C11orf95C9JLR9 678 aaPredicted RBP16.26■□□□□ 0.19
AGRN-210ENST00000620552 PRC1O43663 620 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 IDEP14735 1019 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 BIN1O00499 593 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
AGRN-210ENST00000620552 STXBP4Q6ZWJ1 553 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 SIRT1Q96EB6 747 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 TFCP2L1Q9NZI6 479 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■□□ 16.4
AGRN-210ENST00000620552 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
AGRN-210ENST00000620552 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
AGRN-210ENST00000620552 WTAPQ15007 396 aa16.25■□□□□ 0.19
AGRN-210ENST00000620552 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
AGRN-210ENST00000620552 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
AGRN-210ENST00000620552 TTC21AQ8NDW8 1320 aa16.25■□□□□ 0.19
AGRN-210ENST00000620552 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
AGRN-210ENST00000620552 CCDC66A2RUB6 948 aa16.25■□□□□ 0.19
AGRN-210ENST00000620552 BCCIPQ9P287 314 aaKnown RBP eCLIP16.25■□□□□ 0.19
AGRN-210ENST00000620552 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
AGRN-210ENST00000620552 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 ANKRD36BQ8N2N9 1353 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 ZSCAN12O43309 604 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 POLD1P28340 1107 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 CLIP2Q9UDT6 1046 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 RTCBQ9Y3I0 505 aaKnown RBP16.24■□□□□ 0.19
AGRN-210ENST00000620552 COMMD10Q9Y6G5 202 aa16.24■□□□□ 0.19
AGRN-210ENST00000620552 NCKAP5LQ9HCH0 1330 aa16.23■□□□□ 0.19
AGRN-210ENST00000620552 DUOX2Q9NRD8 1548 aa16.23■□□□□ 0.19
AGRN-210ENST00000620552 MCM5P33992 734 aa16.23■□□□□ 0.19
AGRN-210ENST00000620552 CTAGE5O15320 804 aa16.23■□□□□ 0.19
AGRN-210ENST00000620552 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
AGRN-210ENST00000620552 UBA7P41226 1012 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms