RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 PROSER3Q2NL68 480 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 RTF1Q92541 710 aaKnown RBP9.51□□□□□ -0.89
CHD7-212ENST00000618450 SPEF2Q9C093 1822 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 PI4KAP2A4QPH2 592 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 CASTP20810 708 aaKnown RBP9.51□□□□□ -0.89
CHD7-212ENST00000618450 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
CHD7-212ENST00000618450 PI4KAP1Q8N8J0 262 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
CHD7-212ENST00000618450 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 SURF6O75683 361 aaKnown RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 CWC27Q6UX04 472 aaKnown RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 DNAAF4Q8WXU2 420 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 SALL1Q9NSC2 1324 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 CREB3L3Q68CJ9 461 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 CNTROBQ8N137 903 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 EAF2Q96CJ1 260 aaPredicted RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 SLC27A2O14975 620 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 IQCB1Q15051 598 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 HDGFL1Q5TGJ6 251 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 IP6K1Q92551 441 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 NECTIN2Q92692 538 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 FAM227BQ96M60 508 aa9.5□□□□□ -0.89
CHD7-212ENST00000618450 TLR7Q9NYK1 1049 aaKnown RBP9.5□□□□□ -0.89
CHD7-212ENST00000618450 KIF1AQ12756 1690 aa9.49□□□□□ -0.89
CHD7-212ENST00000618450 RFX5P48382 616 aaPredicted RBP9.49□□□□□ -0.89
CHD7-212ENST00000618450 SYCP1Q15431 976 aa9.49□□□□□ -0.89
CHD7-212ENST00000618450 TDRD7Q8NHU6 1098 aaKnown RBP9.49□□□□□ -0.89
CHD7-212ENST00000618450 AGXT2Q9BYV1 514 aa9.49□□□□□ -0.89
CHD7-212ENST00000618450 A0A0D9SFI3 127 aa9.49□□□□□ -0.89
CHD7-212ENST00000618450 SHANK3Q9BYB0 1731 aa9.49□□□□□ -0.89
CHD7-212ENST00000618450 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
CHD7-212ENST00000618450 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
CHD7-212ENST00000618450 CCDC83Q8IWF9 413 aa9.49□□□□□ -0.89
CHD7-212ENST00000618450 ZSCAN31Q96LW9 406 aaPredicted RBP9.49□□□□□ -0.89
CHD7-212ENST00000618450 IGKV5-2P06315 115 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 RESTQ13127 1097 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 ZNF589Q86UQ0 364 aaPredicted RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 ECHDC1Q9NTX5 307 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 RFX7Q2KHR2 1363 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 ZNF609O15014 1411 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 RIOK3O14730 519 aaKnown RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 NCBP1Q09161 790 aaKnown RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 SNW1Q13573 536 aaKnown RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 NUTM2FA1L443 756 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 ALDH1L1O75891 902 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 ILDR1Q86SU0 546 aaPredicted RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 MPNDQ8N594 471 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 EVI5LQ96CN4 794 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 RBM8AQ9Y5S9 174 aaKnown RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 RBM6P78332 1123 aaKnown RBP9.48□□□□□ -0.89
CHD7-212ENST00000618450 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 SLC26A8Q96RN1 970 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 PDRG1Q9NUG6 133 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
CHD7-212ENST00000618450 KDM6AO15550 1401 aaPredicted RBP9.47□□□□□ -0.89
CHD7-212ENST00000618450 RPS6KB1P23443 525 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 CDC25BP30305 580 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 CCDC144BQ3MJ40 725 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
CHD7-212ENST00000618450 SARM1Q6SZW1 724 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 CCDC144CPQ8IYA2 1237 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 ENGASEQ8NFI3 743 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 PA2G4Q9UQ80 394 aaKnown RBP9.47□□□□□ -0.89
CHD7-212ENST00000618450 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 TAF5LO75529 589 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 CTDNEP1O95476 244 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 NYAP1Q6ZVC0 841 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 NECAB1Q8N987 351 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 TYRO3Q06418 890 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 NMIQ13287 307 aaPredicted RBP9.47□□□□□ -0.89
CHD7-212ENST00000618450 CYB5RLQ6IPT4 315 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 LEO1Q8WVC0 666 aaPredicted RBP9.47□□□□□ -0.89
CHD7-212ENST00000618450 SUCLG2Q96I99 432 aa9.47□□□□□ -0.89
CHD7-212ENST00000618450 PALLDQ8WX93 1383 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 FIBPO43427 364 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 CASP7P55210 303 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 JAKMIP1Q96N16 626 aaKnown RBP9.46□□□□□ -0.89
CHD7-212ENST00000618450 CLSTN2Q9H4D0 955 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 COL22A1Q8NFW1 1626 aaPredicted RBP9.46□□□□□ -0.89
CHD7-212ENST00000618450 NR1I2O75469 434 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.89
CHD7-212ENST00000618450 PLPPR3Q6T4P5 718 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 LUZP1Q86V48 1076 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 SMC3Q9UQE7 1217 aa9.46□□□□□ -0.89
CHD7-212ENST00000618450 MYH7P12883 1935 aa9.46□□□□□ -0.9
CHD7-212ENST00000618450 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.9
CHD7-212ENST00000618450 CHGBP05060 677 aa9.45□□□□□ -0.9
CHD7-212ENST00000618450 AMPHP49418 695 aa9.45□□□□□ -0.9
CHD7-212ENST00000618450 EPHA10Q5JZY3 1008 aa9.45□□□□□ -0.9
CHD7-212ENST00000618450 ZSCAN25Q6NSZ9 544 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms