RNA–Protein interactions for RNA: ENST00000619939.4

LHX1-204, Transcript of LIM homeobox 1, humanhuman

TSL 2

Gene LHX1, Length 1,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-204ENST00000619939 GNAI2P04899 355 aa18.97■□□□□ 0.63
LHX1-204ENST00000619939 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
LHX1-204ENST00000619939 INTS5Q6P9B9 1019 aaKnown RBP18.97■□□□□ 0.63
LHX1-204ENST00000619939 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
LHX1-204ENST00000619939 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
LHX1-204ENST00000619939 TGFB2P61812 414 aa18.97■□□□□ 0.63
LHX1-204ENST00000619939 MMP10P09238 476 aa18.96■□□□□ 0.63
LHX1-204ENST00000619939 RFC4P35249 363 aa18.96■□□□□ 0.63
LHX1-204ENST00000619939 HDAC1Q13547 482 aaPredicted RBP18.96■□□□□ 0.63
LHX1-204ENST00000619939 IGKV5-2P06315 115 aa18.95■□□□□ 0.62
LHX1-204ENST00000619939 MYH14Q7Z406 1995 aaKnown RBP18.95■□□□□ 0.62
LHX1-204ENST00000619939 NEURL1BA8MQ27 555 aa18.95■□□□□ 0.62
LHX1-204ENST00000619939 EIF5P55010 431 aaKnown RBP18.95■□□□□ 0.62
LHX1-204ENST00000619939 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
LHX1-204ENST00000619939 RPAP2Q8IXW5 612 aaPredicted RBP18.95■□□□□ 0.62
LHX1-204ENST00000619939 ARHGEF1Q92888 912 aaKnown RBP18.95■□□□□ 0.62
LHX1-204ENST00000619939 MAP3K15Q6ZN16 1313 aa18.94■□□□□ 0.62
LHX1-204ENST00000619939 ATP5J2-PTCD1G3V325 749 aa18.94■□□□□ 0.62
LHX1-204ENST00000619939 NBPF7P0C2Y1 421 aaPredicted RBP18.94■□□□□ 0.62
LHX1-204ENST00000619939 HDAC5Q9UQL6 1122 aa18.94■□□□□ 0.62
LHX1-204ENST00000619939 SMIM5Q71RC9 77 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 TBC1D2BQ9UPU7 963 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 AFDNP55196 1824 aaKnown RBP18.93■□□□□ 0.62
LHX1-204ENST00000619939 GRM8O00222 908 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 GCKRQ14397 625 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 CEP85Q6P2H3 762 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 ANKRD44Q8N8A2 993 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
LHX1-204ENST00000619939 PARP3Q9Y6F1 533 aa18.93■□□□□ 0.62
LHX1-204ENST00000619939 GIGYF2Q6Y7W6 1299 aaKnown RBP18.91■□□□□ 0.62
LHX1-204ENST00000619939 GYS1P13807 737 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 GPBP1L1Q9HC44 474 aaPredicted RBP18.9■□□□□ 0.62
LHX1-204ENST00000619939 COL15A1P39059 1388 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 IBTKQ9P2D0 1353 aaPredicted RBP18.9■□□□□ 0.62
LHX1-204ENST00000619939 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 HMMRO75330 724 aa18.9■□□□□ 0.62
LHX1-204ENST00000619939 CWC25Q9NXE8 425 aaPredicted RBP18.9■□□□□ 0.62
LHX1-204ENST00000619939 A0A087WZG4 1122 aa18.89■□□□□ 0.61
LHX1-204ENST00000619939 CCDC191Q8NCU4 936 aa18.89■□□□□ 0.61
LHX1-204ENST00000619939 UTYO14607 1347 aa18.88■□□□□ 0.61
LHX1-204ENST00000619939 HLFQ16534 295 aa18.88■□□□□ 0.61
LHX1-204ENST00000619939 KIF13BQ9NQT8 1826 aa18.88■□□□□ 0.61
LHX1-204ENST00000619939 UTRNP46939 3433 aa18.88■□□□□ 0.61
LHX1-204ENST00000619939 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
LHX1-204ENST00000619939 C10orf71Q711Q0 1435 aa18.87■□□□□ 0.61
LHX1-204ENST00000619939 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
LHX1-204ENST00000619939 UBE3BQ7Z3V4 1068 aa18.87■□□□□ 0.61
LHX1-204ENST00000619939 GCC1Q96CN9 775 aa18.87■□□□□ 0.61
LHX1-204ENST00000619939 NUP98P52948 1817 aa18.86■□□□□ 0.61
LHX1-204ENST00000619939 SMC5Q8IY18 1101 aa18.86■□□□□ 0.61
LHX1-204ENST00000619939 TRIM28Q13263 835 aaKnown RBP18.86■□□□□ 0.61
LHX1-204ENST00000619939 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
LHX1-204ENST00000619939 CAMTA2O94983 1202 aa18.85■□□□□ 0.61
LHX1-204ENST00000619939 GPTP24298 496 aa18.85■□□□□ 0.61
LHX1-204ENST00000619939 JARID2Q92833 1246 aaPredicted RBP18.85■□□□□ 0.61
LHX1-204ENST00000619939 C4AP0C0L4 1744 aa18.85■□□□□ 0.61
LHX1-204ENST00000619939 ANKRD36CQ5JPF3 1778 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
LHX1-204ENST00000619939 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 ZPR1O75312 459 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 H7C1W4 665 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 RTL5Q5HYW3 569 aaPredicted RBP18.84■□□□□ 0.61
LHX1-204ENST00000619939 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 BCS1LQ9Y276 419 aa18.84■□□□□ 0.61
LHX1-204ENST00000619939 A0A0G2JLW4 131 aa18.83■□□□□ 0.6
LHX1-204ENST00000619939 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
LHX1-204ENST00000619939 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.6
LHX1-204ENST00000619939 NLRP10Q86W26 655 aa18.82■□□□□ 0.6
LHX1-204ENST00000619939 SKAP1Q86WV1 359 aa18.82■□□□□ 0.6
LHX1-204ENST00000619939 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
LHX1-204ENST00000619939 DPEP1P16444 411 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 ZNF34Q8IZ26 560 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 KAZALD1Q96I82 304 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
LHX1-204ENST00000619939 RGS3P49796 1198 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 CASP7P55210 303 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 MTX1Q13505 466 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 CLEC4GQ6UXB4 293 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 NARFQ9UHQ1 456 aa18.81■□□□□ 0.6
LHX1-204ENST00000619939 BCORQ6W2J9 1755 aa18.8■□□□□ 0.6
LHX1-204ENST00000619939 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
LHX1-204ENST00000619939 TM4SF1P30408 202 aa18.8■□□□□ 0.6
LHX1-204ENST00000619939 ARHGAP27Q6ZUM4 889 aa18.8■□□□□ 0.6
LHX1-204ENST00000619939 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
LHX1-204ENST00000619939 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
LHX1-204ENST00000619939 TRMT112Q9UI30 125 aaKnown RBP18.79■□□□□ 0.6
LHX1-204ENST00000619939 WWC3Q9ULE0 1092 aa18.79■□□□□ 0.6
LHX1-204ENST00000619939 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
LHX1-204ENST00000619939 NUCB1Q02818 461 aa18.79■□□□□ 0.6
LHX1-204ENST00000619939 POLA2Q14181 598 aa18.79■□□□□ 0.6
LHX1-204ENST00000619939 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
LHX1-204ENST00000619939 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms