RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CWF19L2Q2TBE0 894 aaKnown RBP10.1□□□□□ -0.79
CPNE3-209ENST00000620393 ZNF579Q8NAF0 562 aaKnown RBP10.1□□□□□ -0.79
CPNE3-209ENST00000620393 CCDC191Q8NCU4 936 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 MEIS3Q99687 375 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 TFCP2L1Q9NZI6 479 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 COL15A1P39059 1388 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 IBTKQ9P2D0 1353 aaPredicted RBP10.1□□□□□ -0.79
CPNE3-209ENST00000620393 ZNF831Q5JPB2 1677 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
CPNE3-209ENST00000620393 ZPR1O75312 459 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 ZNF34Q8IZ26 560 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 FLAD1Q8NFF5 587 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 UPF1Q92900 1129 aaKnown RBP eCLIP10.09□□□□□ -0.79
CPNE3-209ENST00000620393 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-209ENST00000620393 C9orf78Q9NZ63 289 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-209ENST00000620393 HDAC5Q9UQL6 1122 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 ZNF652Q9Y2D9 606 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
CPNE3-209ENST00000620393 UTYO14607 1347 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 TJP1Q07157 1748 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 H7C1W4 665 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 GRM8O00222 908 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 PHF14O94880 888 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 GNAI2P04899 355 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 NBPF7P0C2Y1 421 aaPredicted RBP10.08□□□□□ -0.8
CPNE3-209ENST00000620393 SLC15A2Q16348 729 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 USPL1Q5W0Q7 1092 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
CPNE3-209ENST00000620393 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-209ENST00000620393 EP400Q96L91 3159 aa10.07□□□□□ -0.8
CPNE3-209ENST00000620393 CACNA1FO60840 1977 aa10.07□□□□□ -0.8
CPNE3-209ENST00000620393 UBTFL1P0CB47 393 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-209ENST00000620393 PARP10Q53GL7 1025 aa10.07□□□□□ -0.8
CPNE3-209ENST00000620393 NLRP10Q86W26 655 aa10.07□□□□□ -0.8
CPNE3-209ENST00000620393 COL23A1Q86Y22 540 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-209ENST00000620393 RPAP2Q8IXW5 612 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-209ENST00000620393 STK32BQ9NY57 414 aa10.07□□□□□ -0.8
CPNE3-209ENST00000620393 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
CPNE3-209ENST00000620393 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
CPNE3-209ENST00000620393 LAMB4A4D0S4 1761 aa10.06□□□□□ -0.8
CPNE3-209ENST00000620393 GPTP24298 496 aa10.06□□□□□ -0.8
CPNE3-209ENST00000620393 CASP7P55210 303 aa10.06□□□□□ -0.8
CPNE3-209ENST00000620393 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
CPNE3-209ENST00000620393 ZBTB38Q8NAP3 1195 aaPredicted RBP10.06□□□□□ -0.8
CPNE3-209ENST00000620393 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
CPNE3-209ENST00000620393 NIP7Q9Y221 180 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE3-209ENST00000620393 LY75O60449 1722 aa10.06□□□□□ -0.8
CPNE3-209ENST00000620393 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 PCCAP05165 728 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 GYS1P13807 737 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 ATP8B2P98198 1209 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 B4GALNT3Q6L9W6 998 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 PPP1R42Q7Z4L9 355 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 JARID2Q92833 1246 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 SETDB2Q96T68 719 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 RWDD1Q9H446 243 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 ANO8Q9HCE9 1232 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
CPNE3-209ENST00000620393 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
CPNE3-209ENST00000620393 RREB1Q92766 1687 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 IGHDP01880 384 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 TM4SF1P30408 202 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
CPNE3-209ENST00000620393 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 UBE3BQ7Z3V4 1068 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 NLGN1Q8N2Q7 840 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 KAZALD1Q96I82 304 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 SUCLG2Q96I99 432 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
CPNE3-209ENST00000620393 UBN2Q6ZU65 1347 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
CPNE3-209ENST00000620393 C4BP0C0L5 1744 aa10.03□□□□□ -0.8
CPNE3-209ENST00000620393 NFIXQ14938 502 aa10.03□□□□□ -0.8
CPNE3-209ENST00000620393 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
CPNE3-209ENST00000620393 PLA2G12BQ9BX93 195 aa10.03□□□□□ -0.8
CPNE3-209ENST00000620393 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.8
CPNE3-209ENST00000620393 IRS4O14654 1257 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-209ENST00000620393 HMMRO75330 724 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 NTSR2O95665 410 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
CPNE3-209ENST00000620393 FOXO4P98177 505 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 MTX1Q13505 466 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-209ENST00000620393 EPHA10Q5JZY3 1008 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 SLC10A5Q5PT55 438 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 TPTE2Q6XPS3 522 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 SYNE4Q8N205 404 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 NYXQ9GZU5 481 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 ZBTB47Q9UFB7 747 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-209ENST00000620393 SH3TC1Q8TE82 1336 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms